Diurnal and nocturnal temperatures for Atlantic salmon postsmolts (Salmo salar L.) during their early marine life

Data storage tags (DSTs) were applied to Atlantic salmon (Salmo salar L.) smolts during their seaward migration in the spring of 2002 at a fish counting fence on Campbellton River, Newfoundland. Our objectives were to discover whether or not salmon smolts could carry DSTs and survive, whether or not useful data on thermal habitat could be obtained and interpreted, and whether or not salmon smolts moved vertically in the water column. Data were downloaded from 15 of the recovered tags and revealed the hourly water temperatures experienced by the fish for periods of 3 to 71 days. The data on the DSTs were analyzed for temperature patterns in relation to migration behavior and diurnal movement of the fish. While in the sea, the DSTs recorded night temperatures of 12.5°C, which were higher than day temperatures of 11.6°C; the record from moored recorders, however, indicated that sea temperatures actually declined at night. It is hypothesized that posts-molts avoid avian predators during daylight hours by positioning themselves deeper in the water column and that they were pursuing prey during the deeper vertical descents or ascents noted during the periods of more rapid changes in temperature

Menhaden distribution as mediated by feeding (filter-feeding, phytoplankton)

Distribution patterns of the Atlantic menhaden Brevoortia tyrannus) have been evaluated in respect to the feeding ecology of the species. Feeding experiments, functional morphology, and field distribution studies with young postmetamorphic fish were conducted to differentiate the feeding dynamics of different size menhaden, and to define the relationship between feeding and distribution. Feeding experiments were conducted with 138 mm fork length menhaden to determine their particle size-specific feeding abilities. The minimum size of particles filtered, the minimum size threshold, was 7 to 9 (mu)m. Phytoplankton larger than the minimum size threshold and smaller than 20 (mu)m upper limit for nanoplankton, were filtered at efficiencies averaging 21% (n = 24). Prey particles exceeding the size limits of nanoplankton, were filtered at average efficiencies ranging from 22% to 84%. The mean filtration efficiency for Artemia sp. nauplii of 36% (n = 7) was lower than for smaller phytoplankton prey. as menhaden grown, their feeding repertoire shifts to larger planktonic organism. Surface ultrastructure, epithelial organization, and gross morphology of the branchial basket in menhaden were analyzed with respect to food particle capture, transport of food from the point of capture to point of ingestion, and potential gustatory reception. Branchiospinules, sites of small particle capture, lacked mucous cells, suggesting that food is captured primarily by mechanical sieving. Taste buds on the glossohyal are thought to be mechanoreceptors, whereas taste buds on the crest of the fifth branchial arch are thought to be chemoreceptors. Concurrent synoptic observation of the relative abundance of menhaden and parameters relevant to characterizing primary production along transects in estuarine creek ecosystems have been used to interpret the factors governing the fishes\u27 local distribution. The strongest associations were between catch and chlorophyll-a, catch and microflagellates, and catch and diatoms. Fish often distributed with a gradient of one phytoplankton taxa over another based on selectivity for large phytoplankton cell size. Menhaden are optimal foragers displaying kinesis selecting for areas of optimally sized prey, chemosensory preference for plant versus detrital particles, and possibly taxa specific avoidance. Comparison of latitudinal distribution patterns of menhaden with the latitudinal trends in plankton community size frequency suggest that fish stratify by size at latitude to maximize the efficiency with which they filter-feed

The relationship between smolt and postsmolt growth for Atlantic salmon (Salmo salar) in the Gulf of St. Lawrence

The interaction of ocean climate and growth conditions during the postsmolt phase is emerging as the primary hypothesis to explain patterns of adult recruitment for individual stocks and stock complexes of Atlantic salmon (Salmo salar). Friedland et al. (1993) first reported that contrast in sea surface temperature (SST) conditions during spring appeared to be related to recruitment of the European stock complex. This hypothesis was further supported by the relationship between cohort specific patterns of recruitment for two index stocks and regional scale SST (Friedland et al., 1998). One of the index stocks, the North Esk of Scotland, was shown to have a pattern of postsmolt growth that was positively correlated with survival, indicating that growth during the postsmolt year controls survival and recruitment (Friedland et al., 2000). A similar scenario is emerging for the North American stock complex where contrast in ocean conditions during spring in the postsmolt migration corridors was associated with the recruitment pattern of the stock complex (Friedland et al., 2003a, 2003b). The accumulation of additional data on the postsmolt growth response of both stock complexes will contribute to a better understanding of the recruitment process in Atlantic salmon

