Multiscale Information Decomposition: Exact Computation for Multivariate Gaussian Processes

Exploiting the theory of state space models, we derive the exact expressions of the information transfer, as well as redundant and synergistic transfer, for coupled Gaussian processes observed at multiple temporal scales. All of the terms, constituting the frameworks known as interaction information decomposition and partial information decomposition, can thus be analytically obtained for different time scales from the parameters of the VAR model that fits the processes. We report the application of the proposed methodology firstly to benchmark Gaussian systems, showing that this class of systems may generate patterns of information decomposition characterized by mainly redundant or synergistic information transfer persisting across multiple time scales or even by the alternating prevalence of redundant and synergistic source interaction depending on the time scale. Then, we apply our method to an important topic in neuroscience, i.e., the detection of causal interactions in human epilepsy networks, for which we show the relevance of partial information decomposition to the detection of multiscale information transfer spreading from the seizure onset zone

Characteristics and coupling of cardiac and locomotor rhythms during treadmill walking tasks

Studying the variability of physiological subsystems (e.g., cardiac and locomotor control systems) has been insightful in understanding how functional and dysfunctional patterns emerge within their behaviors. The coupling of these subsystems (termed cardiolocomotor coupling) is believed to be important to maintain healthy functioning in the diverse conditions in which individuals must operate. Aging and pathology result in alterations to both the patterns of individual systems, as well as to how those systems couple to each other. By examining cardiac and locomotor rhythms concurrently during treadmill walking, it is possible to ascertain how these two rhythms relate to each other in different populations (i.e., younger and older adults) and with varying task constraints (i.e., a gait synchronization task or fast walking task). The purpose of this research was to simultaneously document the characteristics of cardiac and gait rhythms in younger (18-35 yrs) and older (63-80 yrs) healthy adults while walking and to establish the extent to which changes in these systems are coupled when gait is constrained. This study consisted of two repeated-measures experiments that participants completed on two separate days. Both experiments consisted of three 15-minute phases. During the first (baseline) and third (retention) phases of both experiments, participants walked with no cues or specific instructions at their preferred walking speed. During the second phase, participants were asked to synchronize their step falls to the timing of a visual cue (experiment 1) or to walk at 125% of their preferred walking speed (experiment 2). Fifty-one healthy adults (26 older, 67.67±4.70 yrs, 1.72±0.09 m, 70.13±14.30 kg; 25 younger, 24.57±4.29 yrs, 1.76±0.09 m, 73.34±15.35 kg) participated in this study. Participants’ cardiac rhythms (R-R interval time series) and locomotor rhythms (stride interval, step width, and step length time series) were measured while walking on a treadmill. Characteristics of variability in cardiac and locomotor rhythms and the coupling between cardiac and gait rhythms were measured. Results revealed that younger and older healthy adults alter gait patterns similarly when presented with a gait synchronization or fast walking task and that these tasks also alter cardiac patterns. Likewise, both groups exhibited enhanced cardiolocomotor coupling when tasked with a step timing constraint or increased speed during treadmill walking. Combined, these findings suggest that walking tasks likely alter both locomotor and cardiac dynamics and the coupling of physiological subsystems could be insightful in understanding the diverse effects aging and pathology have on individuals

Bits from Biology for Computational Intelligence

Computational intelligence is broadly defined as biologically-inspired computing. Usually, inspiration is drawn from neural systems. This article shows how to analyze neural systems using information theory to obtain constraints that help identify the algorithms run by such systems and the information they represent. Algorithms and representations identified information-theoretically may then guide the design of biologically inspired computing systems (BICS). The material covered includes the necessary introduction to information theory and the estimation of information theoretic quantities from neural data. We then show how to analyze the information encoded in a system about its environment, and also discuss recent methodological developments on the question of how much information each agent carries about the environment either uniquely, or redundantly or synergistically together with others. Last, we introduce the framework of local information dynamics, where information processing is decomposed into component processes of information storage, transfer, and modification -- locally in space and time. We close by discussing example applications of these measures to neural data and other complex systems

