Effects of ionic concentration dynamics on neuronal activity

Neuronen sind bei der Informationsübertragung des zentralen Nervensystems von entscheidender Bedeutung. Ihre Aktivität liegt der Signalverarbeitung und höheren kognitiven Prozessen zugrunde. Neuronen sind in den extrazellulären Raum eingebettet, der mehrere Teilchen, darunter auch Ionen, enthält. Ionenkonzentrationen sind nicht statisch. Intensive neuronale Aktivität kann intrazelluläre und extrazelluläre Ionenkonzentrationen verändern. In dieser Arbeit untersuche ich das Wechselspiel zwischen neuronaler Aktivität und der Dynamik der Ionenkonzentrationen. Dabei konzentriere ich mich hauptsächlich auf extrazelluläre Kalium- und intrazelluläre Natriumkonzentrationen. Mit Hilfe der Theorie dynamischer Systeme zeige ich, wie moderate Änderungen dieser Ionenkonzentrationen die neuronale Aktivität qualitativ verändern können, wodurch sich möglicherweise die Signalverarbeitung verändert. Dann modelliere ich ein leitfähigkeitsbasiertes neuronales Netzwerk mit Spikes. Das Modell sagt voraus, dass eine moderate Änderung der Konzentrationen, die einen Mikroschaltkreis von Neuronen umgeben, die Leistungsspektraldichte der Populationsaktivität verändern könnte. Insgesamt unterstreicht diese Arbeit die Bedeutung der Dynamik der Ionenkonzentrationen für das Verständnis neuronaler Aktivität auf langen Zeitskalen und liefert technische Erkenntnisse darüber, wie das Zusammenspiel zwischen ihnen modelliert und analysiert werden kann.Neurons are essential in the information transfer mechanisms of the central nervous system. Their activity underlies both basic signal processing, and higher cognitive processes. Neurons are embedded in the extracellular space, which contains multiple particles, including ions which are vital to their functioning. Ionic concentrations are not static, intense neuronal activity alters the intracellular and extracellular ionic concentrations which in turn affect neuronal functioning. In this thesis, I study the interplay between neuronal activity and ionic concentration dynamics. I focus specifically on the extracellular potassium and intracellular sodium concentrations. Using dynamical systems theory, I illustrate how moderate changes in these ionic concentrations can qualitatively change neuronal activity, potentially altering signal processing. I then model a conductance-based spiking neural network. The model predicts that a moderate change in the concentrations surrounding a microcircuit of neurons could modify the power spectral density of the population activity. Altogether, this work highlights the need to consider ionic concentration dynamics to understand neuronal activity on long time scales and provides technical insights on how to model and analyze the interplay between them

Noise induced processes in neural systems

Real neurons, and their networks, are far too complex to be described exactly by simple deterministic equations. Any description of their dynamics must therefore incorporate noise to some degree. It is my thesis that the nervous system is organized in such a way that its performance is optimal, subject to this constraint. I further contend that neuronal dynamics may even be enhanced by noise, when compared with their deterministic counter-parts. To support my thesis I will present and analyze three case studies. I will show how noise might (i) extend the dynamic range of mammalian cold-receptors and other cells that exhibit a temperature-dependent discharge; (ii) feature in the perception of ambiguous figures such as the Necker cube; (iii) alter the discharge pattern of single cells

Neuroelectronic interfacing with cultured multielectrode arrays toward a cultured probe

