Emerged Coupling of Motor Control and Morphological Development in Evolution of Multi-cellular Animats

A model for co-evolving behavior control and morphological development is presented in this paper. The development of the morphology starts with a single cell that is able to divide or die, which is controlled by a gene regulatory network. The cells are connected by springs and form the morphology of the grown individuals. The movements of animats are resulted from the shrinking and relaxation of the springs connecting the lateral cells on the body morphology. The gene regulatory network, together with the frequency and phase shifts of the spring movements are evolved to maximize the distance that the animats can swim in a given time interval. To facilitate the evolution of swimming animats, a term that awards an elongated morphology is also included in the fitness function. We show that animats with different body-plans emerge in the evolutionary runs and that the evolved movement control strategy is coupled with the body plan

The evolutionary emergence of neural organisation in computational models of primitive organisms

Over the decades, the question why did neural organisation emerge in the way that it did? has proved to be massively elusive. Whilst much of the literature paints a picture of common ancestry the idea that a species at the root of the tree of nervous system evolution spawned numerous descendants the actual evolutionary forces responsible for such changes, major transitions or otherwise, have been less clear. The view presented in this thesis is that via interactions with the environment, neural organisation has emerged in concert with the constraints enforced by body plan morphology and a need to process information eciently and robustly. Whilst these factors are two smaller parts of a much greater whole, their impact during the evolutionary process cannot be ignored, for they are fundamentally signicant. Thus computer simulations have been developed to provide insight into how neural organisation of an articial agent should emerge given the constraints of its body morphology, its symmetry, feedback from the environment, and a loss of energy. The first major finding is that much of the computational process of the nervous system can be ooaded to the body morphology, which has a commensurate bearing on neural architecture, neural dynamics and motor symmetry. The second major finding is that sensory feedback strengthens the dynamic coupling between the neural system and the body plan morphology, resulting in minimal neural circuitry yet more ecient agent behaviour. The third major finding is that under the constraint of energy loss, neural circuitry again emerges to be minimalistic. Throughout, an emphasis is placed on the coupling between the nervous system and body plan morphology which are known in the literature to be tightly integrated; accordingly, both are considered on equal footings

Layered control architectures in robots and vertebrates

We revieiv recent research in robotics, neuroscience, evolutionary neurobiology, and ethology with the aim of highlighting some points of agreement and convergence. Specifically, we com pare Brooks' (1986) subsumption architecture for robot control with research in neuroscience demonstrating layered control systems in vertebrate brains, and with research in ethology that emphasizes the decomposition of control into multiple, intertwined behavior systems. From this perspective we then describe interesting parallels between the subsumption architecture and the natural layered behavior system that determines defense reactions in the rat. We then consider the action selection problem for robots and vertebrates and argue that, in addition to subsumption- like conflict resolution mechanisms, the vertebrate nervous system employs specialized selection mechanisms located in a group of central brain structures termed the basal ganglia. We suggest that similar specialized switching mechanisms might be employed in layered robot control archi tectures to provide effective and flexible action selection

Behavior finding: Morphogenetic Designs Shaped by Function

Evolution has shaped an incredible diversity of multicellular living organisms, whose complex forms are self-made through a robust developmental process. This fundamental combination of biological evolution and development has served as an inspiration for novel engineering design methodologies, with the goal to overcome the scalability problems suffered by classical top-down approaches. Top-down methodologies are based on the manual decomposition of the design into modular, independent subunits. In contrast, recent computational morphogenetic techniques have shown that they were able to automatically generate truly complex innovative designs. Algorithms based on evolutionary computation and artificial development have been proposed to automatically design both the structures, within certain constraints, and the controllers that optimize their function. However, the driving force of biological evolution does not resemble an enumeration of design requirements, but much rather relies on the interaction of organisms within the environment. Similarly, controllers do not evolve nor develop separately, but are woven into the organism’s morphology. In this chapter, we discuss evolutionary morphogenetic algorithms inspired by these important aspects of biological evolution. The proposed methodologies could contribute to the automation of processes that design “organic” structures, whose morphologies and controllers are intended to solve a functional problem. The performance of the algorithms is tested on a class of optimization problems that we call behavior-finding. These challenges are not explicitly based on morphology or controller constraints, but only on the solving abilities and efficacy of the design. Our results show that morphogenetic algorithms are well suited to behavior-finding

