265 research outputs found

    On the lifting of the Nagata automorphism

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    It is proved that the Nagata automorphism (Nagata coordinates, respectively) of the polynomial algebra F[x,y,z]F[x,y,z] over a field FF cannot be lifted to a zz-automorphism (zz-coordinate, respectively) of the free associative algebra KK. The proof is based on the following two new results which have their own interests: degree estimate of QFF{Q*_FF} and tameness of the automorphism group AutQ(QFF){\text{Aut}_Q(Q*_FF)}.Comment: 15 page

    An interactive web-based educational tool improves detection and delineation of Barrett’s esophagus related neoplasia

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    Background & Aims: Endoscopic detection of early Barrett’s esophagus-related neoplasia (BORN) is a challenge. We aimed to develop a web-based teaching tool for improving detection and delineation of BORN. Methods: We made high-definition digital videos during endoscopies of patients with BORN and non-dysplastic Barrett’s esophagus (NDBE). Three experts superimposed their delineations of BORN lesions on the videos using special tools. In phase 1, 68 general endoscopists from 4 countries assessed 4 batches of 20 videos. After each batch, mandatory feedback compared assessors interpretations with those from experts . These data informed selection of 25 videos for the phase 2 module, which was completed by 121 new assessors from 5 countries. A 5-video test batch was completed before and after scoring of the four 5-video training batches. Mandatory feedback was as in phase 1. Outcome measures were scores for detection, delineation, agreement delineation, and relative delineation of BORN. Results: A linear mixed-effect model showed significant sequential improvement for all 4 outcomes over successive training batches in both phases. In phase 2, median detection rates of BORN in the test batch increased by 30% (P [less than].001) after training. From baseline to the end of the study, there were relative increases in scores of 46% for detection, 129% for delineation, 105% for agreement delineation, and 106% for relative delineation (all P [less than].001). Scores improved independent of assessors’ country of origin or level of endoscopic experience

    Cold-water coral growth under extreme environmental conditions, the Cape Lookout area, NW Atlantic

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    The Cape Lookout cold-water coral area off thecoast of North Carolina forms the shallowest and northernmostcold-water coral mound area on the Blake Plateau inthe NW Atlantic. Cold-water coral habitats near Cape Lookoutare occasionally bathed in the Gulf Stream, which is characterisedby oligotrophic warm water and strong surface currents.Here, we present the first insights into the mound distributionand morphology, sedimentary environment and coralcover and near-bed environmental conditions as recordedby bottom landers from this coral area. The mounds occurbetween 320 and 550m water depth and are characterisedby high acoustic backscatter indicating the presenceof hard structure. Three distinct mound morphologies wereobserved: (1) a mound with a flattened top at 320 m, (2)multi-summited mounds with a teardrop shape in the middlepart of the area and (3) a single mound at 540m water depth.Echosounder profiles show the presence of a strong reflectorunderneath all mound structures that forms the base of themounds. This reflector cropped out at the downstream side ofthe single mound and consists of carbonate slabs. Video analysisrevealed that all mounds are covered by Lophelia pertusaand that living colonies only occur close to the summitsof the SSW side of the mounds, which is the side that facesthe strongest currents. Off-mound areas were characterisedby low backscatter and sediment ripples, indicating the presenceof relatively strong bottom currents. Two bottom landerswere deployed amidst the coral mounds between December2009 and May 2010. Both landers recorded prominentevents, characterised by large fluctuations in environmentalconditions near the seabed as well as in the overlyingwater column. The period between December and April wascharacterised by several events of increasing temperature andsalinity, coinciding with increased flow and near-bed acousticbackscatter. During these events temperature fluctuatedby up to 9 ?C within a day, which is the largest temperaturevariability as measured so far in a cold-water coral habitat.Warm events, related to Gulf Stream meanders, had the durationof roughly 1 week and the current during these eventswas directed to the NNE. The consequences of such eventsmust be significant given the strong effects of temperature on the metabolism of cold-water corals. Furthermore, elevatedacoustic backscatter values and high mass fluxes werealso recorded during these events, indicating a second stressorthat may affect the corals. The abrasive nature of sand incombination with strong currents might sand blast the corals.We conclude that cold-water corals near Cape Lookout liveunder extreme conditions that limit mound growth at present

    Computational Modeling of Single-Cell Migration::The Leading Role of Extracellular Matrix Fibers

