Multi-objective calibration of a surface water-groundwater flow model in an irrigated agricultural region: Yaqui Valley, Sonora, Mexico

Multi-objective optimization was used to calibrate a regional surface water-groundwater model of the Yaqui Valley, a 6800 km² irrigated agricultural region located along the Sea of Cortez in Sonora, Mexico. The model simulates three-dimensional groundwater flow coupled to one-dimensional surface water flow in the irrigation canals. It accounts for the spatial distribution of annual recharge from irrigation, subsurface drainage, agricultural pumping, and irrigation canal seepage. The main advantage of the calibration method is that it accounts for both parameter and model structural uncertainty. In this case, results show that the effect of including the process of bare soil evaporation is significantly greater than the effects of parameter uncertainty. Furthermore, by treating the different objectives independently, a better identification of the model parameters is achieved compared to a single-objective approach, since the various objectives are sensitive to different parameters. The simulated water balance shows that 15&ndash;20% of the water that enters the irrigation canals is lost by seepage to groundwater. The main discharge mechanisms in the Valley are crop evapotranspiration (53%), non-agricultural evapotranspiration and bare soil evaporation (19%), surface drainage to the Sea of Cortez (15%), and groundwater pumping (9%). In comparison, groundwater discharge to the estuary was relatively insignificant (less than 1%). The model was further refined by identifying zonal <i>K_v</i> and <i>K_h</i> values based on a spatial analysis of the model residuals

Experimental investigations for trapping oxygen gas in saturated porous media for in situ bioremediation

Oxygen is often the rate-limiting factor in aerobic in situ bioremediation. This paper investigates the degree to which air or oxygen gas can be emplaced into the pore space of saturated porous media and provide a significant mass of oxygen. Column experiments were performed to test three emplacement methods: direct gas injection, injection of water supersaturated with gas, and injection of a hydrogen peroxide solution. The direct gas injection method fills 14–17% of the pore space with trapped gas. Water supersaturated with gas fills 18–27% of the pore space with a trapped gas phase, and hydrogen peroxide solution injections emplaces trapped gas in 17–55% of the pore space. In addition to supplying oxygen, gas entrapment causes a decrease in hydraulic conductivity which could be an advantage by decreasing the flow of contaminants offsite. The relative hydraulic conductivity of porous media with a trapped gas volume of 14–55% was 0.62–0.05.Keywords: Hydrology: Groundwater hydrology, Hydrology: Groundwater qualityKeywords: Hydrology: Groundwater hydrology, Hydrology: Groundwater qualit

Forest degradation drives widespread avian habitat and population declines

In many regions of the world, forest management has reduced old forest and simplified forest structure and composition. We hypothesized that such forest degradation has resulted in long-term habitat loss for forest-associated bird species of eastern Canada (130,017 km2) which, in turn, has caused bird-population declines. Despite little change in overall forest cover, we found substantial reductions in old forest as a result of frequent clear-cutting and a broad-scale transformation to intensified forestry. Back-cast species distribution models revealed that breeding habitat loss occurred for 66% of the 54 most common species from 1985 to 2020 and was strongly associated with reduction in old age classes. Using a long-term, independent dataset, we found that habitat amount predicted population size for 94% of species, and habitat loss was associated with population declines for old-forest species. Forest degradation may therefore be a primary cause of biodiversity decline in managed forest landscapes

Radiation Performance of 1 Gbit DDR SDRAMs Fabricated in the 90 nm CMOS Technology Node

We present Single Event Effect (SEE) and Total Ionizing Dose (TID) data for 1 Gbit DDR SDRAMs (90 nm CMOS technology) as well as comparing this data with earlier technology nodes from the same manufacturer

Aspirin and extended-release dipyridamole versus clopidogrel for recurrent stroke

