Behind taxonomic variability: The functional redundancy in the tick microbiome

The taxonomic composition and diversity of tick midgut microbiota have been extensively studied in different species of the genera Rhipicephalus, Ixodes, Amblyomma, Haemaphysalis, Hyalomma, Dermacentor, Argas and Ornithodoros, while the functional significance of bacterial diversity has been proportionally less explored. In this study, we used previously published 16S amplicon sequence data sets from three Ixodes scapularis cohorts, two of uninfected nymphs, and one of larvae experimentally infected with Borrelia burgdorferi, to test the functional redundancy of the tick microbiome. We predicted the metabolic profiling of each sample using the state-of-the-art metagenomics tool PICRUSt2. The results showed that the microbiomes of all I. scapularis samples share only 80 taxa (24.6%, total 324), while out of the 342 metabolic pathways predicted, 82.7%, were shared by all the ticks. Borrelia-infected larvae lack 15.4% of pathways found in the microbiome of uninfected nymphs. Taxa contribution analysis showed that the functional microbiome of uninfected ticks was highly redundant, with, in some cases, up to 198 bacterial taxa contributing to a single pathway. However, Borrelia-infected larvae had a smaller redundancy with 6.7% of pathways provided by more than 100 genera, while 15.7–19.2% of pathways were provided by more than 100 genera in the two cohorts of uninfected ticks. In addition, we compared the functional profiles of three microbial communities from each data set, identified through a network-based approach, and we observed functional similarity between them. Based on the functional redundancy and functional similarity of the microbiome of ticks in different developmental stages and infection status, we concluded that the tick gut microbiota is a self-regulating community of very diverse bacteria contributing to a defined set of metabolic pathways and functions with yet unexplored relevance for tick fitness and/or bacterial community stability. We propose a change of focus in which the tick microbiome must be analyzed in all dimensions, highlighting their functional traits, instead of the conventional taxonomic profiling

Interactions between tick and transmitted pathogens evolved to minimise competition through nested and coherent networks

Natural foci of ticks, pathogens, and vertebrate reservoirs display complex relationships that are key to the circulation of pathogens and infection dynamics through the landscape. However, knowledge of the interaction networks involved in transmission of tick-borne pathogens are limited because empirical studies are commonly incomplete or performed at small spatial scales. Here, we applied the methodology of ecological networks to quantify >14, 000 interactions among ticks, vertebrates, and pathogens in the western Palearctic. These natural networks are highly structured, modular, coherent, and nested to some degree. We found that the large number of vertebrates in the network contributes to its robustness and persistence. Its structure reduces interspecific competition and allows ample but modular circulation of transmitted pathogens among vertebrates. Accounting for domesticated hosts collapses the network'' s modular structure, linking groups of hosts that were previously unconnected and increasing the circulation of pathogens. This framework indicates that ticks and vertebrates interact along the shared environmental gradient, while pathogens are linked to groups of phylogenetically close reservoirs

Nested coevolutionary networks shape the ecological relationships of ticks, hosts, and the Lyme disease bacteria of the Borrelia burgdorferi (s.l.) complex

Background: The bacteria of the Borrelia burgdorferi (s.l.) (BBG) complex constitute a group of tick-transmitted pathogens that are linked to many vertebrate and tick species. The ecological relationships between the pathogens, the ticks and the vertebrate carriers have not been analysed. The aim of this study was to quantitatively analyse these interactions by creating a network based on a large dataset of associations. Specifically, we examined the relative positions of partners in the network, the phylogenetic diversity of the tick''s hosts and its impact on BBG circulation. The secondary aim was to evaluate the segregation of BBG strains in different vectors and reservoirs. Results: BBG circulates through a nested recursive network of ticks and vertebrates that delineate closed clusters. Each cluster contains generalist ticks with high values of centrality as well as specialist ticks that originate nested sub-networks and that link secondary vertebrates to the cluster. These results highlighted the importance of host phylogenetic diversity for ticks in the circulation of BBG, as this diversity was correlated with high centrality values for the ticks. The ticks and BBG species in each cluster were not significantly associated with specific branches of the phylogeny of host genera (R 2 = 0.156, P = 0.784 for BBG; R 2 = 0.299, P = 0.699 for ticks). A few host genera had higher centrality values and thus higher importance for BBG circulation. However, the combined contribution of hosts with low centrality values could maintain active BBG foci. The results suggested that ticks do not share strains of BBG, which were highly segregated among sympatric species of ticks. Conclusions: We conclude that BBG circulation is supported by a highly redundant network. This network includes ticks with high centrality values and high host phylogenetic diversity as well as ticks with low centrality values. This promotes ecological sub-networks and reflects the high resilience of BBG circulation. The functional redundancy in BBG circulation reduces disturbances due to the removal of vertebrates as it allows ticks to fill other biotic niches

