Coarse-grained reconfigurable array architectures

Coarse-Grained Reconfigurable Array (CGRA) architectures accelerate the same inner loops that benefit from the high ILP support in VLIW architectures. By executing non-loop code on other cores, however, CGRAs can focus on such loops to execute them more efficiently. This chapter discusses the basic principles of CGRAs, and the wide range of design options available to a CGRA designer, covering a large number of existing CGRA designs. The impact of different options on flexibility, performance, and power-efficiency is discussed, as well as the need for compiler support. The ADRES CGRA design template is studied in more detail as a use case to illustrate the need for design space exploration, for compiler support and for the manual fine-tuning of source code

Static resource models for code generation of embedded processors

xii+129hlm.;24c

A Modeling Approach based on UML/MARTE for GPU Architecture

Nowadays, the High Performance Computing is part of the context of embedded systems. Graphics Processing Units (GPUs) are more and more used in acceleration of the most part of algorithms and applications. Over the past years, not many efforts have been done to describe abstractions of applications in relation to their target architectures. Thus, when developers need to associate applications and GPUs, for example, they find difficulty and prefer using API for these architectures. This paper presents a metamodel extension for MARTE profile and a model for GPU architectures. The main goal is to specify the task and data allocation in the memory hierarchy of these architectures. The results show that this approach will help to generate code for GPUs based on model transformations using Model Driven Engineering (MDE).Comment: Symposium en Architectures nouvelles de machines (SympA'14) (2011

FPGA acceleration of DNA sequence alignment: design analysis and optimization

Existing FPGA accelerators for short read mapping often fail to utilize the complete biological information in sequencing data for simple hardware design, leading to missed or incorrect alignment. In this work, we propose a runtime reconfigurable alignment pipeline that considers all information in sequencing data for the biologically accurate acceleration of short read mapping. We focus our efforts on accelerating two string matching techniques: FM-index and the Smith-Waterman algorithm with the affine-gap model which are commonly used in short read mapping. We further optimize the FPGA hardware using a design analyzer and merger to improve alignment performance. The contributions of this work are as follows. 1. We accelerate the exact-match and mismatch alignment by leveraging the FM-index technique. We optimize memory access by compressing the data structure and interleaving the access with multiple short reads. The FM-index hardware also considers complete information in the read data to maximize accuracy. 2. We propose a seed-and-extend model to accelerate alignment with indels. The FM-index hardware is extended to support the seeding stage while a Smith-Waterman implementation with the affine-gap model is developed on FPGA for the extension stage. This model can improve the efficiency of indel alignment with comparable accuracy versus state-of-the-art software. 3. We present an approach for merging multiple FPGA designs into a single hardware design, so that multiple place-and-route tasks can be replaced by a single task to speed up functional evaluation of designs. We first experiment with this approach to demonstrate its feasibility for different designs. Then we apply this approach to optimize one of the proposed FPGA aligners for better alignment performance.Open Acces

The hArtes Tool Chain

This chapter describes the different design steps needed to go from legacy code to a transformed application that can be efficiently mapped on the hArtes platform

Baseband analog front-end and digital back-end for reconfigurable multi-standard terminals

Multimedia applications are driving wireless network operators to add high-speed data services such as Edge (E-GPRS), WCDMA (UMTS) and WLAN (IEEE 802.11a,b,g) to the existing GSM network. This creates the need for multi-mode cellular handsets that support a wide range of communication standards, each with a different RF frequency, signal bandwidth, modulation scheme etc. This in turn generates several design challenges for the analog and digital building blocks of the physical layer. In addition to the above-mentioned protocols, mobile devices often include Bluetooth, GPS, FM-radio and TV services that can work concurrently with data and voice communication. Multi-mode, multi-band, and multi-standard mobile terminals must satisfy all these different requirements. Sharing and/or switching transceiver building blocks in these handsets is mandatory in order to extend battery life and/or reduce cost. Only adaptive circuits that are able to reconfigure themselves within the handover time can meet the design requirements of a single receiver or transmitter covering all the different standards while ensuring seamless inter-interoperability. This paper presents analog and digital base-band circuits that are able to support GSM (with Edge), WCDMA (UMTS), WLAN and Bluetooth using reconfigurable building blocks. The blocks can trade off power consumption for performance on the fly, depending on the standard to be supported and the required QoS (Quality of Service) leve

Just In Time Assembly (JITA) - A Run Time Interpretation Approach for Achieving Productivity of Creating Custom Accelerators in FPGAs

The reconfigurable computing community has yet to be successful in allowing programmers to access FPGAs through traditional software development flows. Existing barriers that prevent programmers from using FPGAs include: 1) knowledge of hardware programming models, 2) the need to work within the vendor specific CAD tools and hardware synthesis. This thesis presents a series of published papers that explore different aspects of a new approach being developed to remove the barriers and enable programmers to compile accelerators on next generation reconfigurable manycore architectures. The approach is entitled Just In Time Assembly (JITA) of hardware accelerators. The approach has been defined to allow hardware accelerators to be built and run through software compilation and run time interpretation outside of CAD tools and without requiring each new accelerator to be synthesized. The approach advocates the use of libraries of pre-synthesized components that can be referenced through symbolic links in a similar fashion to dynamically linked software libraries. Synthesis still must occur but is moved out of the application programmers software flow and into the initial coding process that occurs when programming patterns that define a Domain Specific Language (DSL) are first coded. Programmers see no difference between creating software or hardware functionality when using the DSL. A new run time interpreter is introduced to assemble the individual pre-synthesized hardware accelerators that comprise the accelerator functionality within a configurable tile array of partially reconfigurable slots at run time. Quantitative results are presented that compares utilization, performance, and productivity of the approach to what would be achieved by full custom accelerators created through traditional CAD flows using hardware programming models and passing through synthesis

Compiler and Architecture Design for Coarse-Grained Programmable Accelerators

abstract: The holy grail of computer hardware across all market segments has been to sustain performance improvement at the same pace as silicon technology scales. As the technology scales and the size of transistors shrinks, the power consumption and energy usage per transistor decrease. On the other hand, the transistor density increases significantly by technology scaling. Due to technology factors, the reduction in power consumption per transistor is not sufficient to offset the increase in power consumption per unit area. Therefore, to improve performance, increasing energy-efficiency must be addressed at all design levels from circuit level to application and algorithm levels. At architectural level, one promising approach is to populate the system with hardware accelerators each optimized for a specific task. One drawback of hardware accelerators is that they are not programmable. Therefore, their utilization can be low as they perform one specific function. Using software programmable accelerators is an alternative approach to achieve high energy-efficiency and programmability. Due to intrinsic characteristics of software accelerators, they can exploit both instruction level parallelism and data level parallelism. Coarse-Grained Reconfigurable Architecture (CGRA) is a software programmable accelerator consists of a number of word-level functional units. Motivated by promising characteristics of software programmable accelerators, the potentials of CGRAs in future computing platforms is studied and an end-to-end CGRA research framework is developed. This framework consists of three different aspects: CGRA architectural design, integration in a computing system, and CGRA compiler. First, the design and implementation of a CGRA and its instruction set is presented. This design is then modeled in a cycle accurate system simulator. The simulation platform enables us to investigate several problems associated with a CGRA when it is deployed as an accelerator in a computing system. Next, the problem of mapping a compute intensive region of a program to CGRAs is formulated. From this formulation, several efficient algorithms are developed which effectively utilize CGRA scarce resources very well to minimize the running time of input applications. Finally, these mapping algorithms are integrated in a compiler framework to construct a compiler for CGRADissertation/ThesisDoctoral Dissertation Computer Science 201