Shipborne measurements of XCO2, XCH4, and XCO above the Pacific Ocean and comparison to CAMS atmospheric analyses and S5P/TROPOMI

Measurements of atmospheric column-averaged dry-air mole fractions of carbon dioxide (XCO2), methane (XCH4), and carbon monoxide (XCO) have been collected across the Pacific Ocean during the Measuring Ocean REferences 2 (MORE-2) campaign in June 2019.We deployed a shipborne variant of the EM27/SUN Fourier transform spectrometer (FTS) on board the German R/V Sonne which, during MORE-2, crossed the Pacific Ocean from Vancouver, Canada, to Singapore. Equipped with a specially manufactured fast solar tracker, the FTS operated in direct-sun viewing geometry during the ship cruise reliably delivering solar absorption spectra in the shortwave infrared spectral range (4000 to 11000 cm-1). After filtering and bias correcting the dataset, we report on XCO2, XCH4, and XCO measurements for 22 d along a trajectory that largely aligns with 30° N of latitude between 140°W and 120° E of longitude. The dataset has been scaled to the Total Carbon Column Observing Network (TCCON) station in Karlsruhe, Germany, before and after the MORE-2 campaign through side-by-side measurements. The 1σ repeatability of hourly means of XCO2, XCH4, and XCO is found to be 0.24 ppm, 1.1 ppb, and 0.75 ppb, respectively. The Copernicus Atmosphere Monitoring Service (CAMS) models gridded concentration fields of the atmospheric composition using assimilated satellite observations, which show excellent agreement of 0:52-0:31 ppm for XCO2, 0:9±4:1 ppb for XCH4, and 3:2-3:4 ppb for XCO (mean difference ± SD, standard deviation, of differences for entire record) with our observations. Likewise, we find excellent agreement to within 2:2±6:6 ppb with the XCO observations of the TROPOspheric MOnitoring Instrument (TROPOMI) on the Sentinel-5 Precursor satellite (S5P). The shipborne measurements are accessible at https://doi.org/10.1594/PANGAEA.917240 (Knapp et al., 2020). © Author(s) 2021

An open-path observatory for greenhouse gases based on near-infrared Fourier transform spectroscopy

Monitoring the atmospheric concentrations of the greenhouse gases (GHG) carbon dioxide (CO$_2$) and methane (CH$_4$) is a key ingredient for fostering our understanding of the mechanisms behind the sources and sinks of these gases and for verifying and quantitatively attributing their anthropogenic emissions. Here, we present the instrumen- tal setup and performance evaluation of an open-path GHG observatory in the city of Heidelberg, Germany. The obser- vatory measures path-averaged concentrations of CO$_2$ and CH$_4$ along a 1.55 km path in the urban boundary layer above the city. We combine these open-path data with local in situ measurements to evaluate the representativeness of these ob- servation types on the kilometer scale. This representative- ness is necessary to accurately quantify emissions, since at- mospheric models tasked with this job typically operate on kilometer-scale horizontal grids. For the operational period between 8 February and 11 July 2023, we find a precision of 2.7 ppm (0.58 %) and 18 ppb (0.89 %) for the dry-air mole fractions of CO$_2$ (xCO$_2$) and CH$_4$ (xCH$_4$) in 5 min measurements, respectively. After bias correction, the open-path measurements show excellent agreement with the local in situ data under atmospheric back- ground conditions. Both datasets show clear signals of traffic CO$_2$ emissions in the diurnal xCO$_2$ cycle. However, there are particular situations, such as under southeasterly wind condi- tions, in which the in situ and open-path data reveal distinct differences up to 20 ppm in xCO$_2$, most likely related to their different sensitivity to local emission and transport patterns. Our setup is based on a Bruker IFS 125HR Fourier trans- form spectrometer, which offers a spacious and modular de- sign providing ample opportunities for future refinements of the technique with respect to finer spectral resolution and wider spectral coverage to provide information on gases such as carbon monoxide and nitrogen dioxide

IL-25 regulates Th17 function in autoimmune inflammation

Interleukin (IL)-25 is a member of the IL-17 family of cytokines. However, unlike the other members of this family, IL-25 promotes T helper (Th) 2 responses. We now show that IL-25 also regulates the development of autoimmune inflammation mediated by IL-17–producing T cells. We have generated IL-25–deficient (il25−/−) mice and found that they are highly susceptible to experimental autoimmune encephalomyelitis (EAE). The accelerated disease in the il25−/− mice is associated with an increase of IL-23 in the periphery and a subsequent increase in the number of inflammatory IL-17–, IFNγ-, and TNF-producing T cells that invade the central nervous system. Neutralization of IL-17 but not IFNγ in il25−/− mice prevented EAE, suggesting that IL-17 is a major disease-promoting factor. IL-25 treatment at several time points during a relapse-remitting model or chronic model of EAE completely suppressed disease. IL-25 treatment induced elevated production of IL-13, which is required for suppression of Th17 responses by direct inhibition of IL-23, IL-1β, and IL-6 expression in activated dendritic cells. Thus, IL-25 and IL-17, being members of the same cytokine family, play opposing roles in the pathogenesis of organ-specific autoimmunity

