Contributions to Ensemble Classifiers with Image Analysis Applications

134 p.Ésta tesis tiene dos aspectos fundamentales, por un lado, la propuesta denuevas arquitecturas de clasificadores y, por otro, su aplicación a el análisis deimagen.Desde el punto de vista de proponer nuevas arquitecturas de clasificaciónla tesis tiene dos contribucciones principales. En primer lugar la propuestade un innovador ensemble de clasificadores basado en arquitecturas aleatorias,como pueden ser las Extreme Learning Machines (ELM), Random Forest (RF) yRotation Forest, llamado Hybrid Extreme Rotation Forest (HERF) y su mejoraAnticipative HERF (AHERF) que conlleva una selección del modelo basada enel rendimiento de predicción para cada conjunto de datos específico. Ademásde lo anterior, proveemos una prueba formal tanto del AHERF, como de laconvergencia de los ensembles de regresores ELMs que mejoran la usabilidad yreproducibilidad de los resultados.En la vertiente de aplicación hemos estado trabajando con dos tipos de imágenes:imágenes hiperespectrales de remote sensing, e imágenes médicas tanto depatologías específicas de venas de sangre como de imágenes para el diagnósticode Alzheimer. En todos los casos los ensembles de clasificadores han sido la herramientacomún además de estrategias especificas de aprendizaje activo basadasen dichos ensembles de clasificadores. En el caso concreto de la segmentaciónde vasos sanguíneos nos hemos enfrentado con problemas, uno relacionado conlos trombos del Aneurismas de Aorta Abdominal en imágenes 3D de tomografíacomputerizada y el otro la segmentación de venas sangineas en la retina. Losresultados en ambos casos en términos de rendimiento en clasificación y ahorrode tiempo en la segmentación humana nos permiten recomendar esos enfoquespara la práctica clínica.Chapter 1Background y contribuccionesDado el espacio limitado para realizar el resumen de la tesis hemos decididoincluir un resumen general con los puntos más importantes, una pequeña introducciónque pudiera servir como background para entender los conceptos básicosde cada uno de los temas que hemos tocado y un listado con las contribuccionesmás importantes.1.1 Ensembles de clasificadoresLa idea de los ensembles de clasificadores fue propuesta por Hansen y Salamon[4] en el contexto del aprendizaje de las redes neuronales artificiales. Sutrabajo mostró que un ensemble de redes neuronales con un esquema de consensogrupal podía mejorar el resultado obtenido con una única red neuronal.Los ensembles de clasificadores buscan obtener unos resultados de clasificaciónmejores combinando clasificadores débiles y diversos [8, 9]. La propuesta inicialde ensemble contenía una colección homogena de clasificadores individuales. ElRandom Forest es un claro ejemplo de ello, puesto que combina la salida de unacolección de árboles de decisión realizando una votación por mayoría [2, 3], yse construye utilizando una técnica de remuestreo sobre el conjunto de datos ycon selección aleatoria de variables.2CHAPTER 1. BACKGROUND Y CONTRIBUCCIONES 31.2 Aprendizaje activoLa construcción de un clasificador supervisado consiste en el aprendizaje de unaasignación de funciones de datos en un conjunto de clases dado un conjunto deentrenamiento etiquetado. En muchas situaciones de la vida real la obtenciónde las etiquetas del conjunto de entrenamiento es costosa, lenta y propensa aerrores. Esto hace que la construcción del conjunto de entrenamiento sea unatarea engorrosa y requiera un análisis manual exaustivo de la imagen. Esto se realizanormalmente mediante una inspección visual de las imágenes y realizandoun etiquetado píxel a píxel. En consecuencia el conjunto de entrenamiento esaltamente redundante y hace que la fase de entrenamiento del modelo sea muylenta. Además los píxeles ruidosos pueden interferir en las estadísticas de cadaclase lo que puede dar lugar a errores de clasificación y/o overfitting. Por tantoes deseable que un conjunto de entrenamiento sea construido de una manera inteligente,lo que significa que debe representar correctamente los límites de clasemediante el muestreo de píxeles discriminantes. La generalización es la habilidadde etiquetar correctamente datos que no se han visto previamente y quepor tanto son nuevos para el modelo. El aprendizaje activo intenta aprovecharla interacción con un usuario para proporcionar las etiquetas de las muestrasdel conjunto de entrenamiento con el objetivo de obtener la clasificación másprecisa utilizando el conjunto de entrenamiento más pequeño posible.1.3 AlzheimerLa enfermedad de Alzheimer es una de las causas más