UBathy: a new approach for bathymetric inversion from video imagery

A new approach to infer the bathymetry from coastal video monitoring systems is presented. The methodology uses principal component analysis of the Hilbert transform of video images to obtain the components of the wave propagation field and their corresponding frequency and wavenumber. Incident and reflected constituents and subharmonics components are also found. Local water depth is then successfully estimated through wave dispersion relationship. The method is first applied to monochromatic and polychromatic synthetic wave trains propagated using linear wave theory over an alongshore uniform bathymetry in order to analyze the influence of different parameters on the results. To assess the ability of the approach to infer the bathymetry under more realistic conditions and to explore the influence of other parameters, nonlinear wave propagation is also performed using a fully nonlinear Boussinesq-type model over a complex bathymetry. In the synthetic cases, the relative root mean square error obtained in bathymetry recovery (for water depths 0.75m¿h¿8.0m) ranges from ~1% to ~3% for infinitesimal-amplitude wave cases (monochromatic or polychromatic) to ~15% in the most complex case (nonlinear polychromatic waves). Finally, the new methodology is satisfactorily validated through a real field site video.Postprint (published version

Measurement of Micro-bathymetry with a GOPRO Underwater Stereo Camera Pair

A GO-PRO underwater stereo camera kit has been used to measure the 3D topography (bathymetry) of a patch of seafloor producing a point cloud with a spatial data density of 15 measurements per 3 mm grid square and an standard deviation of less than 1 cm A GO-PRO camera is a fixed focus, 11 megapixel, still-frame (or 1080p high-definition video) camera, whose small form-factor and water-proof housing has made it popular with sports enthusiasts. A stereo camera kit is available providing a waterproof housing (to 61 m / 200 ft) for a pair of cameras. Measures of seafloor micro-bathymetrycapable of resolving seafloor features less than 1 cm in amplitude were possible from the stereoreconstruction. Bathymetric measurements of this scale provide important ground-truth data and boundary condition information for modeling of larger scale processes whose details depend on small-scale variations. Examples include modeling of turbulent water layers, seafloor sediment transfer and acoustic backscatter from bathymetric echo sounders

Emerging technologies for reef fisheries research and management [held during the 56th annual Gulf and Caribbean Fisheries Institute meeting in Tortola, British Virgin Islands, November 2003]

This publication of the NOAA Professional Paper NMFS Series is the product of a special symposium on “Emerging Technologies for Reef Fisheries Research and Management” held during the 56th annual Gulf and Caribbean Fisheries Institute meeting in Tortola, British Virgin Islands, November 2003. The purpose of this collection is to highlight the diversity of questions and issues in reef fisheries management that are benefiting from applications of technology. Topics cover a wide variety of questions and issues from the study of individual behavior, distribution and abundance of groups and populations, and associations between habitats and fish and shellfish species.(PDF files contains 124 pages.

The GeoClaw software for depth-averaged flows with adaptive refinement

Many geophysical flow or wave propagation problems can be modeled with two-dimensional depth-averaged equations, of which the shallow water equations are the simplest example. We describe the GeoClaw software that has been designed to solve problems of this nature, consisting of open source Fortran programs together with Python tools for the user interface and flow visualization. This software uses high-resolution shock-capturing finite volume methods on logically rectangular grids, including latitude--longitude grids on the sphere. Dry states are handled automatically to model inundation. The code incorporates adaptive mesh refinement to allow the efficient solution of large-scale geophysical problems. Examples are given illustrating its use for modeling tsunamis, dam break problems, and storm surge. Documentation and download information is available at www.clawpack.org/geoclawComment: 18 pages, 11 figures, Animations and source code for some examples at http://www.clawpack.org/links/awr10 Significantly modified from original posting to incorporate suggestions of referee

GeoZui3D: Data Fusion for Interpreting Oceanographic Data

GeoZui3D stands for Geographic Zooming User Interface. It is a new visualization software system designed for interpreting multiple sources of 3D data. The system supports gridded terrain models, triangular meshes, curtain plots, and a number of other display objects. A novel center of workspace interaction method unifies a number of aspects of the interface. It creates a simple viewpoint control method, it helps link multiple views, and is ideal for stereoscopic viewing. GeoZui3D has a number of features to support real-time input. Through a CORBA interface external entities can influence the position and state of objects in the display. Extra windows can be attached to moving objects allowing for their position and data to be monitored. We describe the application of this system for heterogeneous data fusion, for multibeam QC and for ROV/AUV monitoring

