Framework development for providing accessibility to qualitative spatial calculi

Dissertation submitted in partial fulfillment of the requirements for the Degree of Master of Science in Geospatial Technologies.Qualitative spatial reasoning deals with knowledge about an infinite spatial domain using a finite set of qualitative relations without using numerical computation. Qualitative knowledge is relative knowledge where we obtain the knowledge on the basis of comparison of features with in the object domain rather then using some external scales. Reasoning is an intellectual facility by which, conclusions are drawn from premises and is present in our everyday interaction with the geographical world. The kind of reasoning that human being relies on is based on commonsense knowledge in everyday situations. During the last decades a multitude of formal calculi over spatial relations have been proposed by focusing on different aspects of space like topology, orientation and distance. Qualitative spatial reasoning engines like SparQ and GQR represents space and reasoning about the space based on qualitative spatial relations and bring qualitative reasoning closer to the geographic applications. Their relations and certain operations defined in qualitative calculi use to infer new knowledge on different aspects of space. Today GIS does not support common-sense reasoning due to limitation for how to formalize spatial inferences. It is important to focus on common sense geographic reasoning, reasoning as it is performed by human. Human perceive and represents geographic information qualitatively, the integration of reasoner with spatial application enables GIS users to represent and extract geographic information qualitatively using human understandable query language. In this thesis, I designed and developed common API framework using platform independent software like XML and JAVA that used to integrate qualitative spatial reasoning engines (SparQ) with GIS application. SparQ is set of modules that structured to provides different reasoning services. SparQ supports command line instructions and it has a specific syntax as set of commands. The developed API provides interface between GIS application and reasoning engine. It establishes connection with reasoner over TCP/IP, takes XML format queries as input from GIS application and converts into SparQ module specific syntax. Similarly it extracts given result, converts it into defined XML format and passes it to GIS application over the same TCP/IP connection. The most challenging part of thesis was SparQ syntax analysis for inputs and their outputs. Each module in Sparq takes module specific query syntax and generates results in multiple syntaxes like; error, simple result and result with comments. Reasoner supports both binary and ternary calculi. The input query syntax for binary-calculi is different for ternary-calculi in the terms of constraint-networks. Based on analysis I, identified commonalities between input query syntaxes for both binary and ternary calculi and designed XML structures for them. Similarly I generalized SparQ results into five major categories and designed XML structures. For ternary-calculi, I considered constraint-reasoning module and their specific operations and designed XML structure for both of their inputs and outputs

Dagstuhl News January - December 2008

"Dagstuhl News" is a publication edited especially for the members of the Foundation "Informatikzentrum Schloss Dagstuhl" to thank them for their support. The News give a summary of the scientific work being done in Dagstuhl. Each Dagstuhl Seminar is presented by a small abstract describing the contents and scientific highlights of the seminar as well as the perspectives or challenges of the research topic

Using spatiotemporal patterns to qualitatively represent and manage dynamic situations of interest : a cognitive and integrative approach

