Quantifying the urban forest environment using dense discrete return LiDAR and aerial color imagery for segmentation and object-level biomass assessment

The urban forest is becoming increasingly important in the contexts of urban green space and recreation, carbon sequestration and emission offsets, and socio-economic impacts. In addition to aesthetic value, these green spaces remove airborne pollutants, preserve natural resources, and mitigate adverse climate changes, among other benefits. A great deal of attention recently has been paid to urban forest management. However, the comprehensive monitoring of urban vegetation for carbon sequestration and storage is an under-explored research area. Such an assessment of carbon stores often requires information at the individual tree level, necessitating the proper masking of vegetation from the built environment, as well as delineation of individual tree crowns. As an alternative to expensive and time-consuming manual surveys, remote sensing can be used effectively in characterizing the urban vegetation and man-made objects. Many studies in this field have made use of aerial and multispectral/hyperspectral imagery over cities. The emergence of light detection and ranging (LiDAR) technology, however, has provided new impetus to the effort of extracting objects and characterizing their 3D attributes - LiDAR has been used successfully to model buildings and urban trees. However, challenges remain when using such structural information only, and researchers have investigated the use of fusion-based approaches that combine LiDAR and aerial imagery to extract objects, thereby allowing the complementary characteristics of the two modalities to be utilized. In this study, a fusion-based classification method was implemented between high spatial resolution aerial color (RGB) imagery and co-registered LiDAR point clouds to classify urban vegetation and buildings from other urban classes/cover types. Structural, as well as spectral features, were used in the classification method. These features included height, flatness, and the distribution of normal surface vectors from LiDAR data, along with a non-calibrated LiDAR-based vegetation index, derived from combining LiDAR intensity at 1064 nm with the red channel of the RGB imagery. This novel index was dubbed the LiDAR-infused difference vegetation index (LDVI). Classification results indicated good separation between buildings and vegetation, with an overall accuracy of 92% and a kappa statistic of 0.85. A multi-tiered delineation algorithm subsequently was developed to extract individual tree crowns from the identified tree clusters, followed by the application of species-independent biomass models based on LiDAR-derived tree attributes in regression analysis. These LiDAR-based biomass assessments were conducted for individual trees, as well as for clusters of trees, in cases where proper delineation of individual trees was impossible. The detection accuracy of the tree delineation algorithm was 70%. The LiDAR-derived biomass estimates were validated against allometry-based biomass estimates that were computed from field-measured tree data. It was found out that LiDAR-derived tree volume, area, and different distribution parameters of height (e.g., maximum height, mean of height) are important to model biomass. The best biomass model for the tree clusters and the individual trees showed an adjusted R-Squared value of 0.93 and 0.58, respectively. The results of this study showed that the developed fusion-based classification approach using LiDAR and aerial color (RGB) imagery is capable of producing good object detection accuracy. It was concluded that the LDVI can be used in vegetation detection and can act as a substitute for the normalized difference vegetation index (NDVI), when near-infrared multiband imagery is not available. Furthermore, the utility of LiDAR for characterizing the urban forest and associated biomass was proven. This work could have significant impact on the rapid and accurate assessment of urban green spaces and associated carbon monitoring and management

Individual Tree Crown Delineation Using Multispectral LiDAR Data

In this study, an improved treetop detection and a region-based segmentation algorithm were developed to delineate Individual Tree Crowns (ITCs) using multispectral Light Detection and Ranging (LiDAR) data. The dataset used for this research was acquired from Teledyne Optechs Titan LiDAR sensor which was operated at three wavelengths: 1550 nm, 1064 nm, and 532 nm. An improved multi-scale method was developed to identify treetops for different crown sizes and merge them via Gaussian fitting. With the improved region growing segmentation method, neutrosophic logic was extensively used to incorporate contextual intensity information in the region merging decision heuristics. The LiDAR positional data was uniquely exploited, in this research, to generate refine crown boundary approximations. The results from the proposed method were compared with manually delineated ITCs to highlight the performance improvements. A 12% increase in the accuracy was observed with the proposed method over the popular Marker Controlled Watershed segmentation technique

Ash Tree Identification Based on the Integration of Hyperspectral Imagery and High-density Lidar Data

