Automated Fragmentary Bone Matching

Identification, reconstruction and matching of fragmentary bones are basic tasks required to accomplish quantification and analysis of fragmentary human remains derived from forensic contexts. Appropriate techniques for three-dimensional surface matching have received great attention in computer vision literature, and various methods have been proposed for matching fragmentary meshes; however, many of these methods lack automation, speed and/or suffer from high sensitivity to noise. In addition, reconstruction of fragementary bones along with identification in the presence of reference model to compare with in an automatic scheme have not been addressed. In order to address these issues, we used a multi-stage technique for fragment identification, matching and registration. The study introduces an automated technique for matching of fragmentary human skeletal remains for improving forensic anthropology practice and policy. The proposed technique involves creation of surfaces models for the fragmentary elements which can be done using computerized tomographic scans followed by segmentation. Upon creation of the fragmentary elements models, the models go through feature extraction technique where the surface roughness map of each model is measured using local shape analysis measures. Adaptive thesholding is then used to extract model features. A multi-stage technique is then used to identify, match and register bone fragments to their corresponding template bone model. First, extracted features are used for matching with different template bone models using iterative closest point algorithm with different positions and orientations. The best match score, in terms of minimum root-mean-square error, is used along with the position and orientation and the resulting transformation to register the fragment bone model with the corresponding template bone model using iterative closest point algorithm

Livrable D2.2 of the PERSEE project : Analyse/Synthese de Texture

Livrable D2.2 du projet ANR PERSEECe rapport a été réalisé dans le cadre du projet ANR PERSEE (n° ANR-09-BLAN-0170). Exactement il correspond au livrable D2.2 du projet. Son titre : Analyse/Synthese de Textur

Computer-assisted detection of lung cancer nudules in medical chest X-rays

Diagnostic medicine was revolutionized in 1895 with Rontgen's discovery of x-rays. X-ray photography has played a very prominent role in diagnostics of all kinds since then and continues to do so. It is true that more sophisticated and successful medical imaging systems are available. These include Magnetic Resonance Imaging (MRI), Computerized Tomography (CT) and Positron Emission Tomography (PET). However, the hardware instalment and operation costs of these systems remain considerably higher than x-ray systems. Conventional x-ray photography also has the advantage of producing an image in significantly less time than MRI, CT and PET. X-ray photography is still used extensively, especially in third world countries. The routine diagnostic tool for chest complaints is the x-ray. Lung cancer may be diagnosed by the identification of a lung cancer nodule in a chest x-ray. The cure of lung cancer depends upon detection and diagnosis at an early stage. Presently the five-year survival rate of lung cancer patients is approximately 10%. If lung cancer can be detected when the tumour is still small and localized, the five-year survival rate increases to about 40%. However, currently only 20% of lung cancer cases are diagnosed at this early stage. Giger et al wrote that "detection and diagnosis of cancerous lung nodules in chest radiographs are among the most important and difficult tasks performed by radiologists"

Component separation methods for the Planck mission

The Planck satellite will map the full sky at nine frequencies from 30 to 857 GHz. The CMB intensity and polarization that are its prime targets are contaminated by foreground emission. The goal of this paper is to compare proposed methods for separating CMB from foregrounds based on their different spectral and spatial characteristics, and to separate the foregrounds into components of different physical origin. A component separation challenge has been organized, based on a set of realistically complex simulations of sky emission. Several methods including those based on internal template subtraction, maximum entropy method, parametric method, spatial and harmonic cross correlation methods, and independent component analysis have been tested. Different methods proved to be effective in cleaning the CMB maps from foreground contamination, in reconstructing maps of diffuse Galactic emissions, and in detecting point sources and thermal Sunyaev-Zeldovich signals. The power spectrum of the residuals is, on the largest scales, four orders of magnitude lower than that of the input Galaxy power spectrum at the foreground minimum. The CMB power spectrum was accurately recovered up to the sixth acoustic peak. The point source detection limit reaches 100 mJy, and about 2300 clusters are detected via the thermal SZ effect on two thirds of the sky. We have found that no single method performs best for all scientific objectives. We foresee that the final component separation pipeline for Planck will involve a combination of methods and iterations between processing steps targeted at different objectives such as diffuse component separation, spectral estimation and compact source extraction.Comment: Matches version accepted by A&A. A version with high resolution figures is available at http://people.sissa.it/~leach/compsepcomp.pd

