Structure of turbulence and sediment stratification in wave-supported mud layers

We present results from laboratory experiments in a wave flume with and without a sediment bed to investigate the turbulent structure and sediment dynamics of wave-supported mud layers. The presence of sediment on the bed significantly alters the structure of the wave boundary layer relative to that observed in the absence of sediment, increasing the TKE by more than a factor of 3 at low wave orbital velocities and suppressing it at the highest velocities. The transition between the low and high-velocity regimes occurs when ReΔ ≃ 450, where ReΔ is the Stokes Reynolds number. In the low-velocity regime (ReΔ 450) the ripples are significantly smaller, the near-bed sediment concentrations are significantly higher and density stratification due to sediment becomes important. In this regime the TKE and Reynolds stress are lower in the sediment bed runs than in comparable runs with no sediment. The regime transition at ReΔ = 450 appears to result from washout of the ripples and increased concentrations of fine sand suspended in the boundary layer, which increases the settling flux and the stratification near the bed. The increased stratification damps turbulence, especially near the top of the high-concentration layer, reducing the layer thickness. We anticipate that these effects will influence the transport capacity of wave-supported gravity currents on the continental shelf

Vertical Boil Propagation from a Submerged Estuarine Sill

Surface disruptions by boils during strong tidal flows over a rocky sill were observed in thermal infrared imagery collected at the Snohomish River estuary in Washington State. Locations of boil disruptions and boil diameters at the surface were quantified and are used to test an idealized model of vertical boil propagation. The model is developed as a two-dimensional approximation of a three-dimensional vortex loop, and boil vorticity is derived from the flow shear over the sill. Predictions of boil disruption locations were determined from the modeled vertical velocity, the sill depth, and the over-sill velocity. Predictions by the vertical velocity model agree well with measured locations (rms difference 3.0 m) and improve by using measured velocity and shear (rms difference 1.8 m). In comparison, a boil-surfacing model derived from laboratory turbulent mixed-layer wakes agrees with the measurements only when stratification is insignificant

Turbulent Kinetic Energy and Coherent Structures in a Tidal River

We investigate the relationship between turbulence statistics and coherent structures (CS) in an unstratified reach of the Snohomish River estuary using in situ velocity measurements and surface infrared (IR) imaging. Sequential IR images are used to estimate surface flow characteristics via a particle-image-velocimetry (PIV) technique, and are conditionally sampled to delineate the surface statistics of bottom-generated CS, or boils. In the water column, we find that turbulent kinetic energy (TKE) production exceeds dissipation near the bed but is less than dissipation in the midwater column and that TKE flux divergence closes a significant portion of the measured imbalance. The surface boundary leads to divergence in upwelling CS, and leads to the redistribution of vertical TKE to the horizontal. Very near the surface, statistical anisotropy is observed at length scales larger than the depth H (3–5 m), while boil-scale motions of O(1)m are nearly isotropic and exhibit a 25/3 turbulent cascade to smaller scales. Conditional sampling suggests that TKE dissipation in boils is approximately 2 times greater on average than dissipation in ambient flow. Similarly, surface boils are marked by significantly greater velocity variance, upwelling, divergence, and TKE flux divergence than ambient flow regions. Coherent structures and their surface manifestation, therefore, play an important role in the vertical transport of TKE and the water column distribution of dissipation, and are an important component of the TKE budget

Wave breaking turbulence at the offshore front of the Columbia River Plume

© The Author(s), 2014. This article is distributed under the terms of the Creative Commons Attribution License. The definitive version was published in Geophysical Research Letters 41 (2014): 8987–8993, doi:10.1002/2014GL062274.Observations at the Columbia River plume show that wave breaking is an important source of turbulence at the offshore front, which may contribute to plume mixing. The lateral gradient of current associated with the plume front is sufficient to block (and break) shorter waves. The intense whitecapping that then occurs at the front is a significant source of turbulence, which diffuses downward from the surface according to a scaling determined by the wave height and the gradient of wave energy flux. This process is distinct from the shear-driven mixing that occurs at the interface of river water and ocean water. Observations with and without short waves are examined, especially in two cases in which the background conditions (i.e., tidal flows and river discharge) are otherwise identical.This work was supported by the Office of Naval Research, as part of the Data Assimilation and Remote Sensing for Littoral Applications (DARLA) project and in coordination with the Rivers and Inlets (RIVET) program