importantes de discapacidaden personas mayores. Dado el envejecimiento poblacional que es una realidaden muchos países, con el aumento de la esperanza de vida y con el aumentodel número de personas mayores, el número de pacientes con demencia aumentarátambién. Debido a la importancia socioeconómica de la enfermedad enlos países occidentales existe un fuerte esfuerzo internacional focalizado en laenfermedad del Alzheimer. En las etapas tempranas de la enfermedad la atrofiacerebral suele ser sutil y está espacialmente distribuida por diferentes regionescerebrales que incluyen la corteza entorrinal, el hipocampo, las estructuras temporaleslateral e inferior, así como el cíngulo anterior y posterior. Son muchoslos esfuerzos de diseño de algoritmos computacionales tratando de encontrarbiomarcadores de imagen que puedan ser utilizados para el diagnóstico no invasivodel Alzheimer y otras enfermedades neurodegenerativas.CHAPTER 1. BACKGROUND Y CONTRIBUCCIONES 41.4 Segmentación de vasos sanguíneosLa segmentación de los vasos sanguíneos [1, 7, 6] es una de las herramientas computacionalesesenciales para la evaluación clínica de las enfermedades vasculares.Consiste en particionar un angiograma en dos regiones que no se superponen:la región vasculares y el fondo. Basándonos en los resultados de dicha particiónse pueden extraer, modelar, manipular, medir y visualizar las superficies vasculares.Éstas estructuras son muy útiles y juegan un rol muy imporntate en lostratamientos endovasculares de las enfermedades vasculares. Las enfermedadesvasculares son una de las principales fuentes de morbilidad y mortalidad en todoel mundo.Aneurisma de Aorta Abdominal El Aneurisma de Aorta Abdominal (AAA)es una dilatación local de la Aorta que ocurre entre las arterias renal e ilíaca. Eldebilitamiento de la pared de la aorta conduce a su deformación y la generaciónde un trombo. Generalmente, un AAA se diagnostica cuando el diámetro anterioposteriormínimo de la aorta alcanza los 3 centímetros [5]. La mayoría delos aneurismas aórticos son asintomáticos y sin complicaciones. Los aneurismasque causan los síntomas tienen un mayor riesgo de ruptura. El dolor abdominalo el dolor de espalda son las dos principales características clínicas que sugiereno bien la reciente expansión o fugas. Las complicaciones son a menudo cuestiónde vida o muerte y pueden ocurrir en un corto espacio de tiempo. Por lo tanto,el reto consiste en diagnosticar lo antes posible la aparición de los síntomas.Imágenes de Retina La evaluación de imágenes del fondo del ojo es una herramientade diagnóstico de la patología vascular y no vascular. Dicha inspecciónpuede revelar hipertensión, diabetes, arteriosclerosis, enfermedades cardiovascularese ictus. Los principales retos para la segmentación de vasos retinianos son:(1) la presencia de lesiones que se pueden interpretar de forma errónea comovasos sanguíneos; (2) bajo contraste alrededor de los vasos más delgados, (3)múltiples escalas de tamaño de los vasos.1.5 ContribucionesÉsta tesis tiene dos tipos de contribuciones. Contribuciones computacionales ycontribuciones orientadas a una aplicación o prácticas.CHAPTER 1. BACKGROUND Y CONTRIBUCCIONES 5Desde un punto de vista computacional las contribuciones han sido las siguientes:¿ Un nuevo esquema de aprendizaje activo usando Random Forest y el cálculode la incertidumbre que permite una segmentación de imágenes rápida,precisa e interactiva.¿ Hybrid Extreme Rotation Forest.¿ Adaptative Hybrid Extreme Rotation Forest.¿ Métodos de aprendizaje semisupervisados espectrales-espaciales.¿ Unmixing no lineal y reconstrucción utilizando ensembles de regresoresELM.Desde un punto de vista práctico:¿ Imágenes médicas¿ Aprendizaje activo combinado con HERF para la segmentación deimágenes de tomografía computerizada.¿ Mejorar el aprendizaje activo para segmentación de imágenes de tomografíacomputerizada con información de dominio.¿ Aprendizaje activo con el clasificador bootstrapped dendritic aplicadoa segmentación de imágenes médicas.¿ Meta-ensembles de clasificadores para detección de Alzheimer conimágenes de resonancia magnética.¿ Random Forest combinado con aprendizaje activo para segmentaciónde imágenes de retina.¿ Segmentación automática de grasa subcutanea y visceral utilizandoresonancia magnética.¿ Imágenes hiperespectrales¿ Unmixing no lineal y reconstrucción utilizando ensembles de regresoresELM.¿ Métodos de aprendizaje semisupervisados espectrales-espaciales concorrección espacial usando AHERF.¿ Método semisupervisado de clasificación utilizando ensembles de ELMsy con regularización espacial

