Contribution of Lianas to Plant Area Index and Canopy Structure in A Panamanian Forest

Lianas are an important component of tropical forests, where they reduce tree growth, fecundity, and survival. Competition for light from lianas may be intense; however, the amount of light that lianas intercept is poorly understood. We used a large-scale liana-removal experiment to quantify light interception by lianas in a Panamanian secondary forest. We measured the change in plant area index (PAI) and forest structure before and after cutting lianas (for 4 yr) in eight 80 m × 80 m plots and eight control plots (16 plots total). We used ground-based LiDAR to measure the 3-dimensional canopy structure before cutting lianas, and then annually for 2 yr afterwards. Six weeks after cutting lianas, mean plot PAI was 20% higher in control vs. liana removal plots. One yr after cutting lianas, mean plot PAI was ~17% higher in control plots. The differences between treatments diminished significantly 2 yr after liana cutting and, after 4 yr, trees had fully compensated for liana removal. Ground-based LiDAR revealed that lianas attenuated light in the upper- and middle-forest canopy layers, and not only in the upper canopy as was previously suspected. Thus, lianas compete with trees by intercepting light in the upper- and mid-canopy of this forest

Tropical Dry Forest Succession and the Contribution of Lianas to Wood Area Index (WAI)

The transmission and interception of light through the canopy is an important indicator of forest productivity in tropical forest ecosystems, and the amount of light that eventually reaches the forest floor is influenced by its interactions with leaves, branches, fruits, and flowers among many different canopy elements. While most studies of forest canopy light interception focus on leaf area index (LAI), very few studies have examined wood area index (WAI), which may account for a substantial component of light interception in tropical forests. The influence of lianas on the interception of light and their overall contribution to WAI is a potentially important factor, but it is generally overlooked because of its difficulty to assess. In this paper we evaluate the relative contribution that lianas have to the overall WAI and canopy openness as function of successional stage via a latitudinal comparison of sites across the Americas (Mexico, Costa Rica and Brazil). Our results suggest that lianas significantly increase WAI and decreases canopy openness. However, lianas were absent at all of our study sites where canopy openness exceeded 60%. Our data are the first to explicitly document the role of lianas in the estimation of WAI and, overall, they will contribute to better estimations of ecosystem level LAI in tropical environments, where there is a lack of data on WAI

Cellular aspect ratio and cell division mechanics underlie the patterning of cell progeny in diverse mammalian epithelia.

Cell division is essential to expand, shape, and replenish epithelia. In the adult small intestine, cells from a common progenitor intermix with other lineages, whereas cell progeny in many other epithelia form contiguous patches. The mechanisms that generate these distinct patterns of progeny are poorly understood. Using light sheet and confocal imaging of intestinal organoids, we show that lineages intersperse during cytokinesis, when elongated interphase cells insert between apically displaced daughters. Reducing the cellular aspect ratio to minimize the height difference between interphase and mitotic cells disrupts interspersion, producing contiguous patches. Cellular aspect ratio is similarly a key parameter for division-coupled interspersion in the early mouse embryo, suggesting that this physical mechanism for patterning progeny may pertain to many mammalian epithelia. Our results reveal that the process of cytokinesis in elongated mammalian epithelia allows lineages to intermix and that cellular aspect ratio is a critical modulator of the progeny pattern

Diet and Leukocyte Telomere Length in a Population with Extended Longevity: The Costa Rican Longevity and Healthy Aging Study (CRELES)

Elderly Costa Ricans have lower mortality rates compared to their counterparts from developed countries. Reasons for this survival advantage are not completely known. In the present study, we aimed to identify dietary factors associated with leukocyte telomere length (LTL), a marker of biologic aging, in the elderly population of Costa Rica. We conducted prospective analysis in 909 participants aged 60+ years from the Costa Rican Longevity and Healthy Aging Study (CRELES). We used a food frequency questionnaire to assess usual diet. We calculated dietary patterns using Principal Component Analysis (PCA). We used generalized linear models to examine the association of dietary patterns and food groups with leukocyte telomere length. We found two major dietary patterns explaining 9.15% and 7.18% of the total variation of food intake, respectively. The first dietary pattern, which represents a traditional Costa Rican rice and beans pattern, was more frequent in rural parts of the country and was positively associated with baseline LTL: (95% CI) = 42.0 base-pairs (bp) (9.9 bp, 74.1 bp) per one-unit increase of the traditional dietary pattern. In analysis of individual food groups, intake of grains was positively associated with baseline LTL: (95% CI) = 43.6 bp (13.9 bp, 73.3 bp) per one-serving/day increase of consumption of grains. Our results suggest that dietary factors, in particular a traditional food pattern, are associated with telomere length and may contribute to the extended longevity of elderly Costa Ricans.Universidad de Costa Rica/[]/UCR/Costa RicaNational Institutes of Health/[P30 AG012839]/NIH/Estados UnidosNational Institutes of Health/[R01 AG031716]/NIH/Estados UnidosUCR::Vicerrectoría de Investigación::Unidades de Investigación::Ciencias Sociales::Centro Centroamericano de Población (CCP)UCR::Vicerrectoría de Docencia::Ciencias Básicas::Facultad de Ciencias::Escuela de Biologí

