Selecting for food-feed traits in desi and kabuli genotypes of chickpea (Cicer arietinum)

The study explored the genetic and environmental variability in chickpea for food-feed traits. Seventy nine genotypes of 17 early-maturing desi genotypes, 19 early-maturing kabuli genotypes and 43 late-maturing kabuli genotypes were evaluated for food-feed traits in 7 trials laid out in a randomized complete block design in 3 locations in Ethiopia. All trials showed wide genotypic ranges in various traits related to grain yield, straw yield and straw quality. Analysis of variance for individual trials showed significant (P<0.05) effects of genotype, location and their interaction on grain and straw yields, CP, IVOMD and NDF in all populations. Correlation analysis exhibited either positive or insignificant correlations with straw yield in all trials. The correlation between IVOMD and grain yield was insignificant in all trials. Grain yield correlated significantly (P<0.001) and positively to NDF in early maturing kabuli, however, the correlation was moderate (r= 0.396). Grain yield correlated either weakly or insignificantly to CP and Ca in the trials. The correlation between P and grain yield was ignored as the straw content of P was very small in all genotypes (<1.78 g/kg). Weak or absence of correlations between grain yields with straw traits would enable chickpea breeders to manipulate grain yield and straw traits independently. This presents an opportunity to identify parental genotypes for improving grain yield and straw traits for individual locations

Programmatic correlates of maternal healthcare seeking behaviors in Ethiopia

Background: Considerable improvement in maternal healthcare use has been observed since the inception of the health extension program (HEP) in Ethiopia in 2003.Objective: This paper evaluates the influence of HEP outreach strategies on maternal healthcare use.Method: Cross-sectional survey of 2,916 women with children 0 to 11 months from Amhara, Oromiya, Southern Nations, Nationalities and People’s, and Tigray regions, obtained between December 2008 and January 2009, were analyzed using regression models to assess the impacts of HEP strategies on maternal health outcomes.Result: The analyses found that communities (i.e., kebeles) with relatively high prevalence of model families, higher rate of household visits by health extension workers, and higher rate of household visits by voluntary community health workers were associated with improved antenatal care use, tetanus toxoid vaccination coverage, and receiving postnatal care visits; but the strategies were not associated with deliveries attended by health professionals.Conclusion: Although the impacts of HEP strategies on maternal healthcare use were statistically significant, they were not optimum to reach the maternal mortality reduction targets of the government of Ethiopia. The HEP needs to review and strengthen its community based strategies in order to reach its goals. [Ethiop. J. Health Dev. 2010;24 Special Issue 1:92-99

Evapotranspiration in the Nile Basin: Identifying Dynamics, Trends, and Drivers 2002-2011

Analysis of the relationship between evapotranspiration (ET) and its natural and anthropogenic drivers is critical in water-limited basins such as the Nile. The spatiotemporal relationships of ET with rainfall and vegetation dynamics in the Nile Basin during 2002–2011 were analyzed using satellite-derived data. Non-parametric statistics were used to quantify ET-rainfall interactions and trends across land cover types and subbasins. We found that 65% of the study area (2.5 million km2) showed significant (p \u3c 0.05) positive correlations between monthly ET and rainfall, whereas 7% showed significant negative correlations. As expected, positive ET-rainfall correlations were observed over natural vegetation, mixed croplands/natural vegetation, and croplands, with a few subbasin-specific exceptions. In particular, irrigated croplands, wetlands and some forests exhibited negative correlations. Trend tests revealed spatial clusters of statistically significant trends in ET (6% of study area was negative; 12% positive), vegetation greenness (24% negative; 12% positive) and rainfall (11% negative; 1% positive) during 2002–2011. The Nile Delta, Ethiopian highlands and central Uganda regions showed decline in ET while central parts of Sudan, South Sudan, southwestern Ethiopia and northeastern Uganda showed increases. Except for a decline in ET in central Uganda, the detected changes in ET (both positive and negative) were not associated with corresponding changes in rainfall. Detected declines in ET in the Nile delta and Ethiopian highlands were found to be attributable to anthropogenic land degradation, while the ET decline in central Uganda is likely caused by rainfall reduction

Genome-wide association mapping for grain shape and color traits in Ethiopian durum wheat (Triticum turgidum ssp. durum)

