Shallow Water Bathymetry Mapping from UAV Imagery based on Machine Learning

The determination of accurate bathymetric information is a key element for near offshore activities, hydrological studies such as coastal engineering applications, sedimentary processes, hydrographic surveying as well as archaeological mapping and biological research. UAV imagery processed with Structure from Motion (SfM) and Multi View Stereo (MVS) techniques can provide a low-cost alternative to established shallow seabed mapping techniques offering as well the important visual information. Nevertheless, water refraction poses significant challenges on depth determination. Till now, this problem has been addressed through customized image-based refraction correction algorithms or by modifying the collinearity equation. In this paper, in order to overcome the water refraction errors, we employ machine learning tools that are able to learn the systematic underestimation of the estimated depths. In the proposed approach, based on known depth observations from bathymetric LiDAR surveys, an SVR model was developed able to estimate more accurately the real depths of point clouds derived from SfM-MVS procedures. Experimental results over two test sites along with the performed quantitative validation indicated the high potential of the developed approach.Comment: 8 pages, 9 figure

High-Throughput System for the Early Quantification of Major Architectural Traits in Olive Breeding Trials Using UAV Images and OBIA Techniques

The need for the olive farm modernization have encouraged the research of more efficient crop management strategies through cross-breeding programs to release new olive cultivars more suitable for mechanization and use in intensive orchards, with high quality production and resistance to biotic and abiotic stresses. The advancement of breeding programs are hampered by the lack of efficient phenotyping methods to quickly and accurately acquire crop traits such as morphological attributes (tree vigor and vegetative growth habits), which are key to identify desirable genotypes as early as possible. In this context, an UAV-based high-throughput system for olive breeding program applications was developed to extract tree traits in large-scale phenotyping studies under field conditions. The system consisted of UAV-flight configurations, in terms of flight altitude and image overlaps, and a novel, automatic, and accurate object-based image analysis (OBIA) algorithm based on point clouds, which was evaluated in two experimental trials in the framework of a table olive breeding program, with the aim to determine the earliest date for suitable quantifying of tree architectural traits. Two training systems (intensive and hedgerow) were evaluated at two very early stages of tree growth: 15 and 27 months after planting. Digital Terrain Models (DTMs) were automatically and accurately generated by the algorithm as well as every olive tree identified, independently of the training system and tree age. The architectural traits, specially tree height and crown area, were estimated with high accuracy in the second flight campaign, i.e. 27 months after planting. Differences in the quality of 3D crown reconstruction were found for the growth patterns derived from each training system. These key phenotyping traits could be used in several olive breeding programs, as well as to address some agronomical goals. In addition, this system is cost and time optimized, so that requested architectural traits could be provided in the same day as UAV flights. This high-throughput system may solve the actual bottleneck of plant phenotyping of "linking genotype and phenotype," considered a major challenge for crop research in the 21st century, and bring forward the crucial time of decision making for breeders

A Comparative Analysis of Phytovolume Estimation Methods Based on UAV-Photogrammetry and Multispectral Imagery in a Mediterranean Forest

Management and control operations are crucial for preventing forest fires, especially in Mediterranean forest areas with dry climatic periods. One of them is prescribed fires, in which the biomass fuel present in the controlled plot area must be accurately estimated. The most used methods for estimating biomass are time-consuming and demand too much manpower. Unmanned aerial vehicles (UAVs) carrying multispectral sensors can be used to carry out accurate indirect measurements of terrain and vegetation morphology and their radiometric characteristics. Based on the UAV-photogrammetric project products, four estimators of phytovolume were compared in a Mediterranean forest area, all obtained using the difference between a digital surface model (DSM) and a digital terrain model (DTM). The DSM was derived from a UAV-photogrammetric project based on the structure from a motion algorithm. Four different methods for obtaining a DTM were used based on an unclassified dense point cloud produced through a UAV-photogrammetric project (FFU), an unsupervised classified dense point cloud (FFC), a multispectral vegetation index (FMI), and a cloth simulation filter (FCS). Qualitative and quantitative comparisons determined the ability of the phytovolume estimators for vegetation detection and occupied volume. The results show that there are no significant differences in surface vegetation detection between all the pairwise possible comparisons of the four estimators at a 95% confidence level, but FMI presented the best kappa value (0.678) in an error matrix analysis with reference data obtained from photointerpretation and supervised classification. Concerning the accuracy of phytovolume estimation, only FFU and FFC presented differences higher than two standard deviations in a pairwise comparison, and FMI presented the best RMSE (12.3 m) when the estimators were compared to 768 observed data points grouped in four 500 m2 sample plots. The FMI was the best phytovolume estimator of the four compared for low vegetation height in a Mediterranean forest. The use of FMI based on UAV data provides accurate phytovolume estimations that can be applied on several environment management activities, including wildfire prevention. Multitemporal phytovolume estimations based on FMI could help to model the forest resources evolution in a very realistic way

