Symposium franco-chinois de télédétection quantitative en agronomie et environnement. Bilan et perspectives de collaboration. Rapport de mission (26 au 30 mars 2000)

Ce rapport présente les principaux résultats d'un Symposium en Télédétection entre des équipes de chercheurs de l'INRA, du CIRAD, de l'Université de Lille et leurs homologues chinois de l'Institute of Remote Sensing Applications (IRSA) of Chinese Academy of Sciences (CAS), et du National Satellite Meteorological Center (NSMC). Les perspectives d'un programme de collaboration sont présentées avec deux axes majeurs correspondant à deux niveaux d'approche, régional et local en agriculture de précision. (Résumé d'auteur

Development of an optical sensor for real-time weed detection using laser based spectroscopy

The management of weeds in agriculture is a time consuming and expensive activity, including in Australia where the predominant strategy is blanket spraying of herbicides. This approach wastes herbicide by applying it in areas where there are no weeds. Discrimination of different plant species can be performed based on the spectral reflectance of the leaves. This thesis describes the development of a sensor for automatic spot spraying of weeds within crop rows. The sensor records the relative intensity of reflected light in three narrow wavebands using lasers as an illumination source. A prototype weed sensor which had been previously developed was evaluated and redesigned to improve its plant discrimination performance. A line scan image sensor replacement was chosen which reduced the noise in the recorded spectral reflectance properties. The switching speed of the laser sources was increased by replacing the laser drivers. The optical properties of the light source were improved to provide a more uniform illumination across the viewing area of the sensor. A new opto-mechanical system was designed and constructed with the required robustness to operate the weed sensor in outdoor conditions. Independent operation of the sensor was made possible by the development of hardware and software for an embedded controller which operated the opto-electronic components and performed plant discrimination. The first revised prototype was capable of detecting plants at a speed of 10 km/h in outdoor conditions with the sensor attached to a quad bike. However, it was not capable of discriminating different plants. The final prototype included a line scan sensor with increased dynamic range and pixel resolution as well as improved stability of the output laser power. These changes improved the measurement of spectral reflectance properties of plants and provided reliable discrimination of three different broadleaved plants using only three narrow wavelength bands. A field trial with the final prototype demonstrated successful discrimination of these three different plants at 5 km/h when a shroud was used to block ambient light. A survey of spectral reflectance of four crops (sugarcane, cotton, wheat and sorghum) and the weeds growing amongst these crops was conducted to determine the potential for use of the prototype weed sensor to control spot-spraying of herbicides. Visible reflectance spectra were recorded from individual leaves using a fibre spectrometer throughout the growing season for each crop. A discriminant analysis was conducted based on six narrow wavebands extracted from leaf level spectral reflectance measured with a spectrometer. The analysis showed the potential to discriminate cotton and sugarcane fro

Digital mapping of soil properties using multivariate statistical analysis and ASTER data in an Arid Region

Modeling and mapping of soil properties has been identified as key for effective land degradation management and mitigation. The ability to model and map soil properties at sufficient accuracy for a large agriculture area is demonstrated using Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) imagery. Soil samples were collected in the El-Tina Plain, Sinai, Egypt, concurrently with the acquisition of ASTER imagery, and measured for soil electrical conductivity (EC_e), clay content and soil organic matter (OM). An ASTER image covering the study area was preprocessed, and two predictive models, multivariate adaptive regression splines (MARS) and the partial least squares regression (PLSR), were constructed based on the ASTER spectra. For all three soil properties, the results of MARS models were better than those of the respective PLSR models, with cross-validation estimated R^2 of 0.85 and 0.80 for EC_e, 0.94 and 0.90 for clay content and 0.79 and 0.73 for OM. Independent validation of EC_e, clay content and OM maps with 32 soil samples showed the better performance of the MARS models, with R^2 = 0.81, 0.89 and 0.73, respectively, compared to R^2 = 0.78, 0.87 and 0.71 for the PLSR models. The results indicated that MARS is a more suitable and superior modeling technique than PLSR for the estimation and mapping of soil salinity (EC_e), clay content and OM. The method developed in this paper was found to be reliable and accurate for digital soil mapping in arid and semi-arid environments