Background Recurrent stroke is a frequent, disabling event after ischemic stroke. This study compared the efficacy and safety of two antiplatelet regimens — aspirin plus extendedrelease dipyridamole (ASA–ERDP) versus clopidogrel. Methods In this double-blind, 2-by-2 factorial trial, we randomly assigned patients to receive 25 mg of aspirin plus 200 mg of extended-release dipyridamole twice daily or to receive 75 mg of clopidogrel daily. The primary outcome was first recurrence of stroke. The secondary outcome was a composite of stroke, myocardial infarction, or death from vascular causes. Sequential statistical testing of noninferiority (margin of 1.075), followed by superiority testing, was planned. Results A total of 20,332 patients were followed for a mean of 2.5 years. Recurrent stroke occurred in 916 patients (9.0%) receiving ASA–ERDP and in 898 patients (8.8%) receiving clopidogrel (hazard ratio, 1.01; 95% confidence interval [CI], 0.92 to 1.11). The secondary outcome occurred in 1333 patients (13.1%) in each group (hazard ratio for ASA–ERDP, 0.99; 95% CI, 0.92 to 1.07). There were more major hemorrhagic events among ASA–ERDP recipients (419 [4.1%]) than among clopidogrel recipients (365 [3.6%]) (hazard ratio, 1.15; 95% CI, 1.00 to 1.32), including intracranial hemorrhage (hazard ratio, 1.42; 95% CI, 1.11 to 1.83). The net risk of recurrent stroke or major hemorrhagic event was similar in the two groups (1194 ASA–ERDP recipients [11.7%], vs. 1156 clopidogrel recipients [11.4%]; hazard ratio, 1.03; 95% CI, 0.95 to 1.11). Conclusions The trial did not meet the predefined criteria for noninferiority but showed similar rates of recurrent stroke with ASA–ERDP and with clopidogrel. There is no evidence that either of the two treatments was superior to the other in the prevention of recurrent stroke. (ClinicalTrials.gov number, NCT00153062.

Urinary ATP as an indicator of infection and inflammation of the urinary tract in patients with lower urinary tract symptoms

BACKGROUND: Adenosine-5'-triphosphate (ATP) is a neurotransmitter and inflammatory cytokine implicated in the pathophysiology of lower urinary tract disease. ATP additionally reflects microbial biomass thus has potential as a surrogate marker of urinary tract infection (UTI). The optimum clinical sampling method for ATP urinalysis has not been established. We tested the potential of urinary ATP in the assessment of lower urinary tract symptoms, infection and inflammation, and validated sampling methods for clinical practice. METHODS: A prospective, blinded, cross-sectional observational study of adult patients presenting with lower urinary tract symptoms (LUTS) and asymptomatic controls, was conducted between October 2009 and October 2012. Urinary ATP was assayed by a luciferin-luciferase method, pyuria counted by microscopy of fresh unspun urine and symptoms assessed using validated questionnaires. The sample collection, storage and processing methods were also validated. RESULTS: 75 controls and 340 patients with LUTS were grouped as without pyuria (n = 100), pyuria 1-9 wbc ?l(-1) (n = 120) and pyuria ?10 wbc ?l(-1) (n = 120). Urinary ATP was higher in association with female gender, voiding symptoms, pyuria greater than 10 wbc ?l(-1) and negative MSU culture. ROC curve analysis showed no evidence of diagnostic test potential. The urinary ATP signal decayed with storage at 23°C but was prevented by immediate freezing at ??-20°C, without boric acid preservative and without the need to centrifuge urine prior to freezing. CONCLUSIONS: Urinary ATP may have a role as a research tool but is unconvincing as a surrogate, clinical diagnostic marker

Beam-induced damage on diffractive hard X-ray optics

Beam-induced damage on diffractive hard X-ray optics is studied by means of X-ray diffraction and scanning electron microscopy

Incretin-Based Therapies for the Treatment of Type 2 Diabetes: Evaluation of the Risks and Benefits

Limited evidence suggests that GLP-I may also preserve ventricular function and improve outcomes in human subjects with heart failure or myocardial infarction (11,12). [...] both exenatide and liraglutide reduce blood pressure, body weight, and plasma lipid profiles in subjects with type 2 diabetes (13), raising the hope that longterm treatment with these agents may reduce the incidence of cardiovascular events.\n However, two safety issues have been raised - pancreatitis and medullary carcinoma of the thyroid

An Immature Retroviral RNA Genome Resembles a Kinetically Trapped Intermediate State

Retroviral virions initially assemble in an immature form that differs from that of the mature infectious particle. The RNA genomes in both immature and infectious particles are dimers, and interactions between the RNA dimer and the viral Gag protein ensure selective packaging into nascent immature virions. We used high-sensitivity selective 2′-hydroxyl acylation analyzed by primer extension (SHAPE) to obtain nucleotide-resolution structural information from scarce, femtomole quantities of Moloney murine leukemia virus (MuLV) RNA inside authentic virions and from viral RNA extracted from immature (protease-minus) virions. Our secondary structure model of the dimerization and packaging domain indicated that a stable intermolecular duplex known as PAL2, previously shown to be present in mature infectious MuLV particles, was sequestered in an alternate stem-loop structure inside immature virions. The intermediate state corresponded closely to a late-folding intermediate that we detected in time-resolved studies of the free MuLV RNA, suggesting that the immature RNA structure reflects trapping of the intermediate folding state by interactions in the immature virion. We propose models for the RNA-protein interactions that trap the RNA in the immature state and for the conformational rearrangement that occurs during maturation of virion particles