Monitoring and management of ash trees has become particularly important in recent years due to the heightened risk of attack from the invasive pest, the emerald ash borer (EAB). However, distinguishing ash from other deciduous trees can be challenging. Both hyperspectral imagery and Light detection and ranging (LiDAR) data are two valuable data sources that are often used for tree species classification. Hyperspectral imagery measures detailed spectral reflectance related to the biochemical properties of vegetation, while LiDAR data measures the three-dimensional structure of tree crowns related to morphological characteristics. Thus, the accuracy of vegetation classification may be improved by combining both techniques. Therefore, the objective of this research is to integrate hyperspectral imagery and LiDAR data for improving ash tree identification. Specifically, the research aims include: 1) using LiDAR data for individual tree crowns segmentation; 2) using hyperspectral imagery for extraction of relative pure crown spectra; 3) fusing hyperspectral and LiDAR data for ash tree identification. It is expected that the classification accuracy of ash trees will be significantly improved with the integration of hyperspectral and LiDAR techniques. Analysis results suggest that, first, 3D crown structures of individual trees can be reconstructed using a set of generalized geometric models which optimally matched LiDAR-derived raster image, and crown widths can be further estimated using tree height and shape-related parameters as independent variables and ground measurement of crown widths as dependent variables. Second, with constrained linear spectral mixture analysis method, the fractions of all materials within a pixel can be extracted, and relative pure crown-scale spectra can be further calculated using illuminated-leaf fraction as weighting factors for tree species classification. Third, both crown shape index (SI) and coefficient of variation (CV) can be extracted from LiDAR data as invariant variables in tree’s life cycle, and improve ash tree identification by integrating with pixel-weighted crown spectra. Therefore, three major contributions of this research have been made in the field of tree species classification:1) the automatic estimation of individual tree crown width from LiDAR data by combining a generalized geometric model and a regression model, 2) the computation of relative pure crown-scale spectral reflectance using a pixel-weighting algorithm for tree species classification, 3) the fusion of shape-related structural features and pixel-weighted crown-scale spectral features for improving of ash tree identification

A Density-Based Algorithm for the Detection of Individual Trees from LiDAR Data

Nowadays, LiDAR is widely used for individual tree detection, usually providing higher accuracy in coniferous stands than in deciduous ones, where the rounded-crown, the presence of understory vegetation, and the random spatial tree distribution may affect the identification algorithms. In this work, we propose a novel algorithm that aims to overcome these difficulties and yield the coordinates and the height of the individual trees on the basis of the point density features of the input point cloud. The algorithm was tested on twelve deciduous areas, assessing its performance on both regular-patterned plantations and stands with randomly distributed trees. For all cases, the algorithm provides high accuracy tree count (F-score > 0.7) and satisfying stem locations (position error around 1.0 m). In comparison to other common tools, the algorithm is weakly sensitive to the parameter setup and can be applied with little knowledge of the study site, thus reducing the effort and cost of field campaigns. Furthermore, it demonstrates to require just 2 points·m^−2 as minimum point density, allowing for the analysis of low-density point clouds. Despite its simplicity, it may set the basis for more complex tools, such as those for crown segmentation or biomass computation, with potential applications in forest modeling and management

FOREST PARAMETER ESTIMATION FROM AIRBORNE LIDAR DATA IN RUGGED MOUNTAINOUS AREAS

Environmental Science and EngineeringDuring the past decade, the procedure for quantification of forest parameters using LiDAR data has been rapidly improved. Among various forest parameters, biomass is the paramount in understanding the potentials productivity of forests. Various methods have been developed to estimate biomass at both plot and individual tree levels. In order to quantify biomass at the individual tree level, tree crown delineation must be conducted, which is sometimes challenging especially for multi-layer dense forests in rugged mountainous areas. In this study, Light Detection and Ranging (LiDAR) data were used to delineate tree crowns and estimate biomass in a mountainous forest. Firstly, a novel algorithm was proposed to identify individual tree crowns using the concept of live crown ratios based solely on LiDAR data. Then, above ground biomass (AGB) was estimated using machine learning approaches based on tree crowns delineated in the previous step. LiDAR-derived metrics related to forest parameters such as tree height and crown areas as well as topographic characteristics extracted based on the delineated tree crowns were used to estimate AGB. Three machine learning models— random forest, Cubist, and support vector regression—were evaluated for AGB estimation and relative importance of input variables was examined.ope

A Multispectral Data Model for Higher-Order Active Contours and its Application to Tree Crown Extraction