The Effect of Proprioceptive Feedback on the Distribution of Sensory Information in a Model of an Undulatory Organism

In an animal, a crucial factor concerning the arrival of information at the sensors and subsequent transmission to the effectors, is how it is distributed. At the same time, higher animals also employ proprioceptive feedback so that their respective neural circuits have information regarding the state of the animal body. In order to disseminate what this practically means for the distribution of sensory information, we have modeled a segmented swimming organism (animat) coevolving its nervous system and body plan morphology. In a simulated aquatic environment, we find that animats artificially endowed with proprioceptive feedback are able to evolve completely decoupled central pattern generators (CPGs) meaning that they emerge without any connections made to neural circuits in adjacent body segments. Without such feedback however, we also find that the distribution of sensory information from the head of the animat becomes far more important, with adjacent CPG circuits becoming interconnected. Crucially, this demonstrates that where proprioceptive mechanisms are lacking, more effective delivery of sensory input is essential

Co-evolution of morphology and control in developing structures

The continuous need to increase the efficiency of technical systems requires the utilization of complex adaptive systems which operate in environments which are not completely predictable. Reasons are often random nature of the environment and the fact that not all phenomena which influence the performance of the system can be explained in full detail. As a consequence, the developer often gets confronted with the task to design an adaptive system with the lack of prior knowledge about the problem at hand. The design of adaptive systems, which react autonomously to changes in their environment, requires the coordinated generation of sensors, providing information about the environment, actuators which change the current state of the system and signal processing structures thereby generating suitable reactions to changed conditions. Within the scope of the thesis, the new system growth method has been introduced. It is based on the evolutionary optimization design technique, which can automatically produce the efficient systems with optimal initially non-defined configuration. The final solutions produced by the novel growth method have low dimensional perception, actuation and signal processing structures optimally adjusted to each other during combined evolutionary optimization process. The co-evolutionary system design approach has been realized by the concurrent development and gradual complexification of the sensory, actuation and corresponding signal processing systems during entire optimization. The evolution of flexible system configuration is performed with the standard evolutionary strategies by means of adaptable representation of variable length and therewith variable complexity of the system which it can represent in the further optimization progress. The co-evolution of morphology and control of complex adaptive systems has been successfully performed for the examples of a complex aerodynamic problem of a morphing wing and a virtual intelligent autonomously driving vehicle. The thesis demonstrates the applicability of the concurrent evolutionary design of the optimal morphological configuration, presented as sensory and actuation systems, and the corresponding optimal system controller. Meanwhile, it underlines the potentials of direct genotype – phenotype encodings for the design of complex engineering real-world applications. The thesis argues that often better, cheaper, more robust and adaptive systems can be developed if the entire system is the design target rather than its separate functional parts, like sensors, actuators or controller structure. The simulation results demonstrate that co-evolutionary methods are able to generate systems which can optimally adapt to the unpredicted environmental conditions while at the same time shedding light on the precise synchronization of all functional system parts during its co-developmental process

Dynamics of embodied dissociated cortical cultures for the control of hybrid biological robots.