Advances in point process filters and their application to sympathetic neural activity

This thesis is concerned with the development of techniques for analyzing the sequences of stereotypical electrical impulses within neurons known as spikes. Sequences of spikes, also called spike trains, transmit neural information; decoding them often provides details about the physiological processes generating the neural activity. Here, the statistical theory of event arrivals, called point processes, is applied to human muscle sympathetic spike trains, a peripheral nerve signal responsible for cardiovascular regulation. A novel technique that uses observed spike trains to dynamically derive information about the physiological processes generating them is also introduced. Despite the emerging usage of individual spikes in the analysis of human muscle sympathetic nerve activity, the majority of studies in this field remain focused on bursts of activity at or below cardiac rhythm frequencies. Point process theory applied to multi-neuron spike trains captured both fast and slow spiking rhythms. First, analysis of high-frequency spiking patterns within cardiac cycles was performed and, surprisingly, revealed fibers with no cardiac rhythmicity. Modeling spikes as a function of average firing rates showed that individual nerves contribute substantially to the differences in the sympathetic stressor response across experimental conditions. Subsequent investigation of low-frequency spiking identified two physiologically relevant frequency bands, and modeling spike trains as a function of hemodynamic variables uncovered complex associations between spiking activity and biophysical covariates at these two frequencies. For example, exercise-induced neural activation enhances the relationship of spikes to respiration but does not affect the extremely precise alignment of spikes to diastolic blood pressure. Additionally, a novel method of utilizing point process observations to estimate an internal state process with partially linear dynamics was introduced. Separation of the linear components of the process model and reduction of the sampled space dimensionality improved the computational efficiency of the estimator. The method was tested on an established biophysical model by concurrently computing the dynamic electrical currents of a simulated neuron and estimating its conductance properties. Computational load reduction, improved accuracy, and applicability outside neuroscience establish the new technique as a valuable tool for decoding large dynamical systems with linear substructure and point process observations

An investigation into the relationship between locomotor dynamics and adaptability

Over the last 40 years, a new paradigm has been posited where the variability observed in physiological systems is a consequence of the interactions occurring between the various components that affect the system. While quantifying the magnitude of variability can be useful, analyses that measure how the structure of the variability (dynamics) changes over time have been posited to reflect the health of the system. Many researchers interpret the results of these analyses to be indicative of the system’s adaptive capacity. While there is ample indirect evidence to support this notion, a lack of direct findings has left the literature lacking a definitive foundation to move forward with this interpretation. While many physiological systems are too invasive to safely perturb, the movement-based systems are routinely perturbed in real-world environments without dire consequences. Of particular interest is the locomotor system, which is constantly challenged in real-world environments via slips and trips. Furthermore, the locomotor system can be safely and validly perturbed in the laboratory. A range of locomotor dynamics-based measures have been used to describe differences between various clinical populations, but none have been directly associated with a person’s ability to remain upright when perturbed. The objectives of this study are to (1) examine the relationship between locomotor dynamics/stability to overall fall-risk prior, (2) examine how locomotor dynamics relate to the ability to recover from a trip via global stability, and (3) determine the extent to which an acute trip-training session alters locomotor dynamics and global stability. Forty healthy, older adults (75.2±4.9 yrs) were recruited by convenience from the local community. The participants completed a variety of clinical assessments in order to determine overall fall-risk. Afterwards, they participated in three walking trials consisting of: 1) a 15-minute unperturbed walking session, 2) a 10-minute unperturbed walking session (control) or a 10-minute trip-training session (intervention), and 3) a 15-minute unperturbed walking session. Various measurements of locomotor dynamics and adaptability were calculated from full-body 3-D kinematics collected at 100Hz. Multiple regression and repeated measure analysis of variance models were calculated to determine to what extent locomotor dynamics and adaptability relate to one another and how an acute trip-training session affects their relationship. The results from our first experiment suggested that locomotor dynamics and stability during steady state do not significantly relate to overall fall-risk. However, the second experiment showed that locomotor dynamics are predictive of an individual’s ability to recover from a trip. Our last experiment showed the feasibility of using an acute trip-training session to alter locomotor dynamics and stability. These data represent the first direct evidence of physiological variability being indicative of adaptive capacity in the locomotor system. Further investigation will be necessary to determine the robustness of the analyses to indicate adaptive capacity across perturbations and populations