Robust Algorithms for Registration of 3D Images of Human Brain

This thesis is concerned with the process of automatically aligning 3D medical images of human brain. It concentrates on rigid-body matching of Positron Emission Tomography images (PET) and Magnetic Resonance images (MR) within one patient and on non-linear matching of PET images of different patients. In recent years, mutual information has proved to be an excellent criterion for automatic registration of intra-individual images from different modalities. We propose and evaluate a method that combines a multi-resolution optimization of mutual information with an efficient segmentation of background voxels and a modified principal axes algorithm. We show that an acceleration factor of 6-7 can be achieved without loss of accuracy and that the method significantly reduces the rate of unsuccessful registrations. Emphasis was also laid on creation of an automatic registration system that could be used routinely in clinical environment. Non-linear registration tries to reduce the inter-individual variability of shape and structure between two brain images by deforming one image so that homologous regions in both images get aligned. It is an important step of many procedures in medical image processing and analysis. We present a novel algorithm for an automatic non-linear registration of PET images based on hierarchical volume subdivisions and local affine optimizations. It produces a C2-continuous deformation function and guarantees that the deformation is one-to-one. Performance of the algorithm was evaluated on more than 600 clinical PET images

Review on Optic Disc Localization Techniques

The optic disc (OD) is one of the important part of the eye for detecting various diseases such as Diabetic Retinopathy and Glaucoma. The localization of optic disc is extremely important for determining hard exudates and lesions. Diagnosis of the disease can prevent people from vision loss. This paper analyzes various techniques which are proposed by different authors for the exact localization of optic disc to prevent vision loss

Contextual cropping and scaling of TV productions

This is the author's accepted manuscript. The final publication is available at Springer via http://dx.doi.org/10.1007/s11042-011-0804-3. Copyright @ Springer Science+Business Media, LLC 2011.In this paper, an application is presented which automatically adapts SDTV (Standard Definition Television) sports productions to smaller displays through intelligent cropping and scaling. It crops regions of interest of sports productions based on a smart combination of production metadata and systematic video analysis methods. This approach allows a context-based composition of cropped images. It provides a differentiation between the original SD version of the production and the processed one adapted to the requirements for mobile TV. The system has been comprehensively evaluated by comparing the outcome of the proposed method with manually and statically cropped versions, as well as with non-cropped versions. Envisaged is the integration of the tool in post-production and live workflows

Automatic human face detection in color images

Automatic human face detection in digital image has been an active area of research over the past decade. Among its numerous applications, face detection plays a key role in face recognition system for biometric personal identification, face tracking for intelligent human computer interface (HCI), and face segmentation for object-based video coding. Despite significant progress in the field in recent years, detecting human faces in unconstrained and complex images remains a challenging problem in computer vision. An automatic system that possesses a similar capability as the human vision system in detecting faces is still a far-reaching goal. This thesis focuses on the problem of detecting human laces in color images. Although many early face detection algorithms were designed to work on gray-scale Images, strong evidence exists to suggest face detection can be done more efficiently by taking into account color characteristics of the human face. In this thesis, we present a complete and systematic face detection algorithm that combines the strengths of both analytic and holistic approaches to face detection. The algorithm is developed to detect quasi-frontal faces in complex color Images. This face class, which represents typical detection scenarios in most practical applications of face detection, covers a wide range of face poses Including all in-plane rotations and some out-of-plane rotations. The algorithm is organized into a number of cascading stages including skin region segmentation, face candidate selection, and face verification. In each of these stages, various visual cues are utilized to narrow the search space for faces. In this thesis, we present a comprehensive analysis of skin detection using color pixel classification, and the effects of factors such as the color space, color classification algorithm on segmentation performance. We also propose a novel and efficient face candidate selection technique that is based on color-based eye region detection and a geometric face model. This candidate selection technique eliminates the computation-intensive step of window scanning often employed In holistic face detection, and simplifies the task of detecting rotated faces. Besides various heuristic techniques for face candidate verification, we developface/nonface classifiers based on the naive Bayesian model, and investigate three feature extraction schemes, namely intensity, projection on face subspace and edge-based. Techniques for improving face/nonface classification are also proposed, including bootstrapping, classifier combination and using contextual information. On a test set of face and nonface patterns, the combination of three Bayesian classifiers has a correct detection rate of 98.6% at a false positive rate of 10%. Extensive testing results have shown that the proposed face detector achieves good performance in terms of both detection rate and alignment between the detected faces and the true faces. On a test set of 200 images containing 231 faces taken from the ECU face detection database, the proposed face detector has a correct detection rate of 90.04% and makes 10 false detections. We have found that the proposed face detector is more robust In detecting in-plane rotated laces, compared to existing face detectors. +D2