NMO in pediatric patients: brain involvement and clinical expression

Abstract Objective: To analyze the clinical, neuroimaging characteristics and positivity of the acquaporin water channel (NMO-IgG) in pediatric patients with neuromyelitis optica (NMO). This disorder could have a variable clinical expression. To address such variability, the term NMO spectrum has been suggested. Method: We evaluated six pediatric patients, with a median age of 11 years at the time of the study, with the diagnosis of NMO by the Wingerchuck criteria. Results: All the cases exhibited bilateral optic neuritis (ON). Four patients had abnormalities on brain MRI from the onset,although only three of them developed symptoms correlated to those lesions during the course of their disorder. NMO-IgG was positive in 80%. Conclusion: Optic neuropathy is the most impaired feature in NMO patients. Brain MRI lesions are not compatible with multiple sclerosis and positivity of the NMO-IgG are also present in NMO pediatric patients, confirming the heterogeneity in the expression of this disorder. - RESUMEN Objetivo: Analizar las características clínicas y de neuroimagen, y la positividad del canal de agua acuaporin (NMO-IgG) en pacientes pediátricos con neuromielitis óptica (NMO). Este trastorno puede tener una expresión clínica variable. El término espectro de NMO ha sido propuesto para poder incluir la variabilidad. Metodo: Evaluamos seis pacientes pediátricos, con una mediana de edad de 11 años al momento del estudio, con el diagnóstico de NMO de acuerdo a los criterios de Wingerchuck. Resultados: Todos los casos exhibían neuritis óptica bilateral (ON). Cuatro pacientes tuvieron anormalidades en la RM cerebral desde el inicio, aunque solo tres de ellos desarrollaron síntomas relacionados con las lesiones durante el curso de la enfermedad. NMO-IgG fue positiva en el 80%. Conclusión: Neuropatía óptica es la característica mayormente observada en los pacientes con NMO. Lesiones cerebrales en la RM cerebral no compatibles con esclerosis multiple y positividad de la NMO-IgG están también presentes en los pacientes pediátricos con NMO; lo cual confirma la heterogeneidad en la expresión clínica de este trastorno

Improving Optical Qualification of Solar Concentrator by FOCuS Tool

AbstractAn improved tool for the shape qualification of parabolic trough mirror modules used in concentrated solar power plants was developed. The tool is based on the fringe reflection theory, in which sinusoidal fringe patterns are projected on a screen and their reflection over a specular surface is recorded by a camera. The observed distortions in the image are related directly to surface deviations from ideal geometry. Relevant aspects of the technique are its high spatial resolution (more than 1 million points per facet), short measurement time and easy setup. The so called FOCuS tool is capable of calculating the mirror slope deviations from its ideal design and the RMS value as a quality factor. Furthermore, the tool generates a file which can be loaded on CENER'S TONATIUH ray tracing software, through a specially developed plug-in, for mirror modeling and intercept factor calculation with several tube absorber geometries

Occupational and Environmental Risks from Mancozeb in Aviation Facilities in the Banana Producing Area of Teapa, Tabasco, Mexico

