Quantitative analysis of ribosome–mRNA complexes at different translation stages

Inhibition of primer extension by ribosome–mRNA complexes (toeprinting) is a proven and powerful technique for studying mechanisms of mRNA translation. Here we have assayed an advanced toeprinting approach that employs fluorescently labeled DNA primers, followed by capillary electrophoresis utilizing standard instruments for sequencing and fragment analysis. We demonstrate that this improved technique is not merely fast and cost-effective, but also brings the primer extension inhibition method up to the next level. The electrophoretic pattern of the primer extension reaction can be characterized with a precision unattainable by the common toeprint analysis utilizing radioactive isotopes. This method allows us to detect and quantify stable ribosomal complexes at all stages of translation, including initiation, elongation and termination, generated during the complete translation process in both the in vitro reconstituted translation system and the cell lysate. We also point out the unique advantages of this new methodology, including the ability to assay sites of the ribosomal complex assembly on several mRNA species in the same reaction mixture

Integrative taxonomy reveals too extensive lumping and a new species in the moss genus <i>Amphidium</i> (Bryophyta)

<p>An integrative taxonomic approach, including molecular phylogenetic reconstructions based on plastid <i>rps4-trnF</i> and nuclear ITS sequences, statistical analysis of morphological-anatomical characters, and classical taxonomy, indicates that the reduction of 13 <i>Amphidium</i> species to three in a recent morphological revision represents a case of too extensive lumping. Instead, six <i>Amphidium</i> species can be distinguished based on molecular and morphological data, the widespread <i>Amphidium lapponicum</i>, <i>A. mougeotii</i>, and <i>A. tortuosum</i>, as well as the Macaronesian endemic <i>A. curvipes</i>, the North American endemic <i>A. californicum</i>, and a newly discovered species from Central Asia (southern Siberia and northern Mongolia), <i>A. asiaticum</i> sp. nov. Diagnostic morphological characters for all six species are discussed. The present data confirm that species diversity of <i>Amphidium</i> is highest in the Holarctic, where all six species occur.</p

A miniature world in decline: European Red List of Mosses, Liverworts and Hornworts

This publication has been prepared by IUCN (International Union for Conservation of Nature) as a deliverable of the LIFE European Red Lists project (LIFE14 PRE BE 001). A miniature world in decline: The European Red List of Mosses, Liverworts and Hornworts is, therefore, a part of a series of publications released since 2015, when the project began, that also include: • European Red List of Lycopods and Ferns, 2017 • European Red List of Saproxylic Beetles, 2018 • European Red list of Terrestrial Molluscs: slugs, snails, and semi-slugs, 2019 • European Red list of Trees, 2019 • European Red list of Selected Endemic Shrubs, 2019 Based on other European Red List assessments, 59% of freshwater molluscs, 40% of freshwater fishes, 28% of grasshoppers, crickets and bush-crickets, 23% of amphibians, 20% of reptiles, 20% of ferns and lycopods, 17% of mammals, 16% of dragonflies, 13% of birds, 9% of butterflies and bees, 8% of aquatic plants and 2% of medicinal plants are threatened at the European level (Allen et al., 2014; IUCN, 2015; Hochkirch et al., 2016; García Criado et al., 2017). Additional European Red Lists assessing a selection of species showed that 22% of terrestrial molluscs, 16% of crop wild relatives and 18% of saproxylic beetles are also threatened (Cuttelod et al., 2011; Bilz et al., 2011; Cálix et al., 2018). The findings of this work suggest that 23% of bryophytes are threatened species in Europe, representing the fifth most threatened group of plants assessed so far

New national and regional bryophyte records, 58

International audienc

A miniature world in decline: European Red List of Mosses, Liverworts and Hornworts

This publication has been prepared by IUCN (International Union for Conservation of Nature) as a deliverable of the LIFE European Red Lists project (LIFE14 PRE BE 001). A miniature world in decline: The European Red List of Mosses, Liverworts and Hornworts is, therefore, a part of a series of publications released since 2015, when the project began, that also include: • European Red List of Lycopods and Ferns, 2017 • European Red List of Saproxylic Beetles, 2018 • European Red list of Terrestrial Molluscs: slugs, snails, and semi-slugs, 2019 • European Red list of Trees, 2019 • European Red list of Selected Endemic Shrubs, 2019 Based on other European Red List assessments, 59% of freshwater molluscs, 40% of freshwater fishes, 28% of grasshoppers, crickets and bush-crickets, 23% of amphibians, 20% of reptiles, 20% of ferns and lycopods, 17% of mammals, 16% of dragonflies, 13% of birds, 9% of butterflies and bees, 8% of aquatic plants and 2% of medicinal plants are threatened at the European level (Allen et al., 2014; IUCN, 2015; Hochkirch et al., 2016; García Criado et al., 2017). Additional European Red Lists assessing a selection of species showed that 22% of terrestrial molluscs, 16% of crop wild relatives and 18% of saproxylic beetles are also threatened (Cuttelod et al., 2011; Bilz et al., 2011; Cálix et al., 2018). The findings of this work suggest that 23% of bryophytes are threatened species in Europe, representing the fifth most threatened group of plants assessed so far