Atoh1 \u3csup\u3e+\u3c/sup\u3e secretory progenitors possess renewal capacity independent of Lgr5 \u3csup\u3e+\u3c/sup\u3e cells during colonic regeneration

During homeostasis, the colonic epithelium is replenished every 3–5 days by rapidly cycling Lgr5 + stem cells. However, various insults can lead to depletion of Lgr5 + stem cells, and colonic epithelium can be regenerated from Lgr5-negative cells. While studies in the small intestine have addressed the lineage identity of the Lgr5-negative regenerative cell population, in the colon this question has remained unanswered. Here, we set out to identify which cell(s) contribute to colonic regeneration by performing genetic fate-mapping studies of progenitor populations in mice. First, using keratin-19 (Krt19) to mark a heterogeneous population of cells, we found that Lgr5-negative cells can regenerate colonic crypts and give rise to Lgr5 + stem cells. Notch1 + absorptive progenitor cells did not contribute to epithelial repair after injury, whereas Atoh1 + secretory progenitors did contribute to this process. Additionally, while colonic Atoh1 + cells contributed minimally to other lineages during homeostasis, they displayed plasticity and contributed to epithelial repair during injury, independent of Lgr5 + cells. Our findings suggest that promotion of secretory progenitor plasticity could enable gut healing in colitis

Estimation of the Distribution of Tabebuia guayacan (Bignoniaceae) Using High-Resolution Remote Sensing Imagery

Species identification and characterization in tropical environments is an emerging field in tropical remote sensing. Significant efforts are currently aimed at the detection of tree species, of levels of forest successional stages, and the extent of liana occurrence at the top of canopies. In this paper we describe our use of high resolution imagery from the Quickbird Satellite to estimate the flowering population of Tabebuia guayacan trees at Barro Colorado Island (BCI), in Panama. The imagery was acquired on 29 April 2002 and 21 March 2004. Spectral Angle Mapping via a One-Class Support Vector machine was used to detect the presence of 422 and 557 flowering tress in the April 2002 and March 2004 imagery. Of these, 273 flowering trees are common to both dates. This study presents a new perspective on the effectiveness of high resolution remote sensing for monitoring a phenological response and its use as a tool for potential conservation and management of natural resources in tropical environments

Vitamin E profile in rice (Oryza sativa L.) seeds grown and commercialized in Costa Rica

Introducción. El arroz (Oryza sativa L.) es uno de los cereales más consumidos a nivel mundial, las subespecies índicas y japónicas son las más cultivadas. La vitamina E presente en el arroz posee alta actividad antioxidante que contribuye a extender la longevidad de sus semillas. Su cuantificación permite conocer el aporte nutricional respecto a esta vitamina. Objetivo. Analizar el perfil de vitamina E en semillas de las subespecies de arroz (O. sativa L.) índicas (comerciales registradas, aromáticas, promisorias en desarrollo) y japónicas, consumidas en Costa Rica. Materiales y métodos. Se analizaron veintisiete materiales cultivados en las regiones Chorotega y Brunca, Costa Rica, cosechados en 2020. Se cuantificó la vitamina E por cromatografía líquida de ultra-alta resolución acoplado a detección por masas de cuadrupolo triple con fuente de ionización química a presión atmosférica, en el Centro para Investigaciones en Granos y Semillas (CIGRAS), Universidad de Costa Rica, en 2021. Resultados. En el perfil de vitamina E se obtuvo un agrupamiento característico para las muestras japónicas, opuesto al presentado por las muestras índicas. Los compuestos mayoritarios fueron γ-tocotrienol, α-tocoferol y γ-tocoferol, el rango de concentración total de vitamina E fue de 5,50 a 33,20 μg g-1, donde la subespecie japónica fue la que reportó menor cantidad (6,30 – 8,80 μg g-1), mientras que la muestra Nayuribe, perteneciente a la subespecie índica comercial registrada obtuvo la concentración más alta (33,20 ± 7,40 μg g-1). Conclusión. Aunque las subvariedades analizadas son filogenéticamente de la misma especie, las diferencias significativas encontradas en el aporte nutricional de vitamina E pueden deberse a características intrínsecas de cada subespecie. El contenido significativamente alto de vitamina E de la muestra Nayuribe evidenció que es posible encontrar acervos para alto contenido de vitamina E entre las variedades analizadas.Introduction. Rice (Oryza sativa L.) is one of the most consumed cereals worldwide, the indica and japonica subspecies are the most cultivated. The vitamin E present in rice has a high antioxidant activity that contributes to extend the longevity of its seeds. Its quantification allows to know the nutritional contribution of this vitamin. Objective. To analyze the vitamin E profile in seeds of indica (registered commercial, aromatic, promising in development) and japonica subspecies of rice (O. sativa L.), consumed in Costa Rica. Materials and methods. Twenty-seven materials grown in the Chorotega and Brunca regions of Costa Rica, harvested in 2020 were analyzed. Vitamin E was quantified by ultra-high performance liquid chromatography coupled to triple quadrupole mass detection with chemical ionization source at atmospheric pressure at the Centro para Investigaciones en Granos y Semillas (CIGRAS), Universidad de Costa Rica, in 2021. Results. In the vitamin E profile, a characteristic clustering was obtained for the japonica samples, which was opposite to that presented by the indica samples. The majority compounds were γ-tocotrienol, α-tocopherol, and γ-tocopherol, the range of total vitamin E concentration was 5.50 to 33.20 μg g-1, where the japonica subspecies reported the lowest amount (6.30 – 8.80 μg g-1), while the Nayuribe sample, belonging to the registered commercial indica subspecies, obtained the highest concentration (33.20 ± 7.40 μg g-1). Conclusion. Although the analyzed subvarieties are phylogenetically from the same species, the significant differences found in the nutritional intake of vitamin E may be due to intrinsic characteristics of each subspecies. The significantly high vitamin E content in the Nayuribe sample showed that it is possible to find stocks for a high vitamin E content among the varieties analyzed.Universidad de Costa Rica/[734-C0-213]/UCR/Costa RicaUniversidad de Costa Rica/[734-B2-060]/UCR/Costa RicaUCR::Vicerrectoría de Investigación::Unidades de Investigación::Ciencias Agroalimentarias::Centro para Investigaciones en Granos y Semillas (CIGRAS