Purpose: To identify occupational risks and practices in the four aerial fumigation facilities in the Sierra banana growing region and to evaluate environmental impacts from Mancozeb use.Methods: Occupational health risks were identified and practices in the four aerial fumigation facilities in the Sierra banana growing region were documented. Semi-structured interviews were conducted with installation managers. To evaluate environmental impact, samples of water and soil were collected and analysed in an acute toxicity bioassay with Vibrio fischeri, using uncontaminated soil and water to establish background levels.Results: Even in the largest and best-equipped facility, serious risks to workers’ health were encountered from inadequate use of protective equipment by workers. Furthermore, excessive use of pesticide, lack of re-use of unused product, poor facility design and poor use of wash-water were observed, resulting in  maximum toxicity of > 5 times background in discharged water. Parallel soil samples were > 20 times  more toxic than background, being most toxic at > 0.5 km from the discharge point.Conclusion: Areas of opportunity to improve worker health and the environment include proper and  consistent use of protective equipment, re-use of unused product, wastewater reduction and appropriate wastewater treatment.Keywords: Black Sigatoka, Ethylene thiourea, Fumigation, Pesticide, Mancozeb, Airports, Microtox, Vibrio fischeri, Occupational health risks, Toxicit

Influence of Rotations on the Critical State of Soil Mechanics

The ability of grains to rotate can play a crucial role on the collective behavior of granular media. It has been observed in computer simulations that imposing a torque at the contacts modifies the force chains, making support chains less important. In this work we investigate the effect of a gradual hindering of the grains rotations on the so-called critical state of soil mechanics. The critical state is an asymptotic state independent of the initial solid fraction where deformations occur at a constant shear strength and compactness. We quantify the difficulty to rotate by a friction coefficient at the level of particles, acting like a threshold. We explore the effect of this particle-level friction coefficient on the critical state by means of molecular dynamics simulations of a simple shear test on a poly-disperse sphere packing. We found that the larger the difficulty to rotate, the larger the final shear strength of the sample. Other micro-mechanical variables, like the structural anisotropy and the distribution of forces, are also influenced by the threshold. These results reveal the key role of rotations on the critical behavior of soils and suggest the inclusion of rotational variables into their constitutive equations.Comment: 9 pages, 8 figures, Accepted for publication in Computer Physics Communication

Rapid evolution of a novel protective symbiont into keystone taxon in Caenorhabditis elegans microbiota

Protective microbes have a major role in shaping host–pathogen interactions, but their relative importance in the structure of the host microbiota remains unclear. Here, we used a network approach to characterize the impact of a novel, experimentally evolved ‘protective microbial symbiont’ (Enterococcus faecalis) on the structure and predicted function of the natural microbiota of the model organism Caenorhabditis elegans. We used microbial network analysis to identify keystone taxa and describe the hierarchical placement of protective and non-protective symbionts in the microbiota. We found that early colonization with symbionts produce statistically significant changes in the structure of the community. Notably, only the protective E. faecalis became a keystone taxon in the nematode microbiota. Non-protective lineages of the same bacterial species remained comparatively unimportant to the community. Prediction of functional profiles in bacterial communities using PICRUSt2 showed that the presence of highly protective E. faecalis decreased the abundance of ergothioneine (EGT) biosynthesis pathway involved in the synthesis of the antioxidant molecule EGT, a potential public good. These data show that in addition to direct antagonism with virulent pathogens, keystone protective symbionts are linked to modified bacterial community structure and possible reductions in public goods, potentially driving decreased antioxidant defense. We suggest that this response could suppress infection via wholesale microbial community changes to further benefit the host. These findings extend the concept of protective symbionts beyond bodyguards to ecosystem engineers

Magnetic characterization of Fe, Ni, Co nanoparticles dispersed in phyllosilicate type silicon oxide

International audienceWe present the magnetic properties of silica-supported metal (Fe,catalyst) nanoparticles synthesized by precipitation of metal nitrate in ammonia-based medium. Our goal is the study of possible metal-support interactions in the nanoporous catalyst. The temperature dependence of the magnetization for all samples display spin-glass like behavior below c.a. 11-12 K, with clear Curie-Weiss dependence in the high-temperature regime. Spin-glass-like behavior was inferred from dynamic AC susceptibility data after analyzing the frequency-dependence of the in-phase component χ'(f) by the expression W = ΔTf/[Tf Δlog(f)] = 3.0 × 10−3. We found that the magnetic behavior of the catalyst is drastically affected by the existence of interactions between the metal and the support