21,979 research outputs found

    Coupling of cytoplasm and adhesion dynamics determines cell polarization and locomotion

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    Observations of single epidermal cells on flat adhesive substrates have revealed two distinct morphological and functional states, namely a non-migrating symmetric unpolarized state and a migrating asymmetric polarized state. These states are characterized by different spatial distributions and dynamics of important biochemical cell components: F-actin and myosin-II form the contractile part of the cytoskeleton, and integrin receptors in the plasma membrane connect F-actin filaments to the substratum. In this way, focal adhesion complexes are assembled, which determine cytoskeletal force transduction and subsequent cell locomotion. So far, physical models have reduced this phenomenon either to gradients in regulatory control molecules or to different mechanics of the actin filament system in different regions of the cell. Here we offer an alternative and self-organizational model incorporating polymerization, pushing and sliding of filaments, as well as formation of adhesion sites and their force dependent kinetics. All these phenomena can be combined into a non-linearly coupled system of hyperbolic, parabolic and elliptic differential equations. Aim of this article is to show how relatively simple relations for the small-scale mechanics and kinetics of participating molecules may reproduce the emergent behavior of polarization and migration on the large-scale cell level.Comment: v2 (updates from proof): add TOC, clarify Fig. 4, fix several typo

    The Watchdog Task: Concurrent error detection using assertions

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    The Watchdog Task, a software abstraction of the Watchdog-processor, is shown to be a powerful error detection tool with a great deal of flexibility and the advantages of watchdog techniques. A Watchdog Task system in Ada is presented; issues of recovery, latency, efficiency (communication) and preprocessing are discussed. Different applications, one of which is error detection on a single processor, are examined

    On merging the fields of neural networks and adaptive data structures to yield new pattern recognition methodologies

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    The aim of this talk is to explain a pioneering exploratory research endeavour that attempts to merge two completely different fields in Computer Science so as to yield very fascinating results. These are the well-established fields of Neural Networks (NNs) and Adaptive Data Structures (ADS) respectively. The field of NNs deals with the training and learning capabilities of a large number of neurons, each possessing minimal computational properties. On the other hand, the field of ADS concerns designing, implementing and analyzing data structures which adaptively change with time so as to optimize some access criteria. In this talk, we shall demonstrate how these fields can be merged, so that the neural elements are themselves linked together using a data structure. This structure can be a singly-linked or doubly-linked list, or even a Binary Search Tree (BST). While the results themselves are quite generic, in particular, we shall, as a prima facie case, present the results in which a Self-Organizing Map (SOM) with an underlying BST structure can be adaptively re-structured using conditional rotations. These rotations on the nodes of the tree are local and are performed in constant time, guaranteeing a decrease in the Weighted Path Length of the entire tree. As a result, the algorithm, referred to as the Tree-based Topology-Oriented SOM with Conditional Rotations (TTO-CONROT), converges in such a manner that the neurons are ultimately placed in the input space so as to represent its stochastic distribution. Besides, the neighborhood properties of the neurons suit the best BST that represents the data

    Trajectory generation for road vehicle obstacle avoidance using convex optimization

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    This paper presents a method for trajectory generation using convex optimization to find a feasible, obstacle-free path for a road vehicle. Consideration of vehicle rotation is shown to be necessary if the trajectory is to avoid obstacles specified in a fixed Earth axis system. The paper establishes that, despite the presence of significant non-linearities, it is possible to articulate the obstacle avoidance problem in a tractable convex form using multiple optimization passes. Finally, it is shown by simulation that an optimal trajectory that accounts for the vehicle’s changing velocity throughout the manoeuvre is superior to a previous analytical method that assumes constant speed

    In silico case studies of compliant robots: AMARSI deliverable 3.3

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    In the deliverable 3.2 we presented how the morphological computing ap- proach can significantly facilitate the control strategy in several scenarios, e.g. quadruped locomotion, bipedal locomotion and reaching. In particular, the Kitty experimental platform is an example of the use of morphological computation to allow quadruped locomotion. In this deliverable we continue with the simulation studies on the application of the different morphological computation strategies to control a robotic system

    Collective motion of cells: from experiments to models

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    Swarming or collective motion of living entities is one of the most common and spectacular manifestations of living systems having been extensively studied in recent years. A number of general principles have been established. The interactions at the level of cells are quite different from those among individual animals therefore the study of collective motion of cells is likely to reveal some specific important features which are overviewed in this paper. In addition to presenting the most appealing results from the quickly growing related literature we also deliver a critical discussion of the emerging picture and summarize our present understanding of collective motion at the cellular level. Collective motion of cells plays an essential role in a number of experimental and real-life situations. In most cases the coordinated motion is a helpful aspect of the given phenomenon and results in making a related process more efficient (e.g., embryogenesis or wound healing), while in the case of tumor cell invasion it appears to speed up the progression of the disease. In these mechanisms cells both have to be motile and adhere to one another, the adherence feature being the most specific to this sort of collective behavior. One of the central aims of this review is both presenting the related experimental observations and treating them in the light of a few basic computational models so as to make an interpretation of the phenomena at a quantitative level as well.Comment: 24 pages, 25 figures, 13 reference video link

    Urban and extra-urban hybrid vehicles: a technological review

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    Pollution derived from transportation systems is a worldwide, timelier issue than ever. The abatement actions of harmful substances in the air are on the agenda and they are necessary today to safeguard our welfare and that of the planet. Environmental pollution in large cities is approximately 20% due to the transportation system. In addition, private traffic contributes greatly to city pollution. Further, “vehicle operating life” is most often exceeded and vehicle emissions do not comply with European antipollution standards. It becomes mandatory to find a solution that respects the environment and, realize an appropriate transportation service to the customers. New technologies related to hybrid –electric engines are making great strides in reducing emissions, and the funds allocated by public authorities should be addressed. In addition, the use (implementation) of new technologies is also convenient from an economic point of view. In fact, by implementing the use of hybrid vehicles, fuel consumption can be reduced. The different hybrid configurations presented refer to such a series architecture, developed by the researchers and Research and Development groups. Regarding energy flows, different strategy logic or vehicle management units have been illustrated. Various configurations and vehicles were studied by simulating different driving cycles, both European approval and homologation and customer ones (typically municipal and university). The simulations have provided guidance on the optimal proposed configuration and information on the component to be used
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