Yield prediction by machine learning from UAS‑based mulit‑sensor data fusion in soybean

16 p.Nowadays, automated phenotyping of plants is essential for precise and cost-effective improvement in the efficiency of crop genetics. In recent years, machine learning (ML) techniques have shown great success in the classification and modelling of crop parameters. In this research, we consider the capability of ML to perform grain yield prediction in soybeans by combining data from different optical sensors via RF (Random Forest) and XGBoost (eXtreme Gradient Boosting). During the 2018 growing season, a panel of 382 soybean recombinant inbred lines were evaluated in a yield trial at the Agronomy Center for Research and Education (ACRE) in West Lafayette (Indiana, USA). Images were acquired by the Parrot Sequoia Multispectral Sensor and the S.O.D.A. compact digital camera on board a senseFly eBee UAS (Unnamed Aircraft System) solution at R4 and early R5 growth stages. Next, a standard photogrammetric pipeline was carried out by SfM (Structure from Motion). Multispectral imagery serves to analyse the spectral response of the soybean end-member in 2D. In addition, RGB images were used to reconstruct the study area in 3D, evaluating the physiological growth dynamics per plot via height variations and crop volume estimations. As ground truth, destructive grain yield measurements were taken at the end of the growing season.SI"Development of Analytical Tools for Drone-based Canopy Phenotyping in Crop Breeding" (American Institute of Food and Agriculture

Measurement of soil tillage using uav high-resolution 3d data

PTDC/CTA-OHR/32360/2017 UIDB/04647/2020 UIDP/04647/2020Remote sensing methodologies could contribute to a more sustainable agriculture, such as monitoring soil preparation for cultivation, which should be done properly, according to the topographic characteristics and the crop’s nature. The objectives of this work are to (1) demonstrate the potential of unmanned aerial vehicle (UAV) technology in the acquisition of 3D data before and after soil tillage, for the quantification of mobilised soil volume; (2) propose a methodology that enables the co-registration of multi-temporal DTMs that were obtained from UAV surveys; and (3) show the relevance of quality control and positional accuracy assessment in processing and results. An unchanged-area-matching method based on multiple linear regression analysis was implemented to reduce the deviation between the Digital Terrain Models (DTMs) to calculate a more reliable mobilised soil volume. The production of DTMs followed the usual photogrammetric-based Structure from Motion (SfM) workflow; the extraction of fill and cut areas was made through raster spatial modelling and statistical tools to support the analysis. Results highlight that the quality of the differential DTM should be ensured for a reliable estimation of areas and mobilised soil volume. This study is a contribution to the use of multi-temporal DTMs produced from different UAV surveys. Furthermore, it demonstrates the potential of UAV data in the understanding of soil variability within precision agriculture.publishersversionpublishe

LINEAR REGRESSION AND LINES INTERSECTING AS A METHOD OF EXTRACTING PUNCTUAL ENTITIES IN A LIDAR POINT CLOUD

The characteristics of data points obtained by laser scanning (LiDAR) and images have been considered complementary in the field of photogrammetric applications, and research to improve their integrated use have recently intensified. This study aim to verify the performance of determining punctual entities in a LiDAR point cloud using linear regression and intersecting lines obtained from buildings with square rooftop containing four planes (hip roof), as well as compare punctual entities three-dimensional coordinates determined by planes intersection. Our results show that the proposed method was more accurate in determining three-dimensional coordinates than plan intersection method. The obtained coordinates were evaluated and framed into the map accuracy standard for digital cartographic products (PEC-PCD), besides being analyzed for trend and precision. Accuracy analysis results frame punctual entities three-dimensional coordinates into the 1/2,000 or lower scale for Class A of PEC-PCD

Bathymetric detection of fluvial environments through UASs and machine learning systems

In recent decades, photogrammetric and machine learning technologies have become essential for a better understanding of environmental and anthropic issues. The present work aims to respond one of the most topical problems in environmental photogrammetry, i.e., the automatic classification of dense point clouds using the machine learning (ML) technology for the refraction correction on the fluvial water table. The applied methodology for the acquisition of multiple photogrammetric flights was made through UAV drones, also in RTK configuration, for various locations along the Orco River, sited in Piedmont (Italy) and georeferenced with GNSS—RTK topographic method. The authors considered five topographic fluvial cross-sections to set the correction methodology. The automatic classification in ML has found a valid identification of different patterns (Water, Gravel bars, Vegetation, and Ground classes), in specific hydraulic and geomatic conditions. The obtained results about the automatic classification and refraction reduction led us the definition of a new procedure, with precise conditions of validity