Quality criteria benchmark for hyperspectral imagery

Hyperspectral data appear to be of a growing interest over the past few years. However, applications for hyperspectral data are still in their infancy as handling the significant size of the data presents a challenge for the user community. Efficient compression techniques are required, and lossy compression, specifically, will have a role to play, provided its impact on remote sensing applications remains insignificant. To assess the data quality, suitable distortion measures relevant to end-user applications are required. Quality criteria are also of a major interest for the conception and development of new sensors to define their requirements and specifications. This paper proposes a method to evaluate quality criteria in the context of hyperspectral images. The purpose is to provide quality criteria relevant to the impact of degradations on several classification applications. Different quality criteria are considered. Some are traditionnally used in image and video coding and are adapted here to hyperspectral images. Others are specific to hyperspectral data.We also propose the adaptation of two advanced criteria in the presence of different simulated degradations on AVIRIS hyperspectral images. Finally, five criteria are selected to give an accurate representation of the nature and the level of the degradation affecting hyperspectral data

Hyperspectral Imaging for Peach Ripening Assessment

The present research is focused on the application of artificial vision to peach ripening assessment, avoiding multiplicative and additive effect. Original images were acquired with a hyperspectral camera. Vision allows a spatially detailed determination of the ripening stage of the fruit. Optical indexes are proposed, based on the combination of wavelengths close to the chlorophyll absorption peak at 680 nm. Ind1 corresponds approximately to the depth of the absorption peak, and Ind2 corresponds to the relative absorption peak. An artificial image of each index was obtained by computing the corresponding reflectance images. Score images have been also computed from Principal Components and Partial Least Squares Analysis. In any case the best performances correspond to such images that correct multiplicative and additive effects. Ind2 is the preferred index; it showed the highest discriminating power between ripening stages and no influence of convexity. Ind2 also allowed the differentiation of ripening regions within the fruits, and it showed the evolution of those regions during ripening. This fact has been also observed in some of the score image

Colour image processing and texture analysis on images of porterhouse steak meat

This paper outlines two colour image processing and texture analysis techniques applied to meat images and assessment of error due to the use of JPEG compression at image capture. JPEG error analysis was performed by capturing TIFF and JPEG images, then calculating the RMS difference and applying a calibration between block boundary features and subjective visual JPEG scores. Both scores indicated high JPEG quality. Correction of JPEG blocking error was trialled and found to produce minimal improvement in the RMS difference. The texture analysis methods used were singular value decomposition over pixel blocks and complex cell analysis. The block singular values were classified as meat or non- meat by Fisher linear discriminant analysis with the colour image processing result used as ‘truth.’ Using receiver operator characteristic (ROC) analysis, an area under the ROC curve of 0.996 was obtained, demonstrating good correspondence between the colour image processing and the singular values. The complex cell analysis indicated a ‘texture angle’ expected from human inspection

Multispectral and Hyperspectral Image Fusion by MS/HS Fusion Net

Hyperspectral imaging can help better understand the characteristics of different materials, compared with traditional image systems. However, only high-resolution multispectral (HrMS) and low-resolution hyperspectral (LrHS) images can generally be captured at video rate in practice. In this paper, we propose a model-based deep learning approach for merging an HrMS and LrHS images to generate a high-resolution hyperspectral (HrHS) image. In specific, we construct a novel MS/HS fusion model which takes the observation models of low-resolution images and the low-rankness knowledge along the spectral mode of HrHS image into consideration. Then we design an iterative algorithm to solve the model by exploiting the proximal gradient method. And then, by unfolding the designed algorithm, we construct a deep network, called MS/HS Fusion Net, with learning the proximal operators and model parameters by convolutional neural networks. Experimental results on simulated and real data substantiate the superiority of our method both visually and quantitatively as compared with state-of-the-art methods along this line of research.Comment: 10 pages, 7 figure

Method for coregistration of optical measurements of breast tissue with histopathology : the importance of accounting for tissue deformations

For the validation of optical diagnostic technologies, experimental results need to be benchmarked against the gold standard. Currently, the gold standard for tissue characterization is assessment of hematoxylin and eosin (H&E)-stained sections by a pathologist. When processing tissue into H&E sections, the shape of the tissue deforms with respect to the initial shape when it was optically measured. We demonstrate the importance of accounting for these tissue deformations when correlating optical measurement with routinely acquired histopathology. We propose a method to register the tissue in the H&E sections to the optical measurements, which corrects for these tissue deformations. We compare the registered H&E sections to H&E sections that were registered with an algorithm that does not account for tissue deformations by evaluating both the shape and the composition of the tissue and using microcomputer tomography data as an independent measure. The proposed method, which did account for tissue deformations, was more accurate than the method that did not account for tissue deformations. These results emphasize the need for a registration method that accounts for tissue deformations, such as the method presented in this study, which can aid in validating optical techniques for clinical use. (C) The Authors. Published by SPIE under a Creative Commons Attribution 4.0 Unported License

Unmanned Aerial Vehicles (UAVs) in environmental biology: A Review

Acquiring information about the environment is a key step during each study in the field of environmental biology at different levels, from an individual species to community and biome. However, obtaining information about the environment is frequently difficult because of, for example, the phenological timing, spatial distribution of a species or limited accessibility of a particular area for the field survey. Moreover, remote sensing technology, which enables the observation of the Earth’s surface and is currently very common in environmental research, has many limitations such as insufficient spatial, spectral and temporal resolution and a high cost of data acquisition. Since the 1990s, researchers have been exploring the potential of different types of unmanned aerial vehicles (UAVs) for monitoring Earth’s surface. The present study reviews recent scientific literature dealing with the use of UAV in environmental biology. Amongst numerous papers, short communications and conference abstracts, we selected 110 original studies of how UAVs can be used in environmental biology and which organisms can be studied in this manner. Most of these studies concerned the use of UAV to measure the vegetation parameters such as crown height, volume, number of individuals (14 studies) and quantification of the spatio-temporal dynamics of vegetation changes (12 studies). UAVs were also frequently applied to count birds and mammals, especially those living in the water. Generally, the analytical part of the present study was divided into following sections: (1) detecting, assessing and predicting threats on vegetation, (2) measuring the biophysical parameters of vegetation, (3) quantifying the dynamics of changes in plants and habitats and (4) population and behaviour studies of animals. At the end, we also synthesised all the information showing, amongst others, the advances in environmental biology because of UAV application. Considering that 33% of studies found and included in this review were published in 2017 and 2018, it is expected that the number and variety of applications of UAVs in environmental biology will increase in the future