Multidisciplinary Applications of Detached-Eddy Simulation to Separated Flows at High Reynolds Numbers

We focus on multidisciplinary applications of detached-eddy simulation (DES), principally flight mechanics and aeroelasticity. Specifically, the lateral instability (known as abrupt wing stall) of the preproduction F/A-18E is reproduced using DES, including the unsteady shock motion. The presence of low frequency pressure oscillations due to shock motion in the current simulations and the experiments motivated a full aircraft calculation, which showed low frequency high-magnitude rolling moments that could be a significant contributor to the abrupt wing stall phenomenon. DES is also applied to the F-18 high angle of attack research vehicle (HARV) at a moderate angle of attack to reproduce the vortex breakdown leading to vertical stabilizer buffet. Unsteady tail loads are compared to flight test data. This work lays the foundation for future deforming grid calculations to reproduce the aero-elastic tail buffet seen in flight test. Solution based grid adaption is used on unstructured grids in both cases to improve the resolution in the separated region. Previous DoD Challenge work has demonstrated the unique ability of the DES turbulence treatment to accurately and efficiently predict flows with massive separation at flight Reynolds numbers. DES calculations have been performed using the Cobalt code and on unstructured grids, an approach that can deal with complete configurations with very few compromises. A broad range of flows has been examined in previous Challenge work, including aircraft forebodies, airfoil sections, a missile afterbody, vortex breakdown on a delta wing, and the F-16 and F-15E at high angles-of-attack. All DES predictions exhibited a moderate to significant improvement over results obtained using traditional Reynolds-averaged models and often excellent agreement with experimental/flight-test data. DES combines the efficiency of a Reynolds-averaged turbulence model near the wall with the fidelity of Large-Eddy Simulation (LES) in separated regions. Since it uses Large-Eddy Simulation in the separated regions, it is capable of predicting the unsteady motions associated with separated flows. The development and demonstration of improved methods for the prediction of flight mechanics and aeroelasticity in this Challenge is expected to reduce the acquisition cost of future military aircraft

Determining the extragalactic extinction law with SALT

We present CCD imaging observations of early-type galaxies with dark lanes obtained with the Southern African Large Telescope (SALT) during its performance-verification phase. We derive the extinction law by the extragalactic dust in the dark lanes in the spectral range 1.11mu m^{-1} < lambda^{-1} < 2.94 mu m^{-1} by fitting model galaxies to the unextinguished parts of the image, and subtracting from these the actual images. We find that the extinction curves run parallel to the Galactic extinction curve, which implies that the properties of dust in the extragalactic enviroment are similar to those of the Milky Way. The ratio of the total V band extinction to the selective extinction between the V and B bands is derived for each galaxy with an average of 2.82+-0.38, compared to a canonical value of 3.1 for the Milky Way. The similar values imply that galaxies with well-defined dark lanes have characteristic dust grain sizes similar to those of Galactic dust.Comment: 20 pages, 15 figures and 4 tables. Accepted for publication in MNRA

SPITZER survey of dust grain processing in stable discs around binary post-AGB stars

Aims: We investigate the mineralogy and dust processing in the circumbinary discs of binary post-AGB stars using high-resolution TIMMI2 and SPITZER infrared spectra. Methods: We perform a full spectral fitting to the infrared spectra using the most recent opacities of amorphous and crystalline dust species. This allows for the identification of the carriers of the different emission bands. Our fits also constrain the physical properties of different dust species and grain sizes responsible for the observed emission features. Results: In all stars the dust is oxygen-rich: amorphous and crystalline silicate dust species prevail and no features of a carbon-rich component can be found, the exception being EPLyr, where a mixed chemistry of both oxygen- and carbon-rich species is found. Our full spectral fitting indicates a high degree of dust grain processing. The mineralogy of our sample stars shows that the dust is constituted of irregularly shaped and relatively large grains, with typical grain sizes larger than 2 micron. The spectra of nearly all stars show a high degree of crystallinity, where magnesium-rich end members of olivine and pyroxene silicates dominate. Other dust features of e.g. silica or alumina are not present at detectable levels. Temperature estimates from our fitting routine show that a significant fraction of grains must be cool, significantly cooler than the glass temperature. This shows that radial mixing is very efficient is these discs and/or indicates different thermal conditions at grain formation. Our results show that strong grain processing is not limited to young stellar objects and that the physical processes occurring in the discs are very similar to those in protoplanetary discs.Comment: 22pages, 50 figures (in appendix), accepted for A&