Statistical Modelling

The book collects the proceedings of the 19th International Workshop on Statistical Modelling held in Florence on July 2004. Statistical modelling is an important cornerstone in many scientific disciplines, and the workshop has provided a rich environment for cross-fertilization of ideas from different disciplines. It consists in four invited lectures, 48 contributed papers and 47 posters. The contributions are arranged in sessions: Statistical Modelling; Statistical Modelling in Genomics; Semi-parametric Regression Models; Generalized Linear Mixed Models; Correlated Data Modelling; Missing Data, Measurement of Error and Survival Analysis; Spatial Data Modelling and Time Series and Econometrics

Pattern Recognition

Pattern recognition is a very wide research field. It involves factors as diverse as sensors, feature extraction, pattern classification, decision fusion, applications and others. The signals processed are commonly one, two or three dimensional, the processing is done in real- time or takes hours and days, some systems look for one narrow object class, others search huge databases for entries with at least a small amount of similarity. No single person can claim expertise across the whole field, which develops rapidly, updates its paradigms and comprehends several philosophical approaches. This book reflects this diversity by presenting a selection of recent developments within the area of pattern recognition and related fields. It covers theoretical advances in classification and feature extraction as well as application-oriented works. Authors of these 25 works present and advocate recent achievements of their research related to the field of pattern recognition

Neuroengineering of Clustering Algorithms

Cluster analysis can be broadly divided into multivariate data visualization, clustering algorithms, and cluster validation. This dissertation contributes neural network-based techniques to perform all three unsupervised learning tasks. Particularly, the first paper provides a comprehensive review on adaptive resonance theory (ART) models for engineering applications and provides context for the four subsequent papers. These papers are devoted to enhancements of ART-based clustering algorithms from (a) a practical perspective by exploiting the visual assessment of cluster tendency (VAT) sorting algorithm as a preprocessor for ART offline training, thus mitigating ordering effects; and (b) an engineering perspective by designing a family of multi-criteria ART models: dual vigilance fuzzy ART and distributed dual vigilance fuzzy ART (both of which are capable of detecting complex cluster structures), merge ART (aggregates partitions and lessens ordering effects in online learning), and cluster validity index vigilance in fuzzy ART (features a robust vigilance parameter selection and alleviates ordering effects in offline learning). The sixth paper consists of enhancements to data visualization using self-organizing maps (SOMs) by depicting in the reduced dimension and topology-preserving SOM grid information-theoretic similarity measures between neighboring neurons. This visualization\u27s parameters are estimated using samples selected via a single-linkage procedure, thereby generating heatmaps that portray more homogeneous within-cluster similarities and crisper between-cluster boundaries. The seventh paper presents incremental cluster validity indices (iCVIs) realized by (a) incorporating existing formulations of online computations for clusters\u27 descriptors, or (b) modifying an existing ART-based model and incrementally updating local density counts between prototypes. Moreover, this last paper provides the first comprehensive comparison of iCVIs in the computational intelligence literature --Abstract, page iv