Efficient and selective electrical stimulation and recording of neural activity in peripheral, spinal, or central pathways requires multielectrode arrays at micrometer scale. ¿Cultured probe¿ devices are being developed, i.e., cell-cultured planar multielectrode arrays (MEAs). They may enhance efficiency and selectivity because neural cells have been grown over and around each electrode site as electrode-specific local networks. If, after implantation, collateral sprouts branch from a motor fiber (ventral horn area) and if they can be guided and contacted to each ¿host¿ network, a very selective and efficient interface will result. Four basic aspects of the design and development of a cultured probe, coated with rat cortical or dorsal root ganglion neurons, are described. First, the importance of optimization of the cell-electrode contact is presented. It turns out that impedance spectroscopy, and detailed modeling of the electrode-cell interface, is a very helpful technique, which shows whether a cell is covering an electrode and how strong the sealing is. Second, the dielectrophoretic trapping method directs cells efficiently to desired spots on the substrate, and cells remain viable after the treatment. The number of cells trapped is dependent on the electric field parameters and the occurrence of a secondary force, a fluid flow (as a result of field-induced heating). It was found that the viability of trapped cortical cells was not influenced by the electric field. Third, cells must adhere to the surface of the substrate and form networks, which are locally confined, to one electrode site. For that, chemical modification of the substrate and electrode areas with various coatings, such as polyethyleneimine (PEI) and fluorocarbon monolayers promotes or inhibits adhesion of cells. Finally, it is shown how PEI patterning, by a stamping technique, successfully guides outgrowth of collaterals from a neonatal rat lumbar spinal cord explant, after six days in cultur

Nonlinear physics of electrical wave propagation in the heart: a review

The beating of the heart is a synchronized contraction of muscle cells (myocytes) that are triggered by a periodic sequence of electrical waves (action potentials) originating in the sino-atrial node and propagating over the atria and the ventricles. Cardiac arrhythmias like atrial and ventricular fibrillation (AF,VF) or ventricular tachycardia (VT) are caused by disruptions and instabilities of these electrical excitations, that lead to the emergence of rotating waves (VT) and turbulent wave patterns (AF,VF). Numerous simulation and experimental studies during the last 20 years have addressed these topics. In this review we focus on the nonlinear dynamics of wave propagation in the heart with an emphasis on the theory of pulses, spirals and scroll waves and their instabilities in excitable media and their application to cardiac modeling. After an introduction into electrophysiological models for action potential propagation, the modeling and analysis of spatiotemporal alternans, spiral and scroll meandering, spiral breakup and scroll wave instabilities like negative line tension and sproing are reviewed in depth and discussed with emphasis on their impact in cardiac arrhythmias.Peer ReviewedPreprin