The thesis presents a new paradigm for studying the importance of interactions between an organism and its environment using a combination of biology and technology: embodying cultured cortical neurons via robotics. From this platform, explanations of the emergent neural network properties leading to cognition are sought through detailed electrical observation of neural activity. By growing the networks of neurons and glia over multi-electrode arrays (MEA), which can be used to both stimulate and record the activity of multiple neurons in parallel over months, a long-term real-time 2-way communication with the neural network becomes possible. A better understanding of the processes leading to biological cognition can, in turn, facilitate progress in understanding neural pathologies, designing neural prosthetics, and creating fundamentally different types of artificial cognition. Here, methods were first developed to reliably induce and detect neural plasticity using MEAs. This knowledge was then applied to construct sensory-motor mappings and training algorithms that produced adaptive goal-directed behavior. To paraphrase the results, most any stimulation could induce neural plasticity, while the inclusion of temporal and/or spatial information about neural activity was needed to identify plasticity. Interestingly, the plasticity of action potential propagation in axons was observed. This is a notion counter to the dominant theories of neural plasticity that focus on synaptic efficacies and is suggestive of a vast and novel computational mechanism for learning and memory in the brain. Adaptive goal-directed behavior was achieved by using patterned training stimuli, contingent on behavioral performance, to sculpt the network into behaviorally appropriate functional states: network plasticity was not only induced, but could be customized. Clinically, understanding the relationships between electrical stimulation, neural activity, and the functional expression of neural plasticity could assist neuro-rehabilitation and the design of neuroprosthetics. In a broader context, the networks were also embodied with a robotic drawing machine exhibited in galleries throughout the world. This provided a forum to educate the public and critically discuss neuroscience, robotics, neural interfaces, cybernetics, bio-art, and the ethics of biotechnology.Ph.D.Committee Chair: Steve M. Potter; Committee Member: Eric Schumacher; Committee Member: Robert J. Butera; Committee Member: Stephan P. DeWeerth; Committee Member: Thomas D. DeMars

Self-organization of Symbiotic Multicellular Structures

This paper presents a new model for the development of artificial creatures from a single cell. The model aims at providing a more biologically plausible abstraction of the morphogenesis and the specialization process, which the organogenesis follows. It is built upon three main elements: a cellular physics system that simulates division and intercellular adhesion dynamics, a simplified cell cycle offering to the cells the possibility to select actions such as division, quiescence, differentiation or apoptosis and, finally, a cell specialization mechanism quantifying the ability to perform different functions. An evolved artificial gene regulatory network is employed as a cell controller. As a proof-of-concept, we present two experiments where the morphology of a multicellular organism is guided by cell weaknesses and efficiency at performing different functions under environmental stress

Adaptive behaviour through morphological plasticity in natural and artificial systems.

Our concept of intelligence is changing. Embodiment has led to the rise of morphologies in Artificial Intelligence (AI) research. This thesis focuses on two research questions: 1) How can system morphologies, well-adapted to changing environments, be designed? 2) How can adaptive behaviour be generated through morphology? It is the fundamental argument of this thesis that morphological plasticity (MP), the environmentally induced variation in growth or development, can provide a solution to both questions. Specifically, this thesis is based around a detailed study of diatom valve morphogenesis. Diatoms, a unicellular organism, construct intricate siliceous structures (valves) around themselves which exhibit high plasticity to the environment. Diatom valve morphogenesis is a good example of how morphologies can be well-adapted to changing environments, an open problem in AI, and how adaptive behaviour can be generated through morphological processes alone. Through a constructivist approach this thesis contributes to both understanding of MP in natural systems and the design of MP algorithms for artificial adaptive systems. Several original models and frameworks are defined within this thesis: the Nature's Batik Model of basic diatom valve morphogenesis the Cellanimat, a 'Dynamic Morphology' based on the unicell, capable of MP driven adaptive behaviour through its unique 'Artificial Cytoskeleton' model of cytoskeletal dynamics the Environment-Phenotype Map framework and the Cellanimat Colony Model, which combines all previous models for the investigation of MP mechanisms during diatom colony formation. Cellanimat dynamics and optimization are thoroughly investigated and the model is shown to be multi functional, evolvable, scalable and reasonably robust