Information-theoretic Reasoning in Distributed and Autonomous Systems

The increasing prevalence of distributed and autonomous systems is transforming decision making in industries as diverse as agriculture, environmental monitoring, and healthcare. Despite significant efforts, challenges remain in robustly planning under uncertainty. In this thesis, we present a number of information-theoretic decision rules for improving the analysis and control of complex adaptive systems. We begin with the problem of quantifying the data storage (memory) and transfer (communication) within information processing systems. We develop an information-theoretic framework to study nonlinear interactions within cooperative and adversarial scenarios, solely from observations of each agent's dynamics. This framework is applied to simulations of robotic soccer games, where the measures reveal insights into team performance, including correlations of the information dynamics to the scoreline. We then study the communication between processes with latent nonlinear dynamics that are observed only through a filter. By using methods from differential topology, we show that the information-theoretic measures commonly used to infer communication in observed systems can also be used in certain partially observed systems. For robotic environmental monitoring, the quality of data depends on the placement of sensors. These locations can be improved by either better estimating the quality of future viewpoints or by a team of robots operating concurrently. By robustly handling the uncertainty of sensor model measurements, we are able to present the first end-to-end robotic system for autonomously tracking small dynamic animals, with a performance comparable to human trackers. We then solve the issue of coordinating multi-robot systems through distributed optimisation techniques. These allow us to develop non-myopic robot trajectories for these tasks and, importantly, show that these algorithms provide guarantees for convergence rates to the optimal payoff sequence

On Neuromechanical Approaches for the Study of Biological Grasp and Manipulation

Biological and robotic grasp and manipulation are undeniably similar at the level of mechanical task performance. However, their underlying fundamental biological vs. engineering mechanisms are, by definition, dramatically different and can even be antithetical. Even our approach to each is diametrically opposite: inductive science for the study of biological systems vs. engineering synthesis for the design and construction of robotic systems. The past 20 years have seen several conceptual advances in both fields and the quest to unify them. Chief among them is the reluctant recognition that their underlying fundamental mechanisms may actually share limited common ground, while exhibiting many fundamental differences. This recognition is particularly liberating because it allows us to resolve and move beyond multiple paradoxes and contradictions that arose from the initial reasonable assumption of a large common ground. Here, we begin by introducing the perspective of neuromechanics, which emphasizes that real-world behavior emerges from the intimate interactions among the physical structure of the system, the mechanical requirements of a task, the feasible neural control actions to produce it, and the ability of the neuromuscular system to adapt through interactions with the environment. This allows us to articulate a succinct overview of a few salient conceptual paradoxes and contradictions regarding under-determined vs. over-determined mechanics, under- vs. over-actuated control, prescribed vs. emergent function, learning vs. implementation vs. adaptation, prescriptive vs. descriptive synergies, and optimal vs. habitual performance. We conclude by presenting open questions and suggesting directions for future research. We hope this frank assessment of the state-of-the-art will encourage and guide these communities to continue to interact and make progress in these important areas

Aerospace medicine and biology: A continuing bibliography with indexes (supplement 355)

This bibliography lists 147 reports, articles and other documents introduced into the NASA Scientific and Technical Information System during October, 1991. Subject coverage includes: aerospace medicine and psychology, life support systems and controlled environments, safety equipment, exobiology and extraterrestrial life, and flight crew behavior and performance