Les situations spatio-temporelles dynamiques sont des situations qui évoluent dans l’espace et dans le temps. L’être humain peut identifier des configurations de situations dans son environnement et les utilise pour prendre des décisions. Ces configurations de situations peuvent aussi être appelées « situations d’intérêt » ou encore « patrons spatio-temporels ». En informatique, les situations sont obtenues par des systèmes d’acquisition de données souvent présents dans diverses industries grâce aux récents développements technologiques et qui génèrent des bases de données de plus en plus volumineuses. On relève un problème important dans la littérature lié au fait que les formalismes de représentation utilisés sont souvent incapables de représenter des phénomènes spatiotemporels dynamiques et complexes qui reflètent la réalité. De plus, ils ne prennent pas en considération l’appréhension cognitive (modèle mental) que l’humain peut avoir de son environnement. Ces facteurs rendent difficile la mise en œuvre de tels modèles par des agents logiciels. Dans cette thèse, nous proposons un nouveau modèle de représentation des situations d’intérêt s’appuyant sur la notion des patrons spatiotemporels. Notre approche utilise les graphes conceptuels pour offrir un aspect qualitatif au modèle de représentation. Le modèle se base sur les notions d’événement et d’état pour représenter des phénomènes spatiotemporels dynamiques. Il intègre la notion de contexte pour permettre aux agents logiciels de raisonner avec les instances de patrons détectés. Nous proposons aussi un outil de génération automatisée des relations qualitatives de proximité spatiale en utilisant un classificateur flou. Finalement, nous proposons une plateforme de gestion des patrons spatiotemporels pour faciliter l’intégration de notre modèle dans des applications industrielles réelles. Ainsi, les contributions principales de notre travail sont : Un formalisme de représentation qualitative des situations spatiotemporelles dynamiques en utilisant des graphes conceptuels. ; Une approche cognitive pour la définition des patrons spatio-temporels basée sur l’intégration de l’information contextuelle. ; Un outil de génération automatique des relations spatiales qualitatives de proximité basé sur les classificateurs neuronaux flous. ; Une plateforme de gestion et de détection des patrons spatiotemporels basée sur l’extension d’un moteur de traitement des événements complexes (Complex Event Processing).Dynamic spatiotemporal situations are situations that evolve in space and time. They are part of humans’ daily life. One can be interested in a configuration of situations occurred in the environment and can use it to make decisions. In the literature, such configurations are referred to as “situations of interests” or “spatiotemporal patterns”. In Computer Science, dynamic situations are generated by large scale data acquisition systems which are deployed everywhere thanks to recent technological advances. Spatiotemporal pattern representation is a research subject which gained a lot of attraction from two main research areas. In spatiotemporal analysis, various works extended query languages to represent patterns and to query them from voluminous databases. In Artificial Intelligence, predicate-based models represent spatiotemporal patterns and detect their instances using rule-based mechanisms. Both approaches suffer several shortcomings. For example, they do not allow for representing dynamic and complex spatiotemporal phenomena due to their limited expressiveness. Furthermore, they do not take into account the human’s mental model of the environment in their representation formalisms. This limits the potential of building agent-based solutions to reason about these patterns. In this thesis, we propose a novel approach to represent situations of interest using the concept of spatiotemporal patterns. We use Conceptual Graphs to offer a qualitative representation model of these patterns. Our model is based on the concepts of spatiotemporal events and states to represent dynamic spatiotemporal phenomena. It also incorporates contextual information in order to facilitate building the knowledge base of software agents. Besides, we propose an intelligent proximity tool based on a neuro-fuzzy classifier to support qualitative spatial relations in the pattern model. Finally, we propose a framework to manage spatiotemporal patterns in order to facilitate the integration of our pattern representation model to existing applications in the industry. The main contributions of this thesis are as follows: A qualitative approach to model dynamic spatiotemporal situations of interest using Conceptual Graphs. ; A cognitive approach to represent spatiotemporal patterns by integrating contextual information. ; An automated tool to generate qualitative spatial proximity relations based on a neuro-fuzzy classifier. ; A platform for detection and management of spatiotemporal patterns using an extension of a Complex Event Processing engine

30th International Conference on Information Modelling and Knowledge Bases

Information modelling is becoming more and more important topic for researchers, designers, and users of information systems. The amount and complexity of information itself, the number of abstraction levels of information, and the size of databases and knowledge bases are continuously growing. Conceptual modelling is one of the sub-areas of information modelling. The aim of this conference is to bring together experts from different areas of computer science and other disciplines, who have a common interest in understanding and solving problems on information modelling and knowledge bases, as well as applying the results of research to practice. We also aim to recognize and study new areas on modelling and knowledge bases to which more attention should be paid. Therefore philosophy and logic, cognitive science, knowledge management, linguistics and management science are relevant areas, too. In the conference, there will be three categories of presentations, i.e. full papers, short papers and position papers

Developing Android Mobile Map Application with standard navigation tools for pedestrians