Neuronal oscillations: from single-unit activity to emergent dynamics and back

L’objectiu principal d’aquesta tesi és avançar en la comprensió del processament d’informació en xarxes neuronals en presència d’oscil lacions subumbrals. La majoria de neurones propaguen la seva activitat elèctrica a través de sinapsis químiques que són activades, exclusivament, quan el corrent elèctric que les travessa supera un cert llindar. És per aquest motiu que les descàrregues ràpides i intenses produïdes al soma neuronal, els anomenats potencials d’acció, són considerades la unitat bàsica d’informació neuronal, és a dir, el senyal mínim i necessari per a iniciar la comunicació entre dues neurones. El codi neuronal és entès, doncs, com un llenguatge binari que expressa qualsevol missatge (estímul sensorial, memòries, etc.) en un tren de potencials d’acció. Tanmateix, cap funció cognitiva rau en la dinàmica d’una única neurona. Circuits de milers de neurones connectades entre sí donen lloc a determinats ritmes, palesos en registres d’activitat colectiva com els electroencefalogrames (EEG) o els potencials de camp local (LFP). Si els potencials d’acció de cada cèl lula, desencadenats per fluctuacions estocàstiques de les corrents sinàptiques, no assolissin un cert grau de sincronia, no apareixeria aquesta periodicitat a nivell de xarxa. Per tal de poder entendre si aquests ritmes intervenen en el codi neuronal hem estudiat tres situacions. Primer, en el Capítol 2, hem mostrat com una cadena oberta de neurones amb un potencial de membrana intrínsecament oscil latori filtra un senyal periòdic arribant per un dels extrems. La resposta de cada neurona (pulsar o no pulsar) depèn de la seva fase, de forma que cada una d’elles rep un missatge filtrat per la precedent. A més, cada potencial d’acció presinàptic provoca un canvi de fase en la neurona postsinàptica que depèn de la seva posició en l’espai de fases. Els períodes d’entrada capaços de sincronitzar les oscil lacions subumbrals són aquells que mantenen la fase d’arribada dels potencials d’acció fixa al llarg de la cadena. Per tal de què el missatge arribi intacte a la darrera neurona cal, a més a més, que aquesta fase permeti la descàrrega del voltatge transmembrana. En segon cas, hem estudiat una xarxa neuronal amb connexions tant a veïns propers com de llarg abast, on les oscil lacions subumbrals emergeixen de l’activitat col lectiva reflectida en els corrents sinàptics (o equivalentment en el LFP). Les neurones inhibidores aporten un ritme a l’excitabilitat de la xarxa, és a dir, que els episodis en què la inhibició és baixa, la probabilitat d’una descàrrega global de la població neuronal és alta. En el Capítol 3 mostrem com aquest ritme implica l’aparició d’una bretxa en la freqüència de descàrrega de les neurones: o bé polsen espaiadament en el temps o bé en ràfegues d’elevada intensitat. La fase del LFP determina l’estat de la xarxa neuronal codificant l’activitat de la població: els mínims indiquen la descàrrega simultània de moltes neurones que, ocasionalment, han superat el llindar d’excitabilitat degut a un decreixement global de la inhibició, mentre que els màxims indiquen la coexistència de ràfegues en diferents punts de la xarxa degut a decreixements locals de la inhibició en estats globals d’excitació. Aquesta dinàmica és possible gràcies al domini de la inhibició sobre l’excitació. En el Capítol 4 considerem acoblament entre dues xarxes neuronals per tal d’estudiar la interacció entre ritmes diferents. Les oscil lacions indiquen recurrència en la sincronització de l’activitat col lectiva, de manera que durant aquestes finestres temporals una població optimitza el seu impacte en una xarxa diana. Quan el ritme de la població receptora i el de l’emissora difereixen significativament, l’eficiència en la comunicació decreix, ja que les fases de màxima resposta de cada senyal LFP no mantenen una diferència constant entre elles. Finalment, en el Capítol 5 hem estudiat com les oscil lacions col lectives pròpies de l’estat de son donen lloc al fenomen de coherència estocàstica. Per a una intensitat òptima del soroll, modulat per l’excitabilitat de la xarxa, el LFP assoleix una regularitat màxima donant lloc a un període refractari de la població neuronal. En resum, aquesta Tesi mostra escenaris d’interacció entre els potencials d’acció, característics de la dinàmica de neurones individuals, i les oscil lacions subumbrals, fruit de l’acoblament entre les cèl lules i ubiqües en la dinàmica de poblacions neuronals. Els resultats obtinguts aporten funcionalitat a aquests ritmes emergents, agents sincronitzadors i moduladors de les descàrregues neuronals i reguladors de la comunicació entre xarxes neuronals.The main objective of this thesis is to better understand information processing in neuronal networks in the presence of subthreshold oscillations. Most neurons propagate their electrical activity via chemical synapses, which are only activated when the electric current that passes through them surpasses a certain threshold. Therefore, fast and intense discharges produced at the neuronal soma (the action potentials or spikes) are considered the basic unit of neuronal information. The neuronal code is understood, then, as a binary language that expresses any message (sensory stimulus, memories, etc.) in a train of action potentials. Circuits of thousands of interconnected neurons give rise to certain rhythms, revealed in collective activity measures such as electroencephalograms (EEG) and local field potentials (LFP). Synchronization of action potentials of each cell, triggered by stochastic fluctuations of the synaptic currents, cause this periodicity at the network level.To understand whether these rhythms are involved in the neuronal code we studied three situations. First, in Chapter 2, we showed how an open chain of neurons with an intrinsically oscillatory membrane potential filters a periodic signal coming from one of its ends. The response of each neuron (to spike or not) depends on its phase, so that each cell receives a message filtered by the preceding one. Each presynaptic action potential causes a phase change in the postsynaptic neuron, which depends on its position in the phase space. Those incoming periods that are able to synchronize the subthreshold oscillations, keep the phase of arrival of action potentials fixed along the chain. The original message reaches intact the last neuron provided that this phase allows the discharge of the transmembrane voltage.I the second case, we studied a neuronal network with connections to both long range and close neighbors, in which the subthreshold oscillations emerge from the collective activity apparent in the synaptic currents. The inhibitory neurons provide a rhythm to the excitability of the network. When inhibition is low, the likelihood of a global discharge of the neuronal population is high. In Chapter 3 we show how this rhythm causes a gap in the discharge frequency of neurons: either they pulse single spikes or they fire bursts of high intensity. The LFP phase determines the state of the neuronal network, coding the activity of the population: its minima indicate the simultaneous discharge of many neurons, while its maxima indicate the coexistence of bursts due to local decreases of inhibition at global states of excitation. In Chapter 4 we consider coupling between two neural networks in order to study the interaction between different rhythms. The oscillations indicate recurrence in the synchronization of collective activity, so that during these time windows a population optimizes its impact on a target network. When the rhythm of the emitter and receiver population differ significantly, the communication efficiency decreases as the phases of maximum response of each LFP signal do not maintain a constant difference between them.Finally, in Chapter 5 we studied how oscillations typical of the collective sleep state give rise to stochastic coherence. For an optimal noise intensity, modulated by the excitability of the network, the LFP reaches a maximal regularity leading to a refractory period of the neuronal population.In summary, this Thesis shows scenarios of interaction between action potentials, characteristics of the dynamics of individual neurons, and the subthreshold oscillations, outcome of the coupling between the cells and ubiquitous in the dynamics of neuronal populations . The results obtained provide functionality to these emerging rhythms, triggers of synchronization and modulator agents of the neuronal discharges and regulators of the communication between neuronal networks

