Finsler Active Contours

©2008 IEEE. Personal use of this material is permitted. However, permission to reprint/republish this material for advertising or promotional purposes or for creating new collective works for resale or distribution to servers or lists, or to reuse any copyrighted component of this work in other works must be obtained from the IEEE. This material is presented to ensure timely dissemination of scholarly and technical work. Copyright and all rights therein are retained by authors or by other copyright holders. All persons copying this information are expected to adhere to the terms and constraints invoked by each author's copyright. In most cases, these works may not be reposted without the explicit permission of the copyright holder.DOI: 10.1109/TPAMI.2007.70713In this paper, we propose an image segmentation technique based on augmenting the conformal (or geodesic) active contour framework with directional information. In the isotropic case, the euclidean metric is locally multiplied by a scalar conformal factor based on image information such that the weighted length of curves lying on points of interest (typically edges) is small. The conformal factor that is chosen depends only upon position and is in this sense isotropic. Although directional information has been studied previously for other segmentation frameworks, here, we show that if one desires to add directionality in the conformal active contour framework, then one gets a well-defined minimization problem in the case that the factor defines a Finsler metric. Optimal curves may be obtained using the calculus of variations or dynamic programming-based schemes. Finally, we demonstrate the technique by extracting roads from aerial imagery, blood vessels from medical angiograms, and neural tracts from diffusion-weighted magnetic resonance imagery

An unconditionally stable finite element scheme for anisotropic curve shortening flow

summary:Based on a recent novel formulation of parametric anisotropic curve shortening flow, we analyse a fully discrete numerical method of this geometric evolution equation. The method uses piecewise linear finite elements in space and a backward Euler approximation in time. We establish existence and uniqueness of a discrete solution, as well as an unconditional stability property. Some numerical computations confirm the theoretical results and demonstrate the practicality of our method

Level set methods for higher order evolution laws

A numerical treatment of non-linear higher-order geometric evolution equations with the level set and the finite element method is presented. The isotropic, weak anisotropic and strong anisotropic situation is discussed. Most of the equations considered in this work arise from the field of thin film growth. A short introduction to the subject is given. Four different models are discussed: mean curvature flow, surface diffusion, a kinetic model, which combines the effects of mean curvature flow and surface diffusion and includes a further kinetic component, and an adatom model, which incorporates in addition free adatoms. As an introduction to the numerical schemes, first the isotropic and weak anisotropic situation is considered. Then strong anisotropies (non-convex anisotropies) are used to simulate the phenomena of faceting and coarsening. The experimentally observed effect of corner and edge roundings is reached in the simulation through the regularization of the strong anisotropy with a higher-order curvature term. The curvature regularization leads to an increase by two in the order of the equations, which results in highly non-linear equations of up to 6th order. For the numerical solution, the equations are transformed into systems of second order equations, which are solved with a Schur complement approach. The adatom model constitutes a diffusion equation on a moving surface. An operator splitting approach is used for the numerical solution. In difference to other works, which restrict to the isotropic situation, also the anisotropic situation is discussed and solved numerically. Furthermore, a treatment of geometric evolution equations on implicitly given curved surfaces with the level set method is given. In particular, the numerical solution of surface diffusion on curved surfaces is presented. The equations are discretized in space by standard linear finite elements. For the time discretization a semi-implicit discretization scheme is employed. The derivation of the numerical schemes is presented in detail, and numerous computational results are given for the 2D and 3D situation. To keep computational costs low, the finite element grid is adaptively refined near the moving curves and surfaces resp. A redistancing algorithm based on a local Hopf-Lax formula is used. The algorithm has been extended by the authors to the 3D case. A detailed description of the algorithm in 3D is presented in this work.In der Arbeit geht es um die numerische Behandlung nicht-linearer geometrischer Evolutionsgleichungen höherer Ordnung mit Levelset- und Finite-Elemente-Verfahren. Der isotrope, schwach anisotrope und stark anisotrope Fall wird diskutiert. Die meisten in dieser Arbeit betrachteten Gleichungen entstammen dem Gebiet des Dünnschicht-Wachstums. Eine kurze Einführung in dieses Gebiet wird gegeben. Es werden vier verschiedene Modelle diskutiert: mittlerer Krümmungsfluss, Oberflächendiffusion, ein kinetisches Modell, welches die Effekte des mittleren Krümmungsflusses und der Oberflächendiffusion kombiniert und zusätzlich eine kinetische Komponente beinhaltet, und ein Adatom-Modell, welches außerdem freie Adatome berücksichtigt. Als Einführung in die numerischen Schemata, wird zuerst der isotrope und schwach anisotrope Fall betrachtet. Anschließend werden starke Anisotropien (nicht-konvexe Anisotropien) benutzt, um Facettierungs- und Vergröberungsphänomene zu simulieren. Der in Experimenten beobachtete Effekt der Ecken- und Kanten-Abrundung wird in der Simulation durch die Regularisierung der starken Anisotropie durch einen Krümmungsterm höherer Ordnung erreicht. Die Krümmungsregularisierung führt zu einer Erhöhung der Ordnung der Gleichung um zwei, was hochgradig nicht-lineare Gleichungen von bis zu sechster Ordnung ergibt. Für die numerische Lösung werden die Gleichungen auf Systeme zweiter Ordnungsgleichungen transformiert, welche mit einem Schurkomplement-Ansatz gelöst werden. Das Adatom-Modell bildet eine Diffusionsgleichung auf einer bewegten Fläche. Zur numerischen Lösung wird ein Operatorsplitting-Ansatz verwendet. Im Unterschied zu anderen Arbeiten, die sich auf den isotropen Fall beschränken, wird auch der anisotrope Fall diskutiert und numerisch gelöst. Außerdem werden geometrische Evolutionsgleichungen auf implizit gegebenen gekrümmten Flächen mit Levelset-Verfahren behandelt. Insbesondere wird die numerische Lösung von Oberflächendiffusion auf gekrümmten Flächen dargestellt. Die Gleichungen werden im Ort mit linearen Standard-Finiten-Elementen diskretisiert. Als Zeitdiskretisierung wird ein semi-implizites Diskretisierungsschema verwendet. Die Herleitung der numerischen Schemata wird detailliert dargestellt, und zahlreiche numerische Ergebnisse für den 2D und 3D Fall sind gegeben. Um den Rechenaufwand gering zu halten, wird das Finite-Elemente-Gitter adaptiv an den bewegten Kurven bzw. den bewegten Flächen verfeinert. Es wird ein Redistancing-Algorithmus basierend auf einer lokalen Hopf-Lax Formel benutzt. Der Algorithmus wurde von den Autoren auf den 3D Fall erweitert. In dieser Arbeit wird der Algorithmus für den 3D Fall detailliert beschrieben

