Import, export, and recycling of dissolved nutrients in the Ogeechee River estuary (Georgia, USA)

We constructed an empirical mass balance model of nutrient fluxes in the Ogeechee River estuary (Georgia, USA) from eight surveys of seasonal estuarine nutrient concentrations during 2015 and 2016. The model results indicated a net removal of dissolved phosphorus and a net production of dissolved nitrogen (N) within the estuary over an annual cycle. During summer and autumn low flow periods, much of the dissolved N discharged to the ocean seems to be recycled into the estuary in the form of phytoplankton biomass. As a result, the outwelled N is not new nitrogen fueling coastal production but is nitrogen trapped within a recycling loop across the ocean–estuarine boundary. Higher flows in the fall and winter lead to direct discharge of nutrients with minimal recycling. A balanced N budget for the Ogeechee River estuary requires that estuarine N-fixation must exceed burial and denitrification losses within the estuary

Forcing and Dynamics of Seafloor-Water Column Exchange on a Broad Continental Shelf

Relict sediments of elevated permeability characterize the majority of continental shelves globally (Emery, 1968). In these settings, interactions between benthic boundary layer (BBL) flows and seabed topography generate pressure fluctuations that drive advective and dispersive porewater transport, dramatically increasing the magnitude and variability of porewater solute and particulate exchange across the sediment-water interface (Huettel et al., 1996; Huettel and Rusch, 2000). On broad shallow shelves with a relatively large area-to-volume ratio, the seafloor’s role is magnified. Energetic events may reorganize bedforms across a significant fraction of the shelf, leading to altered exchange dynamics that may persist long after the organizing event. Ecosystem-based management of both resources and environmental status requires improved fundamental understanding of dynamic benthic exchange processes. Scattered, short-time-scale observations are unlikely to capture the full spectrum of events that affect sediment-water exchanges; a persistent observational presence on the seafloor is required

Characterisation of the muon beams for the Muon Ionisation Cooling Experiment

A novel single-particle technique to measure emittance has been developed and used to characterise seventeen different muon beams for the Muon Ionisation Cooling Experiment (MICE). The muon beams, whose mean momenta vary from 171 to 281 MeV/c, have emittances of approximately 1.2–2.3 π mm-rad horizontally and 0.6–1.0 π mm-rad vertically, a horizontal dispersion of 90–190 mm and momentum spreads of about 25 MeV/c. There is reasonable agreement between the measured parameters of the beams and the results of simulations. The beams are found to meet the requirements of MICE

Western Boundary Current-Subtropical Continental Shelf Interactions

Western boundary currents (WBCs) adjacent to subtropical continental shelves (STCSs; between ~25° and 35° latitude; Figure 1) transport heat, nutrients, and biota poleward along the western margins of major ocean basins, interacting with the continental margins and influencing their physics and biology. Eddies and meanders along the shelf edge upwell deep, nutrient-laden water that can be advected onto the adjacent shelves with a corresponding export of particle-rich shelf water (e.g., Lee et al., 1991; Kimura et al., 1997; Campos et al., 2000; Roughan and Middleton, 2002, 2004; Lutjeharms, 2006; Savidge and Savidge, 2014). Despite their similarities, the various STCS regions display key differences with respect to boundary current strength and variability, shelf width and geometry, and trophic structure. Comparative analyses of the physical forcing and biological responses among STCS have the potential to reveal common underlying properties, forcing mechanisms, and sensitivities to climatic perturbations that are not possible to elucidate with region-specific studies. This kind of fundamental understanding of relationships between physics and biological responses is critical to predicting consequences of environmental change across a wide range of spatiotemporal scales

Electron-muon ranger: performance in the MICE muon beam

The Muon Ionization Cooling Experiment (MICE) will perform a detailed study of ionization cooling to evaluate the feasibility of the technique. To carry out this program, MICE requires an efficient particle-identification (PID) system to identify muons. The Electron-Muon Ranger (EMR) is a fully-active tracking-calorimeter that forms part of the PID system and tags muons that traverse the cooling channel without decaying. The detector is capable of identifying electrons with an efficiency of 98.6%, providing a purity for the MICE beam that exceeds 99.8%. The EMR also proved to be a powerful tool for the reconstruction of muon momenta in the range 100–280 MeV/c

