176 research outputs found

    miRecords: an integrated resource for microRNA–target interactions

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    MicroRNAs (miRNAs) are an important class of small noncoding RNAs capable of regulating other genes’ expression. Much progress has been made in computational target prediction of miRNAs in recent years. More than 10 miRNA target prediction programs have been established, yet, the prediction of animal miRNA targets remains a challenging task. We have developed miRecords, an integrated resource for animal miRNA–target interactions. The Validated Targets component of this resource hosts a large, high-quality manually curated database of experimentally validated miRNA–target interactions with systematic documentation of experimental support for each interaction. The current release of this database includes 1135 records of validated miRNA–target interactions between 301 miRNAs and 902 target genes in seven animal species. The Predicted Targets component of miRecords stores predicted miRNA targets produced by 11 established miRNA target prediction programs. miRecords is expected to serve as a useful resource not only for experimental miRNA researchers, but also for informatics scientists developing the next-generation miRNA target prediction programs. The miRecords is available at http://miRecords.umn.edu/miRecords

    Accurate Temporal Action Proposal Generation with Relation-Aware Pyramid Network

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    Accurate temporal action proposals play an important role in detecting actions from untrimmed videos. The existing approaches have difficulties in capturing global contextual information and simultaneously localizing actions with different durations. To this end, we propose a Relation-aware pyramid Network (RapNet) to generate highly accurate temporal action proposals. In RapNet, a novel relation-aware module is introduced to exploit bi-directional long-range relations between local features for context distilling. This embedded module enhances the RapNet in terms of its multi-granularity temporal proposal generation ability, given predefined anchor boxes. We further introduce a two-stage adjustment scheme to refine the proposal boundaries and measure their confidence in containing an action with snippet-level actionness. Extensive experiments on the challenging ActivityNet and THUMOS14 benchmarks demonstrate our RapNet generates superior accurate proposals over the existing state-of-the-art methods.Comment: accepted by AAAI-2

    Artificial Coal: Facile and Green Production Method via Low-Temperature Hydrothermal Carbonization of Lignocellulose

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    A new concept is proposed for the production of artificial coal under HTC conditions using Mg(NO3)2 as an oxidant in a short time, which is found to enhance the coalification degree of hydrochar from lignocellulosic materials. Pressure promotes decarboxylation reactions of lignocellulose to form hollow smooth-faced regular spherical particles, avoiding the agglomeration of hydrochar particles. In parallel, oxidation can break down the biopolymer structure to form low-molecular-weight compounds, which is found to be a key step during artificial coal formation. The artificial coal synthesized has a high degree of coalification

    A Multi-port Smart Transformer for Green Airport Electrification

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    Green transportation and renewable energy production have attracted a global attention due to the needs of decreasing the environmental impact and still sustain increased energy needs. In this framework, the aircraft and airports are facing a profound renovations towards green technologies, among which the electrical ones are playing a central role. This paper explores how a Smart Transformer can upgrade the existing airport power system, enabling an efficient interface for renewable energy, electric vehicles and the future hybrid/electric aircraft, substituting the ground power units and enabling a smarter behavior of the electrical grid

    Lipid and glucose metabolism in senescence

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    Senescence is an inevitable biological process. Disturbances in glucose and lipid metabolism are essential features of cellular senescence. Given the important roles of these types of metabolism, we review the evidence for how key metabolic enzymes influence senescence and how senescence-related secretory phenotypes, autophagy, apoptosis, insulin signaling pathways, and environmental factors modulate glucose and lipid homeostasis. We also discuss the metabolic alterations in abnormal senescence diseases and anti-cancer therapies that target senescence through metabolic interventions. Our work offers insights for developing pharmacological strategies to combat senescence and cancer

    All-small-molecule organic solar cells with over 14% efficiency by optimizing hierarchical morphologies