Computational Study of the Mechanisms Underlying Oscillation in Neuronal Locomotor Circuits

In this thesis we model two very different movement-related neuronal circuits, both of which produce oscillatory patterns of activity. In one case we study oscillatory activity in the basal ganglia under both normal and Parkinsonian conditions. First, we used a detailed Hodgkin-Huxley type spiking model to investigate the activity patterns that arise when oscillatory cortical input is transmitted to the globus pallidus via the subthalamic nucleus. Our model reproduced a result from rodent studies which shows that two anti-phase oscillatory groups of pallidal neurons appear under Parkinsonian conditions. Secondly, we used a population model of the basal ganglia to study whether oscillations could be locally generated. The basal ganglia are thought to be organised into multiple parallel channels. In our model, isolated channels could not generate oscillations, but if the lateral inhibition between channels is sufficiently strong then the network can act as a rhythm-generating ``pacemaker'' circuit. This was particularly true when we used a set of connection strength parameters that represent the basal ganglia under Parkinsonian conditions. Since many things are not known about the anatomy and electrophysiology of the basal ganglia, we also studied oscillatory activity in another, much simpler, movement-related neuronal system: the spinal cord of the Xenopus tadpole. We built a computational model of the spinal cord containing approximately 1,500 biologically realistic Hodgkin-Huxley neurons, with synaptic connectivity derived from a computational model of axon growth. The model produced physiological swimming behaviour and was used to investigate which aspects of axon growth and neuron dynamics are behaviourally important. We found that the oscillatory attractor associated with swimming was remarkably stable, which suggests that, surprisingly, many features of axonal growth and synapse formation are not necessary for swimming to emerge. We also studied how the same spinal cord network can generate a different oscillatory pattern in which neurons on both sides of the body fire synchronously. Our results here suggest that under normal conditions the synchronous state is unstable or weakly stable, but that even small increases in spike transmission delays act to stabilise it. Finally, we found that although the basal ganglia and the tadpole spinal cord are very different systems, the underlying mechanism by which they can produce oscillations may be remarkably similar. Insights from the tadpole model allow us to predict how the basal ganglia model may be capable of producing multiple patterns of oscillatory activity

Astrocytic Ion Dynamics: Implications for Potassium Buffering and Liquid Flow

We review modeling of astrocyte ion dynamics with a specific focus on the implications of so-called spatial potassium buffering, where excess potassium in the extracellular space (ECS) is transported away to prevent pathological neural spiking. The recently introduced Kirchoff-Nernst-Planck (KNP) scheme for modeling ion dynamics in astrocytes (and brain tissue in general) is outlined and used to study such spatial buffering. We next describe how the ion dynamics of astrocytes may regulate microscopic liquid flow by osmotic effects and how such microscopic flow can be linked to whole-brain macroscopic flow. We thus include the key elements in a putative multiscale theory with astrocytes linking neural activity on a microscopic scale to macroscopic fluid flow.Comment: 27 pages, 7 figure