Electron-muon ranger: performance in the MICE muon beam

The Muon Ionization Cooling Experiment (MICE) will perform a detailed study of ionization cooling to evaluate the feasibility of the technique. To carry out this program, MICE requires an efficient particle-identification (PID) system to identify muons. The Electron-Muon Ranger (EMR) is a fully-active tracking-calorimeter that forms part of the PID system and tags muons that traverse the cooling channel without decaying. The detector is capable of identifying electrons with an efficiency of 98.6%, providing a purity for the MICE beam that exceeds 99.8%. The EMR also proved to be a powerful tool for the reconstruction of muon momenta in the range 100–280 MeV/c

Wintertime polynya structure and variability from thermal remote sensing and seal-borne observations at Pine Island Glacier, West Antarctica

Funding: This work was enabled by the NSF-NERC International Thwaites Glacier Collaboration: Thwaites-Amundsen Regional Survey and Network (ITGC: TARSAN; NERC Grant: NE/S006419/1, NE/S006591/1, NSF Grant: 1738992) and the NERC Ice Sheet Stability Programme (iSTAR; NERC Grant: NE/J005703/1).Antarctica’s ice shelves play a critical role in modulating ice loss to the ocean by buttressing grounded ice upstream. With the potential to impact ice-shelf stability, persistent polynyas (open-water areas surrounded by sea ice, persisting for multiple years at the same location) at the edge of many ice-shelf fronts, are maintained by winds and/or ocean heat, and are locations of strong ice-ocean-atmosphere interactions. However, in situ observations of polynyas are sparse due to the logistical constraints of collecting Antarctic field measurements. Here, we used wintertime (May–August) temperature and salinity observations derived from seal-borne tags deployed in 2014, 2019, and 2020, in conjunction with thermal imagery from the MODerate resolution Imaging Spectroradiometer (MODIS) and the Landsat 8 Thermal Infrared Sensor (TIRS) to investigate the spatial, temporal, and thermal structural variability of polynyas near Pine Island Glacier (PIG). Across the three winters considered, there were 148 anomalously warm (>3σ from background) seal dives near the PIG ice front, including 24 dives that coincided with MODIS images with minimal cloud cover that also showed a warm surface temperature anomaly. These warm surface temperatures correlated with ocean temperatures down to 150 m depth or deeper, depending on the year, suggesting that MODISderived surface thermal anomalies can be used for monitoring polynya presence and structure during polar night. The finer spatial resolution (100 m) of TIRS wintertime thermal imagery captures more detailed thermal structural variability within these polynyas, which may provide year-round insight into sub-ice-shelf processes if this dataset is collected operationally.Publisher PDFPeer reviewe

Clostridium difficile infection.

Infection of the colon with the Gram-positive bacterium Clostridium difficile is potentially life threatening, especially in elderly people and in patients who have dysbiosis of the gut microbiota following antimicrobial drug exposure. C. difficile is the leading cause of health-care-associated infective diarrhoea. The life cycle of C. difficile is influenced by antimicrobial agents, the host immune system, and the host microbiota and its associated metabolites. The primary mediators of inflammation in C. difficile infection (CDI) are large clostridial toxins, toxin A (TcdA) and toxin B (TcdB), and, in some bacterial strains, the binary toxin CDT. The toxins trigger a complex cascade of host cellular responses to cause diarrhoea, inflammation and tissue necrosis - the major symptoms of CDI. The factors responsible for the epidemic of some C. difficile strains are poorly understood. Recurrent infections are common and can be debilitating. Toxin detection for diagnosis is important for accurate epidemiological study, and for optimal management and prevention strategies. Infections are commonly treated with specific antimicrobial agents, but faecal microbiota transplants have shown promise for recurrent infections. Future biotherapies for C. difficile infections are likely to involve defined combinations of key gut microbiota

Microfold (M) cells: important immunosurveillance posts in the intestinal epithelium

The transcytosis of antigens across the gut epithelium by microfold cells (M cells) is important for the induction of efficient immune responses to some mucosal antigens in Peyer’s patches. Recently, substantial progress has been made in our understanding of the factors that influence the development and function of M cells. This review highlights these important advances, with particular emphasis on: the host genes which control the functional maturation of M cells; how this knowledge has led to the rapid advance in our understanding of M-cell biology in the steady-state and during aging; molecules expressed on M cells which appear to be used as “immunosurveillance” receptors to sample pathogenic microorganisms in the gut; how certain pathogens appear to exploit M cells to infect the host; and finally how this knowledge has been used to specifically target antigens to M cells to attempt to improve the efficacy of mucosal vaccines