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    The high efficiency all-small-molecule organic solar cells (OSCs) normally require optimized morphology in their bulk heterojunction active layers. Herein, a small-molecule donor is designed and synthesized, and single-crystal structural analyses reveal its explicit molecular planarity and compact intermolecular packing. A promising narrow bandgap small-molecule with absorption edge of more than 930 nm along with our home-designed small molecule is selected as electron acceptors. To the best of our knowledge, the binary all-small-molecule OSCs achieve the highest efficiency of 14.34% by optimizing their hierarchical morphologies, in which the donor or acceptor rich domains with size up to ca. 70 nm, and the donor crystals of tens of nanometers, together with the donor-acceptor blending, are proved coexisting in the hierarchical large domain. All-small-molecule photovoltaic system shows its promising for high performance OSCs, and our study is likely to lead to insights in relations between bulk heterojunction structure and photovoltaic performance.Funding Agencies|Ministry of Science and Technology of ChinaMinistry of Science and Technology, China [2016YFA0200700, 2016YFF0203803]; National Natural Science Foundation of ChinaNational Natural Science Foundation of China [51961135103, 51973043, 21822503, 21534003, 21721002]; Beijing Nova ProgramBeijing Municipal Science &amp; Technology Commission [Z17110001117062]; Youth Innovation Promotion Association; K.C.Wong Education Foundation; Chinese Academy of SciencesChinese Academy of Sciences; Swedish Research Council VRSwedish Research Council [2018-06048, 2018-05484]</p

    Milk fat globule membrane promotes brain development in piglets by enhancing the connection of white matter fiber trace

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    IntroductionBrain development during infancy is crucial for later health and development. Although Milk Fat Globule Membrane (MFGM) has been demonstrated to enhance brain development, further investigation is needed to determine the optimal dose.MethodsIn this study, 80 piglets aged 2 days were randomly assigned to four groups: Control group, MFGM-L (1.74 g MFGM per 100 g diet), MFGM-M (4.64 g MFGM per 100 g diet), and MFGM-H (6.09 g MFGM per 100 g diet). Daily body weight and milk intake of the piglets were recorded until 31 days postnatal. Learning and memory abilities were evaluated using the spatial T-maze test on day 15. MRI analysis was conducted to assess functional and structural changes in brain tissues. Additionally, mRNA and protein expression of brain-derived neurotrophic factor (BDNF) and neurotrophin-3 (NTF-3) in the hippocampus and prefrontal cortex were evaluated.ResultsThe results indicated that the MFGM supplemented diet significantly improved the accuracy of the piglets in the T-maze test, with the MFGM-L group exhibiting the best performance. MRI showed no volumetric differences in the gray and white matter between the groups. However, the fractional anisotropy in the left and right hippocampus of piglets in the MFGM-L group was significantly higher than in the other three groups. Furthermore, there was a strong correlation between the accuracy of the T-maze test and hippocampal fractional anisotropy.DiscussionThe MFGM supplemented diet also increased the expression of BDNF in the cerebral cortex. However, the changes in BDNF were not consistent with the results of the T-maze test. In conclusion, adding 1.74 g MFGM per 100 g diet can significantly improve neonatal piglets’ learning and memory abilities, potentially by enhancing the connection of white matter fiber bundles in the brain

    A dual specificity kinase, DYRK1A, as a potential therapeutic target for head and neck squamous cell carcinoma

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    Despite advances in clinical management, 5-year survival rate in patients with late-stage head and neck squamous cell carcinoma (HNSCC) has not improved significantly over the past decade. Targeted therapies have emerged as one of the most promising approaches to treat several malignancies. Though tyrosine phosphorylation accounts for a minority of total phosphorylation, it is critical for activation of signaling pathways and plays a significant role in driving cancers. To identify activated tyrosine kinase signaling pathways in HNSCC, we compared the phosphotyrosine profiles of a panel of HNSCC cell lines to a normal oral keratinocyte cell line. Dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A (DYRK1A) was one of the kinases hyperphosphorylated at Tyr-321 in all HNSCC cell lines. Inhibition of DYRK1A resulted in an increased apoptosis and decrease in invasion and colony formation ability of HNSCC cell lines. Further, administration of the small molecular inhibitor against DYRK1A in mice bearing HNSCC xenograft tumors induced regression of tumor growth. Immunohistochemical labeling of DYRK1A in primary tumor tissues using tissue microarrays revealed strong to moderate staining of DYRK1A in 97.5% (39/40) of HNSCC tissues analyzed. Taken together our results suggest that DYRK1A could be a novel therapeutic target in HNSCC
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