Forestry management makes great use of statistics concerning the individual trees making up a forest, but the acquisition of this information is expensive. Image processing can potentially both reduce this cost and improve the statistics. The key problem is the delineation of tree crowns in aerial images. The automatic solution of this problem requires considerable prior information to be built into the image and region models. Our previous work has focused on including shape information in the region model; in this paper we examine the image model. The aerial images involved have three bands. We study the statistics of these bands, and construct both multispectral and single band image models. We combine these with a higher-order active contour model of a `gas of circles' in order to include prior shape information about the region occupied by the tree crowns in the image domain. We compare the results produced by these models on real aerial images and conclude that multiple bands improves the quality of the segmentation. The model has many other potential applications, e.g. to nano-technology, microbiology, physics, and medical imaging

SINGLE TREE DELINEATION USING AIRBORNE LIDAR DATA

In this paper, single tree extraction was carried out using the first and last pulse airborne LIght Detection And Ranging (LIDAR) data. The LIDAR data was collected from TopoSys in May 2007 in the Milicz forest district, Poland, with a density of 7 points m-2. The total study area contains 25 circular plots of different radius according to the age of the trees. The absolute height of each point was obtained by normalizing the LIDAR raw data points using a digital terrain model (DTM) of the area. The value of σ used while smoothing was found higher for the deciduous tree dominating plots as compared to the coniferous plots. A modified k-means clustering algorithm was applied to extract the clusters of single tree above 4m height in each plot from the normalized LIDAR point clouds. 3-D convex polytope reconstruction from the extracted clusters of each tree was carried out using QHull algorithm. The validated result shows that an average of nearly 86% of the matured deciduous and 93% of the matured coniferous trees were extracted by the presented approach. Almost equal average accuracies were obtained in the case of young deciduous and coniferous tree species (58%). It seems that the algorithm did not work well with relatively younger tree types even after varying the parameters at pre-processing steps. The study showed that the adjustment of certain parameters like threshold distance, smoothing factor and scaling factor for the height before initialising the main process, has a substantial impact on the number and shape of the trees to be extracted more appropriately by applying the modified k-means procedure. There is a future scope of improving and testing the algorithm with different density of LIDAR data in different forest conditions

Derivation of forest inventory parameters from high-resolution satellite imagery for the Thunkel area, Northern Mongolia. A comparative study on various satellite sensors and data analysis techniques.

With the demise of the Soviet Union and the transition to a market economy starting in the 1990s, Mongolia has been experiencing dramatic changes resulting in social and economic disparities and an increasing strain on its natural resources. The situation is exacerbated by a changing climate, the erosion of forestry related administrative structures, and a lack of law enforcement activities. Mongolia’s forests have been afflicted with a dramatic increase in degradation due to human and natural impacts such as overexploitation and wildfire occurrences. In addition, forest management practices are far from being sustainable. In order to provide useful information on how to viably and effectively utilise the forest resources in the future, the gathering and analysis of forest related data is pivotal. Although a National Forest Inventory was conducted in 2016, very little reliable and scientifically substantiated information exists related to a regional or even local level. This lack of detailed information warranted a study performed in the Thunkel taiga area in 2017 in cooperation with the GIZ. In this context, we hypothesise that (i) tree species and composition can be identified utilising the aerial imagery, (ii) tree height can be extracted from the resulting canopy height model with accuracies commensurate with field survey measurements, and (iii) high-resolution satellite imagery is suitable for the extraction of tree species, the number of trees, and the upscaling of timber volume and basal area based on the spectral properties. The outcomes of this study illustrate quite clearly the potential of employing UAV imagery for tree height extraction (R2 of 0.9) as well as for species and crown diameter determination. However, in a few instances, the visual interpretation of the aerial photographs were determined to be superior to the computer-aided automatic extraction of forest attributes. In addition, imagery from various satellite sensors (e.g. Sentinel-2, RapidEye, WorldView-2) proved to be excellently suited for the delineation of burned areas and the assessment of tree vigour. Furthermore, recently developed sophisticated classifying approaches such as Support Vector Machines and Random Forest appear to be tailored for tree species discrimination (Overall Accuracy of 89%). Object-based classification approaches convey the impression to be highly suitable for very high-resolution imagery, however, at medium scale, pixel-based classifiers outperformed the former. It is also suggested that high radiometric resolution bears the potential to easily compensate for the lack of spatial detectability in the imagery. Quite surprising was the occurrence of dark taiga species in the riparian areas being beyond their natural habitat range. The presented results matrix and the interpretation key have been devised as a decision tool and/or a vademecum for practitioners. In consideration of future projects and to facilitate the improvement of the forest inventory database, the establishment of permanent sampling plots in the Mongolian taigas is strongly advised.2021-06-0