Grain shape and color strongly influence yield and quality of durum wheat. Identifying QTL for these traits is essential for transferring favorable alleles based on selection strategies and breeding objectives. In the present study, 192 Ethiopian durum wheat accessions comprising 167 landraces and 25 cultivars were genotyped with a high-density Illumina iSelect 90K single-nucleotide polymorphism (SNP) wheat array to conduct a genome-wide association analysis for grain width (GW), grain length (GL), CIE (Commission Internationale l'Eclairage) L* (brightness), CIE a* (redness), and CIE b* (yellowness) traits. The accessions were planted at Sinana Agricultural Research Center, Ethiopia in the 2015/2016 cropping season in a complete randomized block design with three replications. Twenty homogeneous and healthy seeds per replicate were used for trait measurement. Digital image analysis of seeds with GrainScan software package was used to generate the phenotypic data. Analysis of variance revealed highly significant differences between accessions for all traits. A total of 46 quantitative trait loci (QTL) were identified for all traits across all chromosomes. One novel major candidate QTL (−lg P ≥ 4) with pleiotropic effects for grain CIE L* (brightness) and CIE a* (redness) was identified on the long arm of chromosome 2A. Eighteen nominal QTL (−lg P ≥ 3) and 26 suggestive QTL (−lg P ≥ 2.5) were identified. Pleiotropic QTL influencing both grain shape and color were identified

Evaluation and application of multi-source satellite rainfall product CHIRPS to assess spatio-temporal rainfall variability on data-sparse Western margins of Ethiopian Highlands

The spatio-temporal characteristic of rainfall in the Beles Basin of Ethiopia is poorly understood, mainly due to lack of data. With recent advances in remote sensing, satellite derived rainfall products have become alternative sources of rainfall data for such poorly gauged areas. The objectives of this study were: (i) to evaluate a multi-source rainfall product (Climate Hazards Group Infrared Precipitation with Stations: CHIRPS) for the Beles Basin using gauge measurements and (ii) to assess the spatial and temporal variability of rainfall across the basin using validated CHIRPS data for the period 1981-2017. Categorical and continuous validation statistics were used to evaluate the performance, and time-space variability of rainfall was analyzed using GIS operations and statistical methods. Results showed a slight overestimation of rainfall occurrence by CHIRPS for the lowland region and underestimation for the highland region. CHIRPS underestimated the proportion of light daily rainfall events and overestimated the proportion of high intensity daily rainfall events. CHIRPS rainfall amount estimates were better in highland regions than in lowland regions, and became more accurate as the duration of the integration time increases from days to months. The annual spatio-temporal analysis result using CHIRPS revealed: a mean annual rainfall of the basin is 1490 mm (1050-2090 mm), a 50 mm increase of mean annual rainfall per 100 m elevation rise, periodical and persistent drought occurrence every 8 to 10 years, a significant increasing trend of rainfall (similar to 5 mm year(-1)), high rainfall variability observed at the lowland and drier parts of the basin and high coefficient of variation of monthly rainfall in March and April (revealing occurrence of bimodal rainfall characteristics). This study shows that the performance of CHIRPS product can vary spatially within a small basin level, and CHIRPS can help for better decision making in poorly gauged areas by giving an option to understand the space-time variability of rainfall characteristics

Genome-wide association analysis unveils novel QTLs for seminal root system architecture traits in Ethiopian durum wheat

Background: Genetic improvement of root system architecture is essential to improve water and nutrient use efficiency of crops or to boost their productivity under stress or non-optimal soil conditions. One hundred ninety-two Ethiopian durum wheat accessions comprising 167 historical landraces and 25 modern cultivars were assembled for GWAS analysis to identify QTLs for root system architecture (RSA) traits and genotyped with a high-density 90 K wheat SNP array by Illumina. Results: Using a non-roll, paper-based root phenotyping platform, a total of 2880 seedlings and 14,947 seminal roots were measured at the three-leaf stage to collect data for total root length (TRL), total root number (TRN), root growth angle (RGA), average root length (ARL), bulk root dry weight (RDW), individual root dry weight (IRW), bulk shoot dry weight (SDW), presence of six seminal roots per seedling (RT6) and root shoot ratio (RSR). Analysis of variance revealed highly significant differences between accessions for all RSA traits. Four major (− log10P ≥ 4) and 34 nominal (− log10P ≥ 3) QTLs were identified and grouped in 16 RSA QTL clusters across chromosomes. A higher number of significant RSA QTL were identified on chromosome 4B particularly for root vigor traits (root length, number and/or weight). Conclusions: After projecting the identified QTLs on to a high-density tetraploid consensus map along with previously reported RSA QTL in both durum and bread wheat, fourteen nominal QTLs were found to be novel and could potentially be used to tailor RSA in elite lines. The major RGA QTLs on chromosome 6AL detected in the current study and reported in previous studies is a good candidate for cloning the causative underlining sequence and identifying the beneficial haplotypes able to positively affect yield under water- or nutrient-limited conditions

