GeNN: a code generation framework for accelerated brain simulations

Large-scale numerical simulations of detailed brain circuit models are important for identifying hypotheses on brain functions and testing their consistency and plausibility. An ongoing challenge for simulating realistic models is, however, computational speed. In this paper, we present the GeNN (GPU-enhanced Neuronal Networks) framework, which aims to facilitate the use of graphics accelerators for computational models of large-scale neuronal networks to address this challenge. GeNN is an open source library that generates code to accelerate the execution of network simulations on NVIDIA GPUs, through a flexible and extensible interface, which does not require in-depth technical knowledge from the users. We present performance benchmarks showing that 200-fold speedup compared to a single core of a CPU can be achieved for a network of one million conductance based Hodgkin-Huxley neurons but that for other models the speedup can differ. GeNN is available for Linux, Mac OS X and Windows platforms. The source code, user manual, tutorials, Wiki, in-depth example projects and all other related information can be found on the project website http://genn-team.github.io/genn/

Transport poverty meets the digital divide : accessibility and connectivity in rural communities

Peer reviewedPublisher PD

SPIDER: Fault Resilient SDN Pipeline with Recovery Delay Guarantees

When dealing with node or link failures in Software Defined Networking (SDN), the network capability to establish an alternative path depends on controller reachability and on the round trip times (RTTs) between controller and involved switches. Moreover, current SDN data plane abstractions for failure detection (e.g. OpenFlow "Fast-failover") do not allow programmers to tweak switches' detection mechanism, thus leaving SDN operators still relying on proprietary management interfaces (when available) to achieve guaranteed detection and recovery delays. We propose SPIDER, an OpenFlow-like pipeline design that provides i) a detection mechanism based on switches' periodic link probing and ii) fast reroute of traffic flows even in case of distant failures, regardless of controller availability. SPIDER can be implemented using stateful data plane abstractions such as OpenState or Open vSwitch, and it offers guaranteed short (i.e. ms) failure detection and recovery delays, with a configurable trade off between overhead and failover responsiveness. We present here the SPIDER pipeline design, behavioral model, and analysis on flow tables' memory impact. We also implemented and experimentally validated SPIDER using OpenState (an OpenFlow 1.3 extension for stateful packet processing), showing numerical results on its performance in terms of recovery latency and packet losses.Comment: 8 page

Balancing Global Exploration and Local-connectivity Exploitation with Rapidly-exploring Random disjointed-Trees

Sampling efficiency in a highly constrained environment has long been a major challenge for sampling-based planners. In this work, we propose Rapidly-exploring Random disjointed-Trees* (RRdT*), an incremental optimal multi-query planner. RRdT* uses multiple disjointed-trees to exploit local-connectivity of spaces via Markov Chain random sampling, which utilises neighbourhood information derived from previous successful and failed samples. To balance local exploitation, RRdT* actively explore unseen global spaces when local-connectivity exploitation is unsuccessful. The active trade-off between local exploitation and global exploration is formulated as a multi-armed bandit problem. We argue that the active balancing of global exploration and local exploitation is the key to improving sample efficient in sampling-based motion planners. We provide rigorous proofs of completeness and optimal convergence for this novel approach. Furthermore, we demonstrate experimentally the effectiveness of RRdT*'s locally exploring trees in granting improved visibility for planning. Consequently, RRdT* outperforms existing state-of-the-art incremental planners, especially in highly constrained environments.Comment: Submitted to IEEE International Conference on Robotics and Automation (ICRA) 201