The requirements for natural Th17 cell development are distinct from those of conventional Th17 cells

A distinct population of Th17 cells develops in the thymus with innate immune cell characteristics, different selection requirements, and skewed TCR gene usage compared with peripheral Th17 cells

An open-path observatory for greenhouse gases based on near-infrared Fourier transform spectroscopy

Monitoring the atmospheric concentrations of the greenhouse gases (GHG) carbon dioxide (CO2) and methane (CH4) is a key ingredient for fostering our understanding of the mechanisms behind the sources and sinks of these gases and for verifying and quantitatively attributing their anthropogenic emissions. Here, we present the instrumental setup and performance evaluation of an open-path GHG observatory in the city of Heidelberg, Germany. The observatory measures path-averaged concentrations of CO2 and CH4 along a 1.55 km path in the urban boundary layer above the city. We combine these open-path data with local in situ measurements to evaluate the representativeness of these observation types on the kilometer scale. This representativeness is necessary to accurately quantify emissions, since atmospheric models tasked with this job typically operate on kilometer-scale horizontal grids. For the operational period between 8 February and 11 July 2023, we find a precision of 2.7 ppm (0.58 %) and 18 ppb (0.89 %) for the dry-air mole fractions of CO2 (xCO2) and CH4 (xCH4) in 5 min measurements, respectively. After bias correction, the open-path measurements show excellent agreement with the local in situ data under atmospheric background conditions. Both datasets show clear signals of traffic CO2 emissions in the diurnal xCO2 cycle. However, there are particular situations, such as under southeasterly wind conditions, in which the in situ and open-path data reveal distinct differences up to 20 ppm in xCO2, most likely related to their different sensitivity to local emission and transport patterns. Our setup is based on a Bruker IFS 125HR Fourier transform spectrometer, which offers a spacious and modular design providing ample opportunities for future refinements of the technique with respect to finer spectral resolution and wider spectral coverage to provide information on gases such as carbon monoxide and nitrogen dioxide.</p

Circulating and gut-resident human Th17 cells express CD161 and promote intestinal inflammation

The C-type lectin-like receptor CD161, which has recently been described to promote T cell expansion, is expressed on a discrete subset of human CD4 T cells. The function of such cells, however, has remained elusive. We now demonstrate that CD161+ CD4 T cells comprise a circulating and gut-resident T helper 17 (Th17) cell population. During Crohn's disease (CD), these CD161+ cells display an activated Th17 phenotype, as indicated by increased expression of interleukin (IL)-17, IL-22, and IL-23 receptor. CD161+ CD4 T cells from CD patients readily produce IL-17 and interferon γ upon stimulation with IL-23, whereas, in healthy subjects, priming by additional inflammatory stimuli such as IL-1β was required to enable IL-23–induced cytokine release. Circulating CD161+ Th17 cells are imprinted for gut homing, as indicated by high levels of CC chemokine receptor 6 and integrin β7 expression. Supporting their colitogenic phenotype, CD161+ Th17 cells were found in increased numbers in the inflammatory infiltrate of CD lesions and induced expression of inflammatory mediators by intestinal cells. Our data identify CD161+ CD4 T cells as a resting Th17 pool that can be activated by IL-23 and mediate destructive tissue inflammation

Contributions of the MyD88-Dependent Receptors IL-18R, IL-1R, and TLR9 to Host Defenses following Pulmonary Challenge with Cryptococcus neoformans

Signaling via the adapter protein, MyD88, is important in the host defense against Cryptococcus neoformans infection. While certain Toll-like receptors (TLRs) can enhance the clearance of Cryptococcus, the contributions of MyD88-dependent, TLR-independent pathways have not been fully investigated. We examined the roles of IL-1R and IL-18R in vivo by challenging C57BL/6 mice with a lethal strain of Cryptococcus. We found that the absence of IL-18R, but not IL-1R, causes a shift in the survival curve following pulmonary delivery of a virulent strain of C. neoformans (H99). Specifically, IL-18R-deficient mice have significantly shorter median survival times compared to wild-type mice following infection. Cytokine analysis of lung homogenates revealed that deficiency of IL-IR, IL-18R, or MyD88 is associated with diminished lung levels of IL-1β. In order to compare these findings with those related to TLR-deficiency, we studied the effects of TLR9-deficiency and found that deficiency of TLR9 also affects the survival curve of mice following challenge with C. neoformans. Yet the lungs from infected TLR9-deficient mice have robust levels of IL-1β. In summary, we found that multiple signaling components can contribute the MyD88-dependent host responses to cryptococcal infection in vivo and each drives distinct pulmonary responses