Sub-sampling a large physical soil archive for additional analyses to support spatial mapping; a pre-registered experiment in the Southern Nations, Nationalities, and Peoples Region (SNNPR) of Ethiopia

The value of physical archives of soil material from field sampling activities has been widely recognized. If we want to use archive material for new destructive analyses to support a task, such as spatial mapping, then an efficient sub-sampling strategy is needed, both to manage analytical costs and to conserve the archive material. In this paper we present an approach to this problem when the objective is spatial mapping by ordinary kriging. Our objective was to subsample the physical archive from the Ethiopia Soil Information System (EthioSIS) survey of the Southern Nations, Nationalities and Peoples Region (SNNPR) for spatial mapping of two variables, concentrations of particular fractions of selenium and iodine in the soil, which had not been measured there. We used data from cognate parts of surrounding regions of Ethiopia to estimate variograms of these properties, and then computed prediction error variances for maps in SNNPR based on proposed subsets of the archive of different size, selected to optimize a spatial coverage criterion (with some close sample pairs included). On this basis a subsample was selected. This is a preregistered experiment in that we have proposed criteria for evaluating the success of our approach, and are publishing that in advance of receiving analytical data on the subsampled material from the laboratories where they are being processed. A subsequent short report will publish the outcome. The use of preregistered trials is widely recommended and used in areas of science including public health, and we believe that it is a sound strategy to promote reproducible research in soil science

Systematic review and meta-analysis: prevalence of alcohol use among young people in eastern Africa.

OBJECTIVE: Systematic review and meta-analysis of published studies of alcohol use among young people (age 15-24 years) in eastern Africa to estimate prevalence of alcohol use and determine the extent of use of standardised screening questionnaires in alcohol studies. METHODS: Five databases (MEDLINE, EMBASE, Global Health, Africa-wide, and PsycINFO) were searched for publications until 30th June 2013. Results were summarised using the guidelines on preferred reporting items for systematic reviews and meta-analyses (PRISMA) and on quality assessment using the modified quality assessment tool for systematic reviews of observational studies (QATSO). Heterogeneity was assessed using the I(2) statistic (DerSimonian-Laird). RESULTS: We identified 2785 potentially relevant studies, of which 56 were eligible for inclusion. Only two studies (4%) used the standardised Alcohol Use Disorder Identification Test (AUDIT) questionnaire, and six studies (13%) used the Cut down, Annoyed, Guilt, Eye opener (CAGE) questionnaire. The reported median prevalence of alcohol use was ever-use 52% [interquartile range (IQR): 20-58%], use in the last month 28% (IQR: 17-37%), use in the last year 26% (IQR: 22-32%), and problem drinking as defined by CAGE or AUDIT 15% (IQR: 3-36%). We observed high heterogeneity between studies, with the highest prevalence of ever use of alcohol among university students (82%; 95%CI: 79-85%) and female sex workers (66%; 95%CI: 58-74%). Current use was most prevalent among male sex workers (69%; 95%CI: 63-75%). CONCLUSIONS: Reported alcohol use and problem drinking were common among diverse groups of young people in eastern Africa, indicating the urgent need for alcohol-focused interventions in this population. Few studies have used standardised alcohol screening questionnaires. Epidemiological research to investigate alcohol-focused interventions in young people should aim to apply such questionnaires that should be validated for use in this population

Optimizing near infrared reflectance spectroscopy to predict nutritional quality of chickpea straw for livestock feeding

Multidimensional improvement programs of chickpea require screening of a large number of genotypes for straw nutritive value. The ability of near infrared reflectance spectroscopy (NIRS) to determine the nutritive value of chickpea straw was identified in the current study. A total of 480 samples of chickpea straw representing a nation-wide range of environments and genotypic diversity (40 genotypes) were scanned at a spectral range of 1108 to 2492 nm. The samples were reduced to 190 representative samples based on the spectral data then divided into a calibration set (160 samples) and a cross-validation set (30 samples). All 190 samples were analysed for dry matter, ash, crude protein, neutral detergent fibre, acid detergent fibre, acid detergent lignin, Zn, Mn, Ca, Mg, Fe, P, and in vitro gas production metabolizable energy using conventional methods. Multiple regression analysis was used to build the prediction equations. The prediction equation generated by the study accurately predicted the nutritive value of chickpea straw (R2 of cross validation > 0.68; standard error of prediction < 1%). Breeding programs targeting improving food-feed traits of chickpea could use NIRS as a fast, cheap, and reliable tool to screen genotypes for straw nutritional quality