1,627 research outputs found
Simulation of Laser Propagation in a Plasma with a Frequency Wave Equation
The aim of this work is to perform numerical simulations of the propagation
of a laser in a plasma. At each time step, one has to solve a Helmholtz
equation in a domain which consists in some hundreds of millions of cells. To
solve this huge linear system, one uses a iterative Krylov method with a
preconditioning by a separable matrix. The corresponding linear system is
solved with a block cyclic reduction method. Some enlightments on the parallel
implementation are also given. Lastly, numerical results are presented
including some features concerning the scalability of the numerical method on a
parallel architecture
On the impact of communication complexity in the design of parallel numerical algorithms
This paper describes two models of the cost of data movement in parallel numerical algorithms. One model is a generalization of an approach due to Hockney, and is suitable for shared memory multiprocessors where each processor has vector capabilities. The other model is applicable to highly parallel nonshared memory MIMD systems. In the second model, algorithm performance is characterized in terms of the communication network design. Techniques used in VLSI complexity theory are also brought in, and algorithm independent upper bounds on system performance are derived for several problems that are important to scientific computation
Numerically Stable Recurrence Relations for the Communication Hiding Pipelined Conjugate Gradient Method
Pipelined Krylov subspace methods (also referred to as communication-hiding
methods) have been proposed in the literature as a scalable alternative to
classic Krylov subspace algorithms for iteratively computing the solution to a
large linear system in parallel. For symmetric and positive definite system
matrices the pipelined Conjugate Gradient method outperforms its classic
Conjugate Gradient counterpart on large scale distributed memory hardware by
overlapping global communication with essential computations like the
matrix-vector product, thus hiding global communication. A well-known drawback
of the pipelining technique is the (possibly significant) loss of numerical
stability. In this work a numerically stable variant of the pipelined Conjugate
Gradient algorithm is presented that avoids the propagation of local rounding
errors in the finite precision recurrence relations that construct the Krylov
subspace basis. The multi-term recurrence relation for the basis vector is
replaced by two-term recurrences, improving stability without increasing the
overall computational cost of the algorithm. The proposed modification ensures
that the pipelined Conjugate Gradient method is able to attain a highly
accurate solution independently of the pipeline length. Numerical experiments
demonstrate a combination of excellent parallel performance and improved
maximal attainable accuracy for the new pipelined Conjugate Gradient algorithm.
This work thus resolves one of the major practical restrictions for the
useability of pipelined Krylov subspace methods.Comment: 15 pages, 5 figures, 1 table, 2 algorithm
BCYCLIC: A parallel block tridiagonal matrix cyclic solver
13 pages, 6 figures.A block tridiagonal matrix is factored with minimal fill-in using a cyclic reduction algorithm that is easily parallelized. Storage of the factored blocks allows the application of the inverse to multiple right-hand sides which may not be known at factorization time. Scalability with the number of block rows is achieved with cyclic reduction, while scalability with the block size is achieved using multithreaded routines (OpenMP, GotoBLAS) for block matrix manipulation. This dual scalability is a noteworthy feature of this new solver, as well as its ability to efficiently handle arbitrary (non-powers-of-2) block row and processor numbers. Comparison with a state-of-the art parallel sparse solver is presented. It is expected that this new solver will allow many physical applications to optimally use the parallel resources on current supercomputers. Example usage of the solver in magneto-hydrodynamic (MHD), three-dimensional equilibrium solvers for high-temperature fusion plasmas is cited.This research has been sponsored by the US Department of Energy under Contract DE-AC05-00OR22725 with UT-Battelle, LLC. This research used resources of the National Center for Computational Sciences at Oak Ridge National Laboratory, which is supported by the Office of Science of the Department of Energy under Contract DE-AC05-00OR22725.Publicad
High performance numerical modeling of ultra-short laser pulse propagation based on multithreaded parallel hardware
The focus of this study is development of parallelised version of severely sequential and iterative numerical algorithms based on multi-threaded parallel platform such as a graphics processing unit. This requires design and development of a platform-specific numerical solution that can benefit from the parallel capabilities of the chosen platform. Graphics processing unit was chosen as a parallel platform for design and development of a numerical solution for a specific physical model in non-linear optics. This problem appears in describing ultra-short pulse propagation in bulk transparent media that has recently been subject to several theoretical and numerical studies. The mathematical model describing this phenomenon is a challenging and complex problem and its numerical modeling limited on current modern workstations. Numerical modeling of this problem requires a parallelisation of an essentially serial algorithms and elimination of numerical bottlenecks. The main challenge to overcome is parallelisation of the globally non-local mathematical model. This thesis presents a numerical solution for elimination of numerical bottleneck associated with the non-local nature of the mathematical model. The accuracy and performance of the parallel code is identified by back-to-back testing with a similar serial version
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