Inversions in the third chromosome of wild races of Drosophila pseudoobscura, and their use in the study of the history of the species

Genetic studies showed several years ago that the third chromosomes of wild strains of Drosophila pseudoobscura often carry suppressors of crossing-over. The salivary gland chromosome technique has made it possible to demonstrate not only that these are inverted sections, but also that there are many different inversions present in wild populations inhabiting different geographical regions. So far we have found at least fourteen different gene-sequences in wild stocks, and have found that in most geographical regions several sequences are present, though no single sequence appears to occur throughout the range of the species. There are a number of problems raised by these facts, most of which need further study; the present account is to be regarded only as a preliminary note

Microgeographic variation in Drosophila pseudoobscura

Studies of recent years have revealed a prodigious amount of variability in the gene arrangement in the chromosomes of several species of Drosophila. In natural populations of D. pseudooobscura the third chromosome is more variable than the rest; eighteen structural types, related to each other mostly as overlapping inversions, have been found in this chromosome alone.(1

Role of the autosomes in the Drosophila pseudoobscura hybrids

Lancefield(1) discovered that the species Drosophila pseudoobscura consists of two races, called race A and race B, respectively. Completely sterile males and partially fertile females appear in the offspring if the races are intercrossed. Males coming from the cross, B♀ X A♂, have rudimentary testes that are smaller in size than the testes of normal males. Testes of the A♀ X B♂ hybrid males are normal in size but incapable of producing functional sperm

Genetic Polymorphism in Evolving Population

We present a model for evolving population which maintains genetic polymorphism. By introducing random mutation in the model population at a constant rate, we observe that the population does not become extinct but survives, keeping diversity in the gene pool under abrupt environmental changes. The model provides reasonable estimates for the proportions of polymorphic and heterozygous loci and for the mutation rate, as observed in nature

Radseq dataset with 90% missing data fully resolves recent radiation of Petalidium (Acanthaceae) in the ultra-arid deserts of Namibia

Deserts, even those at tropical latitudes, often have strikingly low levels of plant diversity, particularly within genera. One remarkable exception to this pattern is the genus Petalidium (Acanthaceae), in which 37 of 40 named species occupy one of the driest environments on Earth, the Namib Desert of Namibia and neighboring Angola. To contribute to understanding this enigmatic diversity, we generated RADseq data for 47 accessions of Petalidium representing 22 species. We explored the impacts of 18 different combinations of assembly parameters in de novo assembly of the data across nine levels of missing data plus a best practice assembly using a reference Acanthaceae genome for a total of 171 sequence datasets assembled. RADseq data assembled at several thresholds of missing data, including 90% missing data, yielded phylogenetic hypotheses of Petalidium that were confidently and nearly fully resolved, which is notable given that divergence time analyses suggest a crown age for African species of 3.6–1.4 Ma. De novo assembly of our data yielded the most strongly supported and well-resolved topologies; in contrast, reference-based assembly performed poorly, perhaps due in part to moderate phylogenetic divergence between the reference genome, Ruellia speciosa, and the ingroup. Overall, we found that Petalidium, despite the harshness of the environment in which species occur, shows a net diversification rate (0.8–2.1 species per my) on par with those of diverse genera in tropical, Mediterranean, and alpine environments