Quantitative analysis of WC stars: Constraints on neon abundances from ISO/SWS spectroscopy

Neon abundances are derived in four Galactic WC stars -- gamma Vel (WR11, WC8+O7.5III), HD156385 (WR90, WC7), HD192103 (WR135, WC8), and WR146 (WC5+O8) - using mid-infrared fine structure lines obtained with ISO/SWS. Stellar parameters for each star are derived using a non-LTE model atmospheric code (Hillier & Miller 1998) together with ultraviolet (IUE), optical (INT, AAT) and infrared (UKIRT, ISO) spectroscopy. In the case of gamma Vel, we adopt results from De Marco et al. (2000), who followed an identical approach. ISO/SWS datasets reveal the [NeIII] 15.5um line in each of our targets, while [NeII] 12.8um, [SIV] 10.5um and [SIII] 18.7um are observed solely in gamma Vel. Using a method updated from Barlow et al. (1988) to account for clumped winds, we derive Ne/He=3-4x10^-3 by number, plus S/He=6x10^-5 for gamma Vel. Neon is highly enriched, such that Ne/S in gamma Vel is eight times higher than cosmic values. However, observed Ne/He ratios are a factor of two times lower than predictions of current evolutionary models of massive stars. An imprecise mass-loss and distance were responsible for the much greater discrepancy in neon content identified by Barlow et al. Our sample of WC5--8 stars span a narrow range in T* (=55--71kK), with no trend towards higher temperature at earlier spectral type, supporting earlier results for a larger sample by Koesterke & Hamann (1995). Stellar luminosities range from 100,000 to 500,000 Lo, while 10^-5.1 < Mdot/(Mo/yr) < 10^-4.5, adopting clumped winds, in which volume filling factors are 10%. In all cases, wind performance numbers are less than 10, significantly lower than recent estimates. Carbon abundances span 0.08 < C/He < 0.25 by number, while oxygen abundances remain poorly constrained.Comment: 16 pages,7 figures accepted for MNRA

Paternal obesity is associated with IGF2 hypomethylation in newborns: results from a Newborn Epigenetics Study (NEST) cohort

Data from epidemiological and animal model studies suggest that nutrition during pregnancy may affect the health status of subsequent generations. These transgenerational effects are now being explained by disruptions at the level of the epigenetic machinery. Besides in vitro environmental exposures, the possible impact on the reprogramming of methylation profiles at imprinted genes at a much earlier time point, such as during spermatogenesis or oogenesis, has not previously been considered. In this study, our aim was to determine associations between preconceptional obesity and DNA methylation profiles in the offspring, particularly at the differentially methylated regions (DMRs) of the imprinted Insulin-like Growth Factor 2 (IGF2) gene

Adaptive Optics Integral Field Spectroscopy of the Young Stellar Objects in LkH_alpha 225

Progress in understanding the embedded stars in LkHa225 has been hampered by their variability, making it hard to compare data taken at different times, and by the limited resolution of the available data, which cannot probe the small scales between the two stars. In an attempt to overcome these difficulties, we present new near-infrared data on this object taken using the ALFA adaptive optics system with the MPE 3D integral field spectrometer and the near-infrared camera Omega-Cass. The stars themselves have K-band spectra which are dominated by warm dust emission, analagous to class I-II for low mass YSOs, suggesting that the stars are in a phase where they are still accreting matter. On the other hand, the ridge of continuum emission between them is rather bluer, suggestive of extincted and/or scattered stellar light rather than direct dust emission. The compactness of the CO emission seen toward each star argues for accretion disks (which can also account for much of the K-band veiling) rather than a neutral wind. In contrast to other YSOs with CO emission, LkHa225 has no detectable Br_gamma emission. Additionally there is no H_2 detected on the northern star, although we do confirm that the strongest H_2 emission is on the southern star, where we find it is excited primarily by thermal mechanisms. A second knot of H_2 is observed to its northeast, with a velocity shift of -75kms and a higher fraction of non-thermal emission. This is discussed with reference to the H2O maser, the molecular outflow, and [S II] emission observed between the stars.Comment: to appear in ApJ, April 2001. 18 pages, including 6 figure