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    Cell migration is vitally important in a wide variety of biological contexts ranging from embryonic development and wound healing to malignant diseases such as cancer. It is a very complex process that is controlled by intracellular signaling pathways as well as the cell's microenvironment. Due to its importance and complexity, it has been studied for many years in the biomedical sciences, and in the last 30 years it also received an increasing amount of interest from theoretical scientists and mathematical modelers. Here we propose a force-based, individual-based modeling framework that links single-cell migration with matrix fibers and cell-matrix interactions through contact guidance and matrix remodelling. With this approach, we can highlight the effect of the cell's environment on its migration. We investigate the influence of matrix stiffness, matrix architecture, and cell speed on migration using quantitative measures that allow us to compare the results to experiments

    Identification of DNA sequence variation in Campylobacter jejuni strains associated with the Guillain-Barre syndrome by high-throughput AFLP analysis.

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    BACKGROUND: Campylobacter jejuni is the predominant cause of antecedent infection in post-infectious neuropathies such as the Guillain-Barre (GBS) and Miller Fisher syndromes (MFS). GBS and MFS are probably induced by molecular mimicry between human gangliosides and bacterial lipo-oligosaccharides (LOS). This study describes a new C. jejuni-specific high-throughput AFLP (htAFLP) approach for detection and identification of DNA polymorphism, in general, and of putative GBS/MFS-markers, in particular. RESULTS: We compared 6 different isolates of the "genome strain" NCTC 11168 obtained from different laboratories. HtAFLP analysis generated approximately 3000 markers per stain, 19 of which were polymorphic. The DNA polymorphisms could not be confirmed by PCR-RFLP analysis, suggesting a baseline level of 0.6% AFLP artefacts. Comparison of NCTC 11168 with 4 GBS-associated strains revealed 23 potentially GBS-specific markers, 17 of which were identified by DNA sequencing. A collection of 27 GBS/MFS-associated and 17 enteritis control strains was analyzed with PCR-RFLP tests based on 11 of these markers. We identified 3 markers, located in the LOS biosynthesis genes cj1136, cj1138 and cj1139c

    Critical Behavior of the Supersolid transition in Bose-Hubbard Models

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    We study the phase transitions of interacting bosons at zero temperature between superfluid (SF) and supersolid (SS) states. The latter are characterized by simultaneous off-diagonal long-range order and broken translational symmetry. The critical phenomena is described by a long-wavelength effective action, derived on symmetry grounds and verified by explicit calculation. We consider two types of supersolid ordering: checkerboard (X) and collinear (C), which are the simplest cases arising in two dimensions on a square lattice. We find that the SF--CSS transition is in the three-dimensional XY universality class. The SF--XSS transition exhibits non-trivial new critical behavior, and appears, within a d=3ϵd=3-\epsilon expansion to be driven generically first order by fluctuations. However, within a one--loop calculation directly in d=2d=2 a strong coupling fixed point with striking ``non-Bose liquid'' behavior is found. At special isolated multi-critical points of particle-hole symmetry, the system falls into the 3d Ising universality class.Comment: RevTeX, 24 pages, 16 figures. Also available at http://www.cip.physik.tu-muenchen.de/tumphy/d/T34/Mitarbeiter/frey.htm

    Variable-range hopping in quasi-one-dimensional electron crystals

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    We study the effect of impurities on the ground state and the low-temperature dc transport in a 1D chain and quasi-1D systems of many parallel chains. We assume that strong interactions impose a short-range periodicicity of the electron positions. The long-range order of such an electron crystal (or equivalently, a 4kF4 k_F charge-density wave) is destroyed by impurities. The 3D array of chains behaves differently at large and at small impurity concentrations NN. At large NN, impurities divide the chains into metallic rods. The low-temperature conductivity is due to the variable-range hopping of electrons between the rods. It obeys the Efros-Shklovskii (ES) law and increases exponentially as NN decreases. When NN is small, the metallic-rod picture of the ground state survives only in the form of rare clusters of atypically short rods. They are the source of low-energy charge excitations. In the bulk the charge excitations are gapped and the electron crystal is pinned collectively. A strongly anisotropic screening of the Coulomb potential produces an unconventional linear in energy Coulomb gap and a new law of the variable-range hopping lnσ(T1/T)2/5-\ln\sigma \sim (T_1 / T)^{2/5}. T1T_1 remains constant over a finite range of impurity concentrations. At smaller NN the 2/5-law is replaced by the Mott law, where the conductivity gets suppressed as NN goes down. Thus, the overall dependence of σ\sigma on NN is nonmonotonic. In 1D, the granular-rod picture and the ES apply at all NN. The conductivity decreases exponentially with NN. Our theory provides a qualitative explanation for the transport in organic charge-density wave compounds.Comment: 20 pages, 7 figures. (v1) The abstract is abridged to 24 lines. For the full abstract, see the manuscript (v2) several changes in presentation per referee's comments. No change in result