Processing Elastic Surfaces and Related Gradient Flows

Surface processing tools and techniques have a long history in the fields of computer graphics, computer aided geometric design and engineering. In this thesis we consider variational methods and geometric evolution problems for various surface processing applications including surface fairing, surface restoration and surface matching. Geometric evolution problems are often based on the gradient flow of geometric energies. The Willmore functional, defined as the integral of the squared mean curvature over the surface, is a geometric energy that measures the deviation of a surface from a sphere. Therefore, it is a suitable functional for surface restoration, where a destroyed surface patch is replaced by a smooth patch defined as the minimizer of the Willmore functional with boundary conditions for the position and the normal at the patch boundary. However, using the Willmore functional does not lead to satisfying results if an edge or a corner of the surface is destroyed. The anisotropic Willmore energy is a natural generalization of the Willmore energy which has crystal-shaped surfaces like cubes or octahedra as minimizers. The corresponding L2-gradient flow, the anisotropic Willmore flow, leads to a fourth-order partial differential equation that can be written as a system of two coupled second second order equations. Using linear Finite Elements, we develop a semi-implicit scheme for the anisotropic Willmore flow with boundary conditions. This approach suffer from significant restrictions on the time step size. Effectively, one usually has to enforce time steps smaller than the squared spatial grid size. Based on a natural approach for the time discretization of gradient flows we present a new scheme for the time and space discretization of the isotropic and anisotropic Willmore flow. The approach is variational and takes into account an approximation of the L2-distance between the surface at the current time step and the unknown surface at the new time step as well as a fully implicity approximation of the anisotropic Willmore functional at the new time step. To evaluate the anisotropic Willmore energy on the unknown surface of the next time step, we first ask for the solution of an inner, secondary variational problem describing a time step of anisotropic mean curvature motion. The time discrete velocity deduced from the solution of the latter problem is regarded as an approximation of the anisotropic mean curvature vector and enters the approximation of the actual anisotropic Willmore functional. The resulting two step time discretization of the Willmore flow is applied to polygonal curves and triangular surfaces and is independent of the co-dimension. Various numerical examples underline the stability of the new scheme, which enables time steps of the order of the spatial grid size. The Willmore functional of a surface is referred to as the elastic surface energy. Another interesting application of modeling elastic surfaces as minimizers of elastic energies is surface matching, where a correspondence between two surfaces is subject of investigation. There, we seek a mapping between two surfaces respecting certain properties of the surfaces. The approach is variational and based on well-established matching methods from image processing in the parameter domains of the surfaces instead of finding a correspondence between the two surfaces directly in 3D. Besides the appropriate modeling we analyze the derived model theoretically. The resulting deformations are globally smooth, one-to-one mappings. A physically proper morphing of characters in computer graphic is capable with the resulting computational approach

An extension of min/max flow framework

In this paper, the min/max flow scheme for image restoration is revised. The novelty consists of the fol- 24 lowing three parts. The first is to analyze the reason of the speckle generation and then to modify the 25 original scheme. The second is to point out that the continued application of this scheme cannot result 26 in an adaptive stopping of the curvature flow. This is followed by modifications of the original scheme 27 through the introduction of the Gradient Vector Flow (GVF) field and the zero-crossing detector, so as 28 to control the smoothing effect. Our experimental results with image restoration show that the proposed 29 schemes can reach a steady state solution while preserving the essential structures of objects. The third is 30 to extend the min/max flow scheme to deal with the boundary leaking problem, which is indeed an 31 intrinsic shortcoming of the familiar geodesic active contour model. The min/max flow framework pro- 32 vides us with an effective way to approximate the optimal solution. From an implementation point of 33 view, this extended scheme makes the speed function simpler and more flexible. The experimental 34 results of segmentation and region tracking show that the boundary leaking problem can be effectively 35 suppressed