Advanced features of modern mobile devices have made it possible to develop and use maps and map based applications for navigation purposes. Since most mobile map applications nowadays are developed for motor vehicles, there is a demand for portable pedestrian navigation applications. In this thesis the Android mobile map application with standard navigation tools for pedestrian navigation was developed, as a platform for facilitating the Lund Challenge location based demonstrator of the HaptiMap project. The pivotal aim of the Lund Challenge demonstrator is to make the sights of Lund city more accessible. The mobile phone application is being designed as a touristic, historical location based game which will also assist tourists to navigate themselves in the city. To enable exploration of historical and current sites of Lund the demonstrator should contain basic components of exploring and way finding. Prior to the development the OpenStreetMap (OSM) road network data and Swedish National Road Database (NVDB) were introduced. The main advantage of using the OSM data over the NVDB dataset is the completeness of the OSM data in terms of pedestrian paths. The datasets were imported to PostgreSQL spatially extended PostGIS database, where different routing algorithms provided by pgRouting were used for routing calculations. As the Lund Challenge demonstrator is intended not only for general users but also for visually impaired users, the problem of user navigation in the parks and open areas were also discussed and the feasibility study was performed. The limitation of the developed application was the problem of the user navigation in the parks and open areas. It is therefore necessary to upgrade the road database with possible path in the open areas and parks in order to implement this application.Advanced features of modern devices have made it possible to develop and use maps and map-based applications for navigation purposes. Since most mobile map applications are currently developed for motor vehicles, there is a demand for portable pedestrian navigation applications. In this thesis, a mobile map application was developed with standard navigation tools for pedestrians, which can be used with mobile phones running Android Operating System. The application will be used as a platform for facilitating the Lund Challenge location based demonstrator. Lund Challenge location based demonstrator is designed to make historical and actual maps of Lund more accessible and is a part of the HaptiMap project. This project aims to create maps and develop location-based services for all users, including elderly and visually impaired. The goal of the Lund Challenge location based demonstrator (also known as The Lund Time Machine) is to minimize the efforts of pedestrians, especially tourists, with finding interesting sites around the city. Initially, it is being designed as a historical location based game which will assist tourists to navigate themselves around the city. In order to further explore historical and current sites, the Lund Challenge should be enhanced with the basic features of exploration and navigation included in this thesis. The road network data was chosen from two available sources: 1) data from OpenStreetMap (OSM) project which provides free geographic data, and 2) The Swedish National Road Database (NVDB) authorized by the Swedish government, which includes all Swedish road network and selected cycle paths. For this thesis, analysis was performed on the datasets using different shortest path algorithms for routing calculations. A primary advantage of using OSM over NVDB is the completeness of data relating to pedestrian paths. As a result, the determination was made that the OSM option was more appropriate for the purpose of this thesis. Since the Lund Challenge location based demonstrator is intended for both general and visually impaired users, the problem of user navigation in parks and open areas was also discussed and a feasibility study was performed. This study revealed a limitation in the application with user navigation in parks and open areas. To resolve this, it is necessary to upgrade the road network with all possible pedestrian paths for parks and open areas

A diversity-aware computational framework for systems biology

L'abstract è presente nell'allegato / the abstract is in the attachmen

Exploiting Latent Features of Text and Graphs

As the size and scope of online data continues to grow, new machine learning techniques become necessary to best capitalize on the wealth of available information. However, the models that help convert data into knowledge require nontrivial processes to make sense of large collections of text and massive online graphs. In both scenarios, modern machine learning pipelines produce embeddings --- semantically rich vectors of latent features --- to convert human constructs for machine understanding. In this dissertation we focus on information available within biomedical science, including human-written abstracts of scientific papers, as well as machine-generated graphs of biomedical entity relationships. We present the Moliere system, and our method for identifying new discoveries through the use of natural language processing and graph mining algorithms. We propose heuristically-based ranking criteria to augment Moliere, and leverage this ranking to identify a new gene-treatment target for HIV-associated Neurodegenerative Disorders. We additionally focus on the latent features of graphs, and propose a new bipartite graph embedding technique. Using our graph embedding, we advance the state-of-the-art in hypergraph partitioning quality. Having newfound intuition of graph embeddings, we present Agatha, a deep-learning approach to hypothesis generation. This system learns a data-driven ranking criteria derived from the embeddings of our large proposed biomedical semantic graph. To produce human-readable results, we additionally propose CBAG, a technique for conditional biomedical abstract generation

IDEAS-1997-2021-Final-Programs

This document records the final program for each of the 26 meetings of the International Database and Engineering Application Symposium from 1997 through 2021. These meetings were organized in various locations on three continents. Most of the papers published during these years are in the digital libraries of IEEE(1997-2007) or ACM(2008-2021)