The STR polymorphism (AAAAT)n within the intron 1 of the tumor protein 53 (TP53) locus in 17 populations of different ethnic groups of Africa, America, Asia and Europe

artículo arbitrado -- Universidad de Costa Rica, Instituto de investigaciones en Salud. 2004The SIR (A.AAAT). within intron 1 of the TP53 Locus was screened in 17 populations from 3 main ethnic groups: Europeans, Asiatics, and Africans. and from the hybrid population of Costa Rica (1968 samples). Three alleles, 126)7 (bp/copies of the repeat), 13118 and 136/9 were the most prevalent in all populations. Other alleles rarely reached frequencies of 10% or higher. Observed heterozygosities ranged between 0.351 and 0.829. Patterns of diversity fit well with both the geographic origin of the samples and the history of the populations screened. A statistical test suggests that single-step mutational events have been the main mechanism producing new alleles at this locus. Fixation indexes (R57) for this marker showed an effect of population subdivision on divergence only within the Asiatic group; they were insensitive at the level of major ethnic groups as well as within Africans and within EuropeansSe estudio el polimorfismo del microsatelite (AAAAI), del intron 1 del gene TP53 en 17 poblaciones de 3 grupos etnicos: europeos, asiaticos, y africanos subsaharianos, asi coma de la poblacion hibrida de Costa Rica (en total 1968 muestras). Tres aides, 12617 (pares de bases/ copias de la repetición), 131/8 y 136/9 fueron los mas frecuentes en todas las poblaciones, aunque se observaron otros alelos usualmente a frecuencias menores al 10%. Las heterocigosis observadas variaron de 0.351 a 0.829. La distribucion de la universidad parece concordar con el origen geográfico de las muestras y con la historia de las poblaciones estudiadas. Una prueba estadística indica que el evento mutacional que mas alelos nuevos produce en ese marcador es el de un solo paso (expansión o contracción de una cola copia de la repeticion). El indice de fijacion R„ mostro los efectos de la subdivision de poblaciones solo dentro del grupo de los asiaticos y mostro falta de sensibilidad cuando los grupos comparados eran de nivetes superiores de clasificacion (europeos, asiaticos, y africanos) o cuando la comparación se hizo entre los grupos mas antiguos (africanos y europeos).Universidad de costa Rica, Instituto de investigaciones en Salud.UCR::Vicerrectoría de Investigación::Unidades de Investigación::Ciencias de la Salud::Instituto de Investigaciones en Salud (INISA

Payments for ecosystem services in the tropics: a closer look at effectiveness and equity

We undertake a review of academic literature that examines the effectiveness and equity-related performance of PES initiatives targeting biodiversity conservation in tropical and sub-tropical countries. We investigate the key features of such analyses as regards their analytical and methodological approach and we identify emerging lessons from PES practice, leading to a new suggested research agenda. Our results indicate that analyses of PES effectiveness have to date focused on either ecosystem service provision or habitat proxies, with only half of them making explicit assessment of additionality and most describing that payments have been beneficial for land cover and biodiversity. Studies evaluating the impact of PES on livelihoods suggest more negative outcomes, with an uneven treatment of the procedural and distributive considerations of scheme design and payment distribution, and a large heterogeneity of evaluative frameworks. We propose an agenda for future PES research based on the emerging interest in assessing environmental outcomes more rigorously and documenting social impacts in a more comparative and contextually situated form