Genetic differentiation, reproductive mode, and gene flow in the brooding coral Pocillopora damicornis along the Great Barrier Reef, Australia

The widespread and morphologically variable coral Pocillopora damicornis has been reported to exhibit huge variation in life-history traits (e.g. mode of reproduction, growth rate, longevity and dispersal) both locally and regionally throughout the Indo-Pacific Ocean. Dispersal may be achieved by the settlement of sexually or asexually generated brooded planula larvae, by broadcast spawning or more locally through asexual fragmentation of large colonies. In the present study, we conducted a hierarchical survey of allozyme variation within and among reef-crest sites on 3 mid-shelf reefs separated by up to 1200 km on the Great Barrier Reef (GBR), Australia. Our objective was to use allozyme data (1) to quantify local and regional patterns of variation in P. damicornis (along the northeastern coast of Australia), (2) to determine the relative contribution of sexual versus asexual production of planulae in P. damicornis, and (3) to estimate levels of gene flow among adjacent sites (>5 km apart) and among reefs separated by 500 to 1200 km. High levels of genotypic diversity in our samples of P. damicornis imply that dispersive propagules in this species are produced sexually rather than asexually along the length of the GBR. Corals at all sites displayed the same level of multi-locus genotypic diversity expected for randomly mating, sexually derived populations, and the majority of individual colonies possessed unique 7-locus genotypes. We also detected consistent deficits of heterozygotes within each collection (from 3 local sites on each of the 3 widely spaced reefs). This pattern is consistent with the predicted effects of sexual reproduction associated with some localised dispersal of gametes or larvae (although other explanations cannot be excluded). Furthermore, each reef was genetically subdivided, suggesting that larval recruitment was localised and that these populations are slightly inbred: hierarchical analysis of the standardised genetic variances (FST)(estimated as Weir & Cockerham's Θ) revealed that, although there was only moderate variation among all 9 sites (FST = 0.055 ± 0.029), more variation was found among sites within reefs (FSL= 0.035 ± 0.04 to 0.088 ± 0.033) than among distant reefs (FLT= 0.008 ± 0.014). This homogeneity of gene frequencies across widely separated reefs implies that reefs are connected by high levels of gene flow (Nem = ca 31) and that local populations of P. damicornis separated by >1000 km can interbreed sufficiently to maintain a consistent suite of life-history characters

Measurement of the Atmospheric Muon Spectrum from 20 to 3000 GeV

The absolute muon flux between 20 GeV and 3000 GeV is measured with the L3 magnetic muon spectrometer for zenith angles ranging from 0 degree to 58 degree. Due to the large exposure of about 150 m2 sr d, and the excellent momentum resolution of the L3 muon chambers, a precision of 2.3 % at 150 GeV in the vertical direction is achieved. The ratio of positive to negative muons is studied between 20 GeV and 500 GeV, and the average vertical muon charge ratio is found to be 1.285 +- 0.003 (stat.) +- 0.019 (syst.).Comment: Total 32 pages, 9Figure

Genetic evidence of widespread dispersal in a parthenogenetic freshwater ostracod

We used an hierarchical analysis of allozyme variation to investigate for the freshwater ostracod Candonocypris novaezelandiae the relative contributions of sexual and asexual reproduction to recruitment into 42 local populations and to infer patterns of gene flow within and among four geographical regions (watersheds) in south-eastern Australia. Allele frequency variation among local populations was marked (mean F(ST) = 0.228) but showed no regional differentiation. The allele frequency differences among local populations probably reflect the effects of stochastic processes, such as founder events, as well as variation in the success, and hence abundance, of particular clonal genotypes within water-bodies. Indeed, local populations were highly clonal, containing only females and displaying relatively low levels of genotypic diversity. Nevertheless, the distribution of genotypes within and among regions was surprising. The bulk of sampled individuals (88 per cent) were represented by just six common genotypes that were shared extensively among local populations and were geographically widespread. Individual samples contained a mean of 4.05, and up to 10, distinct four-locus genotypes and overall we detected a total of 26 electrophoretically distinct genotypes. In combination, our results suggest that either the south-eastern Australian populations of C. novaezelandiae arose through a recent colonization event (perhaps associated with an expansion of agricultural practices) or there is sufficient continuing gene flow between regions to prevent differentiation. However, the exact contributions of sexual and asexual reproduction to dispersal in this ostracod remain unclear

Is the post-disturbance composition of a plant population determined by selection for outcrossed seedlings or by the composition of the seedbank?

Seedbanks are expected to buffer populations against disturbances, such as fire, that could alter the genetic composition of smaller, ephemeral adult populations. However, seedling genotypes may be influenced by the spatially heterogeneous nature of both the seedbank and the disturbance (for example, germination may vary with local disturbance) and also by selection acting on germination and post-germination performance. We used microsatellite-DNA surveys of seedlings emerging from the soil-stored seedbanks of Grevillea macleayana after wildfire to compare diversity and spatial structure in seedlings and adults, and through resampling of the seedling data set, to determine whether the resultant adult population reflected the effects of selection or random seedling mortality. The large post-fire seedling cohorts captured the full allelic diversity of the pre-fire adult population. However, we found a mismatch in the genotypic structure of adults and seedlings. Seedlings displayed larger heterozygous deficits than adults; however, over the ensuing 11 years, seedling heterozygosity eventually matched values for the pre-fire adults. Increasing heterozygosity among adults has generally been attributed to heterosis and/or reduction in Wahlund effects via self-thinning. Resampling of early post-fire seedlings to generate samples of equivalent size to survivors at 11 years showed that increases in heterozygosity must be driven by selection favouring outcrossed seed. This finding is important in an evolutionary context but also has implications for the restoration of natural or managed populations where a seedbank is a viable source of recruits