    Central-line-associated bloodstream infection burden among Dutch neonatal intensive care units

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    Background: The establishment of an epidemiological overview provides valuable insights needed for the (future) dissemination of infection-prevention initiatives. Aim: To describe the nationwide epidemiology of central-line-associated bloodstream infections (CLABSI) among Dutch Neonatal Intensive Care Units (NICUs). Methods: Data from 2935 neonates born at &lt;32 weeks' gestation and/or with a birth weight &lt;1500 g admitted to all nine Dutch NICUs over a two-year surveillance period (2019–2020) were analysed. Variations in baseline characteristics, CLABSI incidence per 1000 central-line days, pathogen distribution and CLABSI care bundles were evaluated. Multi-variable logistic mixed-modelling was used to identify significant predictors for CLABSI. Results:A total of 1699 (58%) neonates received a central line, in which 160 CLABSI episodes were recorded. Coagulase-negative staphylococci were the most common infecting organisms of all CLABSI episodes (N=100, 63%). An almost six-fold difference in the CLABSI incidence between participating units was found (2.91–16.14 per 1000 line-days). Logistic mixed-modelling revealed longer central line dwell-time (adjusted odds ratio (aOR):1.08, P&lt;0.001), umbilical lines (aOR:1.85, P=0.03) and single rooms (aOR:3.63, P=0.02) to be significant predictors of CLABSI. Variations in bundle elements included intravenous tubing care and antibiotic prophylaxis. Conclusions: CLABSI remains a common problem in preterm infants in The Netherlands, with substantial variation in incidence between centres. Being the largest collection of data on the burden of neonatal CLABSI in The Netherlands, this epidemiological overview provides a solid foundation for the development of a collaborative platform for continuous surveillance, ideally leading to refinement of national evidence-based guidelines. Future efforts should focus on ensuring availability and extraction of routine patient data in aggregated formats.</p

    Central-line-associated bloodstream infection burden among Dutch neonatal intensive care units

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    Background: The establishment of an epidemiological overview provides valuable insights needed for the (future) dissemination of infection-prevention initiatives. Aim: To describe the nationwide epidemiology of central-line-associated bloodstream infections (CLABSI) among Dutch Neonatal Intensive Care Units (NICUs). Methods: Data from 2935 neonates born at &lt;32 weeks' gestation and/or with a birth weight &lt;1500 g admitted to all nine Dutch NICUs over a two-year surveillance period (2019–2020) were analysed. Variations in baseline characteristics, CLABSI incidence per 1000 central-line days, pathogen distribution and CLABSI care bundles were evaluated. Multi-variable logistic mixed-modelling was used to identify significant predictors for CLABSI. Results:A total of 1699 (58%) neonates received a central line, in which 160 CLABSI episodes were recorded. Coagulase-negative staphylococci were the most common infecting organisms of all CLABSI episodes (N=100, 63%). An almost six-fold difference in the CLABSI incidence between participating units was found (2.91–16.14 per 1000 line-days). Logistic mixed-modelling revealed longer central line dwell-time (adjusted odds ratio (aOR):1.08, P&lt;0.001), umbilical lines (aOR:1.85, P=0.03) and single rooms (aOR:3.63, P=0.02) to be significant predictors of CLABSI. Variations in bundle elements included intravenous tubing care and antibiotic prophylaxis. Conclusions: CLABSI remains a common problem in preterm infants in The Netherlands, with substantial variation in incidence between centres. Being the largest collection of data on the burden of neonatal CLABSI in The Netherlands, this epidemiological overview provides a solid foundation for the development of a collaborative platform for continuous surveillance, ideally leading to refinement of national evidence-based guidelines. Future efforts should focus on ensuring availability and extraction of routine patient data in aggregated formats.</p
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