SIS 2017. Statistics and Data Science: new challenges, new generations

The 2017 SIS Conference aims to highlight the crucial role of the Statistics in Data Science. In this new domain of ‘meaning’ extracted from the data, the increasing amount of produced and available data in databases, nowadays, has brought new challenges. That involves different fields of statistics, machine learning, information and computer science, optimization, pattern recognition. These afford together a considerable contribute in the analysis of ‘Big data’, open data, relational and complex data, structured and no-structured. The interest is to collect the contributes which provide from the different domains of Statistics, in the high dimensional data quality validation, sampling extraction, dimensional reduction, pattern selection, data modelling, testing hypotheses and confirming conclusions drawn from the data

MATLAB

A well-known statement says that the PID controller is the "bread and butter" of the control engineer. This is indeed true, from a scientific standpoint. However, nowadays, in the era of computer science, when the paper and pencil have been replaced by the keyboard and the display of computers, one may equally say that MATLAB is the "bread" in the above statement. MATLAB has became a de facto tool for the modern system engineer. This book is written for both engineering students, as well as for practicing engineers. The wide range of applications in which MATLAB is the working framework, shows that it is a powerful, comprehensive and easy-to-use environment for performing technical computations. The book includes various excellent applications in which MATLAB is employed: from pure algebraic computations to data acquisition in real-life experiments, from control strategies to image processing algorithms, from graphical user interface design for educational purposes to Simulink embedded systems

Innovative Methods and Materials in Structural Health Monitoring of Civil Infrastructures

In the past, when elements in sructures were composed of perishable materials, such as wood, the maintenance of houses, bridges, etc., was considered of vital importance for their safe use and to preserve their efficiency. With the advent of materials such as reinforced concrete and steel, given their relatively long useful life, periodic and constant maintenance has often been considered a secondary concern. When it was realized that even for structures fabricated with these materials that the useful life has an end and that it was being approached, planning maintenance became an important and non-negligible aspect. Thus, the concept of structural health monitoring (SHM) was introduced, designed, and implemented as a multidisciplinary method. Computational mechanics, static and dynamic analysis of structures, electronics, sensors, and, recently, the Internet of Things (IoT) and artificial intelligence (AI) are required, but it is also important to consider new materials, especially those with intrinsic self-diagnosis characteristics, and to use measurement and survey methods typical of modern geomatics, such as satellite surveys and highly sophisticated laser tools

Combining SOA and BPM Technologies for Cross-System Process Automation

This paper summarizes the results of an industry case study that introduced a cross-system business process automation solution based on a combination of SOA and BPM standard technologies (i.e., BPMN, BPEL, WSDL). Besides discussing major weaknesses of the existing, custom-built, solution and comparing them against experiences with the developed prototype, the paper presents a course of action for transforming the current solution into the proposed solution. This includes a general approach, consisting of four distinct steps, as well as specific action items that are to be performed for every step. The discussion also covers language and tool support and challenges arising from the transformation