On the response of a buoyant plume to downwelling-favorable wind stress

Author Posting. © American Meteorological Society, 2012. This article is posted here by permission of American Meteorological Society for personal use, not for redistribution. The definitive version was published in Journal of Physical Oceanography 42 (2012): 1083–1098, doi:10.1175/JPO-D-11-015.1.Here, the response of a coastally trapped buoyant plume to downwelling-favorable wind forcing is explored using a simplified two-dimensional numerical model and a prognostic theory for the resulting width, depth, and density anomaly and along-shelf transport of the plume. Consistent with the numerical simulations, the analytical model shows that the wind causes mixing of the plume water and that the forced cross-shelf circulation can also generate significant deepening and surface narrowing, as well as increased along-shelf transport. The response is due to a combination of the purely advective process that leads to the steepening of the isopycnals and the entrainment of ambient water into the plume. The advective component depends on the initial plume geometry: plumes that have a large fraction of their total width in contact with the bottom (“bottom trapped”) suffer relatively small depth and width changes compared to plumes that have a large fraction of their total width detached from the bottom (“surface trapped”). Key theoretical parameters are Wγ/Wα, the ratio of the width of the plume detached from the bottom to the width of the plume in contact with it, and the ratio of the wind-generated mixed layer δe to the initial plume depth hp, which determines the amount of water initially entrained into the plume. The model results also show that the cross-shelf circulation can be strongly influenced by the wind-driven response in combination with the geostrophic shear of the plume. The continuous entrainment into the plume, as well as transient events, is also discussed.This work has been supported by FONDECYT Grant 1070501. S. Lentz received support by theNational Science Foundation GrantOCE-0751554. C. Moffat had additional support from the National Science Foundation Office of Polar Programs through U.S. Southern Ocean GLOBEC Grants OPP 99-10092 and 06- 23223.2013-01-0

Filtration rates of the non-native Chinese mystery snail (Bellamya chinensis) and potential impacts on microbial communities

Invasive species in the phylum Mollusca, including gastropods and bivalves, have caused substantial impacts in freshwater ecosystems. The Chinese mystery snail, Bellamya chinensis, is a large viviparid snail native to Southeastern Asia and widely introduced throughout United States and parts of Canada and Europe. B. chinensis is a facultative filter-feeding detritivore that can both graze epiphytic diatoms using its radula and filter-feed its breathing water. Despite mounting concern associated with the expanding range and increasing abundance of B. chinensis in many parts of its invaded range, the potential ecological impacts of this non-native species remain largely unknown. Here, we used a series of laboratory experiments to assess filtration rates of B. chinensis and quantify its effects on microbial communities. According to both microcosm (24-hour, 4-L suspension) and mesocosm (5-day, 90-L suspension) experimental trials, B. chinensis exhibited an average filtration rate of 106-113 mL snail-1h-1(1.45 mL mg DW-1h-1) and an individual maximum of 471 mL snail-1h-1(6.15 mL mg DW-1h-1). These values are comparable to reported filtration rates for high-profile invasive, freshwater bivalves. Relationships between snail size and filtration rate relationship suggests that B. chinensis display an ontogenetic shift in feeding behavior from primarily radular grazing to increased filter-feeding at threshold size of approximately 44 mm shell height. Our experiments also revealed that high snail densities can result in small, significant shifts in bacterial community composition. These results suggest that B. chinensis may influence microbial communities either directly by using bacteria as a food source or indirectly by producing sufficiently large quantities of fecal and pseudo-fecal material to affect bacterial activity and growth. The overall ecological effects and importance of B. chinensis filtration behavior remain unclear, but our experimental results suggest that these impacts may be large and should be further investigated to better understand its potential role in coupling benthic and pelagic food webs in lake ecosystems.Las especies invasoras del phyllum Mollusca, incluyendo los gasterópodos y bivalvos, han causado impactos importantes en los ecosistemas dulceacuícolas. Bellamya chinensis, es un vivíparo de gran tamaño, nativo del sureste de Asia y ampliamente introducido a lo largo de los Estados Unidos y parte de Canadá y Europa. B. chinensis es una especie detritivora- filtradora facultativa, que puede tanto ramonear diatomeas epifitas usando su rádula como filtrar el agua que respiran. A pesar de la creciente preocupación asociada al incremento en la abundancia y rango de distribución de B. chinensis en las regiones ya colonizadas, el potencial impacto ecológico de esta especie introducida permanece ampliamente desconocido. En este estudio, usamos series de experimentos de laboratorio para evaluar las tasas de filtración de B. chinensis y cuantificar su efecto en las comunidades microbianas. De acuerdo con los experimentos realizados tanto en los microcosmos (24-hour, 4-L suspensión) como en los mesocosmos (5-day, 90-L suspensión), B. chinensis mostró una tasa promedio de filtración de 106-113 mL caracol-1h-1(1.45 mL mg peso seco-1h-1) y un máximo por individuo de 471 mL caracol-1h-1(6.15 mL mg peso seco-1h-1). Estos valores son comparables a otros reportados para especies de bivalvos dulceacuícolas altamente invasivas. La relación entre el tamaño de los caracoles y las tasas de filtración sugieren que B. chinensis muestra un cambio ontogénico en la manera de alimentarse, de ramoneo a una mayor alimentación por filtración, a partir de un umbral de tamaño de la concha de aproximadamente 44 mm de altura. Nuestros experimentos también revelan que altas densidades de caracoles generan pequeños cambios pero significativos en las comunidades microbianas. Estos resultados sugieren que B. chinensis afectaría las comunidades microbianas de forma directa usando las bacterias como fuente de alimentación o indirectamente al producir una cantidad de materia fecal o seudo-fecal, suficiente para afectar la actividad y crecimiento bacteriano. El impacto ecológico global y el comportamiento como filtrador de B. chinensis aún no son claros, pero nuestros resultados experimentales sugieren que estos impactos pueden ser importantes y se deben investigar mejor para entender más su papel potencial en el acoplamiento de las redes tróficas bentónicas y pelágicas en los sistemas lacustres