Recovery of the Gulf of Maine--Georges Bank Atlantic herring (Clupea harengus) complex: perspectives based on bottom trawl survey data

NMFS bottom trawl survey data were used to describe changes in distribution, abundance, and rates of population change occurring in the Gulf of Maine–Georges Bank herring (Clupea harengus) complex during 1963–98. Herring in the region have fully recovered following severe overfishing during the 1960s and 1970s. Three distinct, but seasonally intermingling components from the Gulf of Maine, Nantucket Shoals (Great South Channel area), and Georges Bank appear to compose the herring resource in the region. Distribution ranges contracted as herring biomass declined in the late 1970s and then the range expanded in the 1990s as herring increased. Analysis of research survey data suggest that herring are currently at high levels of abundance and biomass. All three components of the stock complex, including the Georges Bank component, have recovered to pre-1960s abundance. Survey data support the theory that herring recolonized the Georges Bank region in stages from adjacent components during the late 1980s, most likely from herring spawning in the Gulf of Maine

Contrasting patterns in the occurrence and biomass centers of gravity among fish and macroinvertebrates in a continental shelf ecosystem

The distribution of a group of fish and macroinvertebrates (n = 52) resident in the US Northeast Shelf large marine ecosystem were characterized with species distribution models (SDM), which in turn were used to estimate occurrence and biomass center of gravity (COG). The SDMs were fit using random forest machine learning and were informed with a range of physical and biological variables. The estimated probability of occurrence and biomass from the models provided the weightings to determine depth, distance to the coast, and along-shelf distance COG. The COGs of occupancy and biomass habitat tended to be separated by distances averaging 50 km, which approximates half of the minor axis of the subject ecosystem. During the study period (1978–2018), the biomass COG has tended to shift to further offshore positions whereas occupancy habitat has stayed at a regular spacing from the coastline. Both habitat types have shifted their along-shelf distances, indicating a general movement to higher latitude or to the Northeast for this ecosystem. However, biomass tended to occur at lower latitudes in the spring and higher latitude in the fall in a response to seasonal conditions. Distribution of habitat in relation to depth reveals a divergence in response with occupancy habitat shallowing over time and biomass habitat distributing in progressively deeper water. These results suggest that climate forced change in distribution will differentially affect occurrence and biomass of marine taxa, which will likely affect the organization of ecosystems and the manner in which human populations utilize marine resources.publishedVersio

Extraosseous Osteosarcoma of the Esophagus: A Case Report

Extraosseous osteosarcoma (EOO) is a malignant mesenchymal neoplasm that is located in the soft tissues without direct attachment to the skeletal system and that produces osteoid, bone, or chondroid material. EOO is an extremely rare disease, accounting for only 1% of soft tissue sarcomas, and typically presents in either an extremity or the retroperitoneum. This paper presents the case of a 45-year-old Caucasian male with extraosseous osteosarcoma of the esophagus

A comparative evaluation of interactive segmentation algorithms

In this paper we present a comparative evaluation of four popular interactive segmentation algorithms. The evaluation was carried out as a series of user-experiments, in which participants were tasked with extracting 100 objects from a common dataset: 25 with each algorithm, constrained within a time limit of 2 min for each object. To facilitate the experiments, a “scribble-driven” segmentation tool was developed to enable interactive image segmentation by simply marking areas of foreground and background with the mouse. As the participants refined and improved their respective segmentations, the corresponding updated segmentation mask was stored along with the elapsed time. We then collected and evaluated each recorded mask against a manually segmented ground truth, thus allowing us to gauge segmentation accuracy over time. Two benchmarks were used for the evaluation: the well-known Jaccard index for measuring object accuracy, and a new fuzzy metric, proposed in this paper, designed for measuring boundary accuracy. Analysis of the experimental results demonstrates the effectiveness of the suggested measures and provides valuable insights into the performance and characteristics of the evaluated algorithms

Heritable genome editing in C. elegans via a CRISPR-Cas9 system

CRISPR-Cas systems have been used with single-guide RNAs for accurate gene disruption and conversion in multiple biological systems. Here we report the use of the endonuclease Cas9 to target genomic sequences in the C. elegans germline, utilizing single-guide RNAs that are expressed from a U6 small nuclear RNA promoter. Our results demonstrate that targeted, heritable genetic alterations can be achieved in C. elegans, providing a convenient and effective approach for generating loss-of-function mutants