BEYOND MULTI-TARGET TRACKING: STATISTICAL PATTERN ANALYSIS OF PEOPLE AND GROUPS

Ogni giorno milioni e milioni di videocamere monitorano la vita quotidiana delle persone, registrando e collezionando una grande quantit\ue0 di dati. Questi dati possono essere molto utili per scopi di video-sorveglianza: dalla rilevazione di comportamenti anomali all'analisi del traffico urbano nelle strade. Tuttavia i dati collezionati vengono usati raramente, in quanto non \ue8 pensabile che un operatore umano riesca a esaminare manualmente e prestare attenzione a una tale quantit\ue0 di dati simultaneamente. Per questo motivo, negli ultimi anni si \ue8 verificato un incremento della richiesta di strumenti per l'analisi automatica di dati acquisiti da sistemi di video-sorveglianza in modo da estrarre informazione di pi\uf9 alto livello (per esempio, John, Sam e Anne stanno camminando in gruppo al parco giochi vicino alla stazione) a partire dai dati a disposizione che sono solitamente a basso livello e ridondati (per esempio, una sequenza di immagini). L'obiettivo principale di questa tesi \ue8 quello di proporre soluzioni e algoritmi automatici che permettono di estrarre informazione ad alto livello da una zona di interesse che viene monitorata da telecamere. Cos\uec i dati sono rappresentati in modo da essere facilmente interpretabili e analizzabili da qualsiasi persona. In particolare, questo lavoro \ue8 focalizzato sull'analisi di persone e i loro comportamenti sociali collettivi. Il titolo della tesi, beyond multi-target tracking, evidenzia lo scopo del lavoro: tutti i metodi proposti in questa tesi che si andranno ad analizzare hanno come comune denominatore il target tracking. Inoltre andremo oltre le tecniche standard per arrivare a una rappresentazione del dato a pi\uf9 alto livello. Per prima cosa, analizzeremo il problema del target tracking in quanto \ue8 alle basi di questo lavoro. In pratica, target tracking significa stimare la posizione di ogni oggetto di interesse in un immagine e la sua traiettoria nel tempo. Analizzeremo il problema da due prospettive complementari: 1) il punto di vista ingegneristico, dove l'obiettivo \ue8 quello di creare algoritmi che ottengono i risultati migliori per il problema in esame. 2) Il punto di vista della neuroscienza: motivati dalle teorie che cercano di spiegare il funzionamento del sistema percettivo umano, proporremo in modello attenzionale per tracking e il riconoscimento di oggetti e persone. Il secondo problema che andremo a esplorare sar\ue0 l'estensione del tracking alla situazione dove pi\uf9 telecamere sono disponibili. L'obiettivo \ue8 quello di mantenere un identificatore univoco per ogni persona nell'intera rete di telecamere. In altre parole, si vuole riconoscere gli individui che vengono monitorati in posizioni e telecamere diverse considerando un database di candidati. Tale problema \ue8 chiamato in letteratura re-indetificazione di persone. In questa tesi, proporremo un modello standard di come affrontare il problema. In questo modello, presenteremo dei nuovi descrittori di aspetto degli individui, in quanto giocano un ruolo importante allo scopo di ottenere i risultati migliori. Infine raggiungeremo il livello pi\uf9 alto di rappresentazione dei dati che viene affrontato in questa tesi, che \ue8 l'analisi di interazioni sociali tra persone. In particolare, ci focalizzeremo in un tipo specifico di interazione: il raggruppamento di persone. Proporremo dei metodi di visione computazionale che sfruttano nozioni di psicologia sociale per rilevare gruppi di persone. Inoltre, analizzeremo due modelli probabilistici che affrontano il problema di tracking (congiunto) di gruppi e individui.Every day millions and millions of surveillance cameras monitor the world, recording and collecting huge amount of data. The collected data can be extremely useful: from the behavior analysis to prevent unpleasant events, to the analysis of the traffic. However, these valuable data is seldom used, because of the amount of information that the human operator has to manually attend and examine. It would be like looking for a needle in the haystack. The automatic analysis of data is becoming mandatory for extracting summarized high-level information (e.g., John, Sam and Anne are walking together in group at the playground near the station) from the available redundant low-level data (e.g., an image sequence). The main goal of this thesis is to propose solutions and automatic algorithms that perform high-level analysis of a camera-monitored environment. In this way, the data are summarized in a high-level representation for a better understanding. In particular, this work is focused on the analysis of moving people and their collective behaviors. The title of the thesis, beyond multi-target tracking, mirrors the purpose of the work: we will propose methods that have the target tracking as common denominator, and go beyond the standard techniques in order to provide a high-level description of the data. First, we investigate the target tracking problem as it is the basis of all the next work. Target tracking estimates the position of each target in the image and its trajectory over time. We analyze the problem from two complementary perspectives: 1) the engineering point of view, where we deal with problem in order to obtain the best results in terms of accuracy and performance. 2) The neuroscience point of view, where we propose an attentional model for tracking and recognition of objects and people, motivated by theories of the human perceptual system. Second, target tracking is extended to the camera network case, where the goal is to keep a unique identifier for each person in the whole network, i.e., to perform person re-identification. The goal is to recognize individuals in diverse locations over different non-overlapping camera views or also the same camera, considering a large set of candidates. In this context, we propose a pipeline and appearance-based descriptors that enable us to define in a proper way the problem and to reach the-state-of-the-art results. Finally, the higher level of description investigated in this thesis is the analysis (discovery and tracking) of social interaction between people. In particular, we focus on finding small groups of people. We introduce methods that embed notions of social psychology into computer vision algorithms. Then, we extend the detection of social interaction over time, proposing novel probabilistic models that deal with (joint) individual-group tracking