Genetic and epigenetic alterations on the short arm of chromosome 11 are involved in a majority of sporadic Wilms' tumours

Wilms' tumour is one of the most common solid tumours of childhood. 11p13 (WT1 locus) and 11p15.5 (WT2 locus) are known to have genetic or epigenetic aberrations in these tumours. In Wilms' tumours, mutation of the Wilms tumour 1 (WT1) gene at the WT1 locus has been reported, and the WT2 locus, comprising the two independent imprinted domains IGF2/H19 and KIP2/LIT1, can undergo maternal deletion or alterations associated with imprinting. Although these alterations have been identified in many studies, it is still not clear how frequently combined genetic and epigenetic alterations of these loci are involved in Wilms' tumours or how these alterations occur. To answer both questions, we performed genetic and epigenetic analyses of these loci, together with an additional gene, CTNNB1, in 35 sporadic Wilms' tumours. Loss of heterozygosity of 11p15.5 and loss of imprinting of IGF2 were the most frequent genetic (29%) and epigenetic (40%) alterations in Wilms' tumours, respectively. In total, 83% of the tumours had at least one alteration at 11p15.5 and/or 11p13. One-third of the tumours had alterations at multiple loci. Our results suggest that chromosome 11p is not only genetically but also epigenetically critical for the majority of Wilms' tumours

Loss of heterozygosity at chromosome 1p in different solid human tumours: association with survival

The distal half of chromosome 1p was analysed with 15 polymorphic microsatellite markers in 683 human solid tumours at different locations. Loss of heterozygosity (LOH) was observed at least at one site in 369 cases or 54% of the tumours. LOHs detected ranged from 30–64%, depending on tumour location. The major results regarding LOH at different tumour locations were as follows: stomach, 20/38 (53%); colon and rectum, 60/109 (55%); lung, 38/63 (60%); breast, 145/238 (61%); endometrium, 18/25 (72%); ovary, 17/31 (55%); testis, 11/30 (37%); kidney, 22/73 (30%); thyroid, 4/14 (29%); and sarcomas, 9/14 (64%). High percentages of LOH were seen in the 1p36.3, 1p36.1, 1p35–p34.3, 1p32 and 1p31 regions, suggesting the presence of tumour-suppressor genes. All these regions on chromosome 1p show high LOH in more than one tumour type. However, distinct patterns of LOH were detected at different tumour locations. There was a significant separation of survival curves, with and without LOH at chromosome 1p, in the breast cancer patients. Multivariate analysis showed that LOH at 1p in breast tumours is a better indicator for prognosis than the other variables tested in our model, including nodal metastasis. © 1999 Cancer Research Campaig

Loss of imprinting of IGF2 correlates with hypermethylation of the H19 differentially methylated region in hepatoblastoma

IGF2, a maternally imprinted foetal growth factor gene, is implicated in many childhood tumours including hepatoblastoma (HB); however, the genetic and epigenetic alterations have not comprehensively been studied. We analysed the methylation status of the H19 differentially methylated region (DMR), loss of heterozygosity (LOH) and allelic expression of IGF2 in 54 HB tumours, and found that 12 tumours (22%) with LOH, 9 (17%) with loss of imprinting (LOI) and 33 (61%) with retention of imprinting (ROI). Biallelic and monoallelic IGF2 expressions correlated with hypermethylation and normal methylation of H19 DMR, respectively, in two tumours with LOI and seven tumours with ROI. Quantitative RT–PCR analysis showed minimal expression of H19 mRNA and substantial expression of IGF2 mRNA in tumours with LOH or LOI, and substantial expression of both H19 and IGF2 mRNAs in tumours with ROI. Increased IGF2 expression with predominant embryonic P3 transcript was found in the majority of HBs with ROI and foetal livers. In contrast to the earlier reports, our findings suggest that the disruption of the enhancer competition model reported in Wilms' tumour may also occur in HB. Both frequencies of LOH and LOI seem to be lower in HB than in Wilms' tumour, reflecting the different tissue origins