Radar sounding using the Cassini altimeter waveform modeling and Monte Carlo approach for data inversion observations of Titan's seas

Recently, the Cassini RADAR has been used as a sounder to probe the depth and constrain the composition of hydrocarbon seas on Saturn's largest moon, Titan. Altimetry waveforms from observations over the seas are generally composed of two main reflections: the first from the surface of the liquid and the second from the seafloor. The time interval between these two peaks is a measure of sea depth, and the attenuation from the propagation through the liquid is a measure of the dielectric properties, which is a sensitive property of liquid composition. Radar measurements are affected by uncertainties that can include saturation effects, possible receiver distortion, and processing artifacts, in addition to thermal noise and speckle. To rigorously treat these problems, we simulate the Ku-band altimetry echo received from Titan's seas using a two-layer model, where the surface is represented by a specular reflection and the seafloor is modeled using a facet-based synthetic surface. The simulation accounts for the thermal noise, speckle, analog-to-digital conversion, and block adaptive quantization and allows for possible receiver saturation. We use a Monte Carlo method to compare simulated and observed waveforms and retrieve the probability distributions of depth, surface/subsurface intensity ratio, and subsurface roughness for the individual double-peaked waveform of Ligeia Mare acquired by the Cassini spacecraft in May 2013. This new analysis provides an update to the Ku-band attenuation and results in a new estimate for its loss tangent and composition. We also demonstrate the ability to retrieve bathymetric information from saturated altimetry echoes acquired over Ontario Lacus in December 2008

Sixteen years of bathymetry and waves at San Diego beaches.

Sustained, quantitative observations of nearshore waves and sand levels are essential for testing beach evolution models, but comprehensive datasets are relatively rare. We document beach profiles and concurrent waves monitored at three southern California beaches during 2001-2016. The beaches include offshore reefs, lagoon mouths, hard substrates, and cobble and sandy (medium-grained) sediments. The data span two energetic El Niño winters and four beach nourishments. Quarterly surveys of 165 total cross-shore transects (all sites) at 100 m alongshore spacing were made from the backbeach to 8 m depth. Monthly surveys of the subaerial beach were obtained at alongshore-oriented transects. The resulting dataset consists of (1) raw sand elevation data, (2) gridded elevations, (3) interpolated elevation maps with error estimates, (4) beach widths, subaerial and total sand volumes, (5) locations of hard substrate and beach nourishments, (6) water levels from a NOAA tide gauge (7) wave conditions from a buoy-driven regional wave model, and (8) time periods and reaches with alongshore uniform bathymetry, suitable for testing 1-dimensional beach profile change models

Advanced Mid-Water Tools for 4D Marine Data Fusion and Visualization

Mapping and charting of the seafloor underwent a revolution approximately 20 years ago with the introduction of multibeam sonars -- sonars that provided complete, high-resolution coverage of the seafloor rather than sparse measurements. The initial focus of these sonar systems was the charting of depths in support of safety of navigation and offshore exploration; more recently innovations in processing software have led to approaches to characterize seafloor type and for mapping seafloor habitat in support of fisheries research. In recent years, a new generation of multibeam sonars has been developed that, for the first time, have the ability to map the water column along with the seafloor. This ability will potentially allow multibeam sonars to address a number of critical ocean problems including the direct mapping of fish and marine mammals, the location of mid-water targets and, if water column properties are appropriate, a wide range of physical oceanographic processes. This potential relies on suitable software to make use of all of the new available data. Currently, the users of these sonars have a limited view of the mid-water data in real-time and limited capacity to store it, replay it, or run further analysis. The data also needs to be integrated with other sensor assets such as bathymetry, backscatter, sub-bottom, seafloor characterizations and other assets so that a “complete” picture of the marine environment under analysis can be realized. Software tools developed for this type of data integration should support a wide range of sonars with a unified format for the wide variety of mid-water sonar types. This paper describes the evolution and result of an effort to create a software tool that meets these needs, and details case studies using the new tools in the areas of fisheries research, static target search, wreck surveys and physical oceanographic processes