Wavelet/shearlet hybridized neural networks for biomedical image restoration

Recently, new programming paradigms have emerged that combine parallelism and numerical computations with algorithmic differentiation. This approach allows for the hybridization of neural network techniques for inverse imaging problems with more traditional methods such as wavelet-based sparsity modelling techniques. The benefits are twofold: on the one hand traditional methods with well-known properties can be integrated in neural networks, either as separate layers or tightly integrated in the network, on the other hand, parameters in traditional methods can be trained end-to-end from datasets in a neural network "fashion" (e.g., using Adagrad or Adam optimizers). In this paper, we explore these hybrid neural networks in the context of shearlet-based regularization for the purpose of biomedical image restoration. Due to the reduced number of parameters, this approach seems a promising strategy especially when dealing with small training data sets

Medical image denoising using convolutional denoising autoencoders

Image denoising is an important pre-processing step in medical image analysis. Different algorithms have been proposed in past three decades with varying denoising performances. More recently, having outperformed all conventional methods, deep learning based models have shown a great promise. These methods are however limited for requirement of large training sample size and high computational costs. In this paper we show that using small sample size, denoising autoencoders constructed using convolutional layers can be used for efficient denoising of medical images. Heterogeneous images can be combined to boost sample size for increased denoising performance. Simplest of networks can reconstruct images with corruption levels so high that noise and signal are not differentiable to human eye.Comment: To appear: 6 pages, paper to be published at the Fourth Workshop on Data Mining in Biomedical Informatics and Healthcare at ICDM, 201

Blind Source Separation: the Sparsity Revolution

International audienceOver the last few years, the development of multi-channel sensors motivated interest in methods for the coherent processing of multivariate data. Some specific issues have already been addressed as testified by the wide literature on the so-called blind source separation (BSS) problem. In this context, as clearly emphasized by previous work, it is fundamental that the sources to be retrieved present some quantitatively measurable diversity. Recently, sparsity and morphological diversity have emerged as a novel and effective source of diversity for BSS. We give here some essential insights into the use of sparsity in source separation and we outline the essential role of morphological diversity as being a source of diversity or contrast between the sources. This paper overviews a sparsity-based BSS method coined Generalized Morphological Component Analysis (GMCA) that takes advantages of both morphological diversity and sparsity, using recent sparse overcomplete or redundant signal representations. GMCA is a fast and efficient blind source separation method. In remote sensing applications, the specificity of hyperspectral data should be accounted for. We extend the proposed GMCA framework to deal with hyperspectral data. In a general framework, GMCA provides a basis for multivariate data analysis in the scope of a wide range of classical multivariate data restorate. Numerical results are given in color image denoising and inpainting. Finally, GMCA is applied to the simulated ESA/Planck data. It is shown to give effective astrophysical component separation

Wavelets and partial differential equations for image denoising

In this paper a wavelet based model for image de-noising is presented. Wavelet coefficients are modelled as waves that grow while dilating along scales. The model establishes a precise link between corresponding modulus maxima in the wavelet domain and then allows to predict wavelet coefficients at each scale from the first one. This property combined with the theoretical results about the characterization of singularities in the wavelet domain enables to discard noise. Significant structures of the image are well recovered while some annoying artifacts along image edges are reduced. Some experimental results show that the proposed approach outperforms the most recent and effective wavelet based denoising schemes