The impact of storms and stratification on sediment transport in the Rhine region of freshwater influence

We present measurements of along and across-shore sediment transport in a region of the Dutch coast 10 kilometers north of the Rhine River mouth. This section of the coast is characterized by strong vertical density stratification because it is within the mid-field region of the Rhine region of freshwater influence, where processes typical of the far-field, such as tidal straining, are modified by the passage of distinct freshwater lenses at the surface. The experiment captured two storms, and a wide range of wind, wave, tidal and stratification conditions. We focus primarily on the mechanisms leading to cross-shore sediment flux at a mooring location in 12m of water, which are responsible for the exchange of sediment between the near-shore and the inner shelf. Net transport during storms was directed offshore and influenced by cross-shelf winds, while net transport during spring tides was determined by the mean state of stratification. Tidal straining dominated during neap tides; however, cross-shore transport was negligible due to small sediment concentrations. The passage of freshwater lenses manifested as strong pulses of offshore transport primarily during spring tides. We observe that both barotropic and baroclinic processes are relevant for cross-shore transport at depth and, since transport rates due to these competing processes were similar, the net transport direction will be determined by the frequency and sequencing of these modes of transport. Based on our observations, we find that wind- and wave-driven transport during storms tends move fine sediment offshore, while calmer, more stratified conditions move it back onshore

Generation of internal waves by a supercritical stratified plume

The generation of internal waves by a propagating river plume is studied in the framework of a fully nonlinear nonhydrostatic numerical model. The vertical fluid stratification, parameters of tide, river discharge, and the bottom topography were taken close to those observed near the Columbia River mouth. It was found that in the beginning of the ebb tidal phase the river water intruding into the sea behaves as a surface jet stream. It collides with the stagnant shelf waters and sinks down in the area of the outer plume boundary, forming a head of the gravity current. In supercritical conditions which are normally realized at the first stage of the ebb tidal phase, internal waves are arrested in the head of the gravity current because their phase speed is smaller than the velocity of the plume. They are released and radiate from the plume when the speed of the decelerating front becomes smaller than the internal wave phase speed. This mechanism of the wave generation is sensitive to the stratification of the ambient shelf waters. It was found that dramatic decay of the buoyancy frequency profile from the surface to the bottom provides the most favorable conditions for the efficient disintegration of the head of the gravity current into a packet of internal waves and their fast separation from the plume. In the case when the fluid stratification on the shelf is close to monotonous, the disintegration of the head of the gravity current into a packet of solitary internal waves is not expected. Copyright 2009 by the American Geophysical Union

Mississippi River and Sea Surface Height Effects on Oil Slick Migration

Millions of barrels of oil escaped into the Gulf of Mexico (GoM) after the 20 April, 2010 explosion of Deepwater Horizon (DH). Ocean circulation models were used to forecast oil slick migration in the GoM, however such models do not explicitly treat the effects of secondary eddy-slopes or Mississippi River (MR) hydrodynamics. Here we report oil front migration that appears to be driven by sea surface level (SSL) slopes, and identify a previously unreported effect of the MR plume: under conditions of relatively high river discharge and weak winds, a freshwater mound can form around the MR Delta. We performed temporal oil slick position and altimeter analysis, employing both interpolated altimetry data and along-track measurements for coastal applications. The observed freshwater mound appears to have pushed the DH oil slick seaward from the Delta coastline. We provide a physical mechanism for this novel effect of the MR, using a two-layer pressure-driven flow model. Results show how SSL variations can drive a cross-slope migration of surface oil slicks that may reach velocities of order km/day, and confirm a lag time of order 5–10 days between mound formation and slick migration, as observed form the satellite analysis. Incorporating these effects into more complex ocean models will improve forecasts of slick migration for future spills. More generally, large SSL variations at the MR mouth may also affect the dispersal of freshwater, nutrients and sediment associated with the MR plume

Cross-shore stratified tidal flow seaward of a mega-nourishment

The Sand Engine is a 21.5 million m3 experimental mega-nourishment project that was built in 2011 along the Dutch coast. This intervention created a discontinuity in the previous straight sandy coastline, altering the local hydrodynamics in a region that is in influenced by the buoyant plume generated by the Rhine River. This work investigates the response of the cross-shore stratified tidal flow to the coastal protrusion created by the Sand Engine emplacement by using a 13 hour velocity and density survey. Observations document the development of strong baroclinic-induced cross-shore exchange currents dictated by the intrusion of the river plume fronts as well as the classic tidal straining which are found to extend further into the nearshore (from 12 to 6m depth), otherwise believed to be a mixed zone