APPLICATIONS OF UAS IMAGERY IN WHEAT BREEDING

Plant breeding is a field of study with goals that have not changed significantly over time: develop cultivars with high yield, disease resistance, and drought tolerance, to name a few. While the goals of a breeding program may not change frequently, the form and technology used with which those goals are achieved are constantly evolving. High throughput phenotyping (HTP) with unoccupied aerial systems (UAS) shows significant promise in improving how crops are bred. Data collected from UAS can provide a breeder with new insights into how cultivars respond to stress and a particular environment, creating potential use cases for improving other areas of breeding, such as genomic selection and how field experiments are designed and analyzed. These new technologies, however, should not be adopted without consideration. The first study, outlined here, utilized three different HTP platforms and collection methodologies, two ground systems and one UAS-based, to determine if there is a difference in the quality of data collected. Across four years, data collected from ground systems only moderately correlated to UAS. It was also shown that data collected with UAS produced more heritable data than that collected with either ground-based system. While manufacturing specifications of the data collected from remote sensors may be similar, it is essential to be aware of the methodology used in the collection. Reflectance data standardization, sensor platform, and environmental conditions can significantly impact the quality of the data obtained and limit utility across platforms and methodologies. In the second study, spectral reflectance indices (SRI) were evaluated for their ability to improve genomic selection (GS). SRIs collected on 11,593 plots across four years were used with genomic data in univariate models as covariates and in multivariate models as secondary response variables for the assessment of prediction accuracy of grain yield. Including SRI data as covariates in univariate genomic prediction models improved prediction accuracy over the control GS model but was unreliable across years. In multivariate models, SRIs improved prediction performance across years, but due to the dataset size, high-performance computational resources were required, which could limit feasibility in an applied setting. The final study highlights the potential for SRI to improve how a breeder deals with field variability in yield trial experiments. Across three years, 47 breeding trials were evaluated under three spatial analysis strategies: linear models incorporating block-effect, row-column effect, and 2D splines. Model fit was improved across all spatial analysis methods when SRIs were incorporated as covariates. Model fitness was most greatly improved in unreplicated early-generation trials. This study highlighted the potential of SRIs to enhance how breeding trials are analyzed despite extreme environmental variables and climate conditions. This collective research highlights the challenges and benefits of utilizing UAS imagery in an applied breeding pipeline. When used strategically, the insights gained from UAS will, like genomic selection, make it an invaluable tool in the plant breeder's toolbelt

Hyperspectral Imaging for Fine to Medium Scale Applications in Environmental Sciences

The aim of the Special Issue “Hyperspectral Imaging for Fine to Medium Scale Applications in Environmental Sciences” was to present a selection of innovative studies using hyperspectral imaging (HSI) in different thematic fields. This intention reflects the technical developments in the last three decades, which have brought the capacity of HSI to provide spectrally, spatially and temporally detailed data, favoured by e.g., hyperspectral snapshot technologies, miniaturized hyperspectral sensors and hyperspectral microscopy imaging. The present book comprises a suite of papers in various fields of environmental sciences—geology/mineral exploration, digital soil mapping, mapping and characterization of vegetation, and sensing of water bodies (including under-ice and underwater applications). In addition, there are two rather methodically/technically-oriented contributions dealing with the optimized processing of UAV data and on the design and test of a multi-channel optical receiver for ground-based applications. All in all, this compilation documents that HSI is a multi-faceted research topic and will remain so in the future

Detection of interannual vegetation responses to climatic variability using AVIRIS data in a coastal savanna in California

11 pages, 10 figures.Ecosystem responses to interannual weather variability are large and superimposed over any long-term directional climatic responses making it difficult to assign causal relationships to vegetation change. Better understanding of ecosystem responses to interannual climatic variability is crucial to predicting long-term functioning and stability. Hyperspectral data have the potential to detect ecosystem responses that are undetected by broadband sensors and can be used to scale to coarser resolution global mapping sensors, e.g., advanced very high resolution radiometer (AVHRR) and MODIS. This research focused on detecting vegetation responses to interannual climate using the airborne visible-infrared imaging spectrometer (AVIRIS) data over a natural savanna in the Central Coast Range in California. Results of linear spectral mixture analysis and assessment of the model errors were compared for two AVIRIS images acquired in spring of a dry and a wet year. The results show that mean unmixed fractions for these vegetation types were not significantly different between years due to the high spatial variability within the landscape. However, significant community differences were found between years on a pixel basis, underlying the importance of site-specific analysis. Multitemporal hyperspectral coverage is necessary to understand vegetation dynamics.This work was supported in part by Foundation Barrie de la Maza, Spain, and NASA EOS Program Grant NAS5-31359.Peer reviewe

COMPARISON OF VERY NEAR INFRARED (VNIR) WAVELENGTH FROM EO-1 HYPERION AND WORLDVIEW 2 IMAGES FOR SALTMARSH CLASSIFICATION

Saltmarsh is one of the important communities of wetlands. Due to a range of pressures, it has been declared as an EEC (Ecological Endangered Community) in Australia. In order to correctly identify different saltmarsh species, development of distinct spectral characteristics is essential to monitor this EEC. This research was conducted to classify saltmarsh species based on spectral characteristics in the VNIR wavelength of Hyperion Hyperspectral and Worldview 2 multispectral remote sensing data. Signal Noise Ratio (SNR) and Principal Component Analysis (PCA) were applied in Hyperion data to test data quality and to reduce data dimensionality respectively. FLAASH atmospheric correction was done to get surface reflectance data. Based on spectral and spatial information a supervised classification followed by Mapping Accuracy (%) was used to assess the classification result. SNR of Hyperion data was varied according to season and wavelength and it was higher for all land cover in VNIR wavelength. There was a significant difference between radiance and reflectance spectra. It was found that atmospheric correction improves the spectral information. Based on the PCA of 56 VNIR band of Hyperion, it was possible to segregate 16 bands that contain 99.83 % variability. Based on reference 16 bands were compared with 8 bands of Worldview 2 for classification accuracy. Overall Accuracy (OA) % for Worldview 2 was increased from 72 to 79 while for Hyperion, it was increased from 70.47 to 71.66 when bands were added orderly. Considering the significance test with z values and kappa statistics at 95% confidence level, Worldview 2 classification accuracy was higher than Hyperion data