Interannual Variations and Trends in Global Land Surface Phenology Derived from Enhanced Vegetation Index During 1982-2010

Land swiace phenology is widely retrieved from satellite observations at regional and global scales, and its long-term record has been demonstmted to be a valuable tool for reconstructing past climate variations, monitoring the dynamics of terrestrial ecosystems in response to climate impacts, and predicting biological responses to future climate scenarios. This srudy detected global land surface phenology from the advanced very high resolution radiometer (AVHRR) and the Moderate Resolution Imaging Spectroradiometer (MODIS) data from 1982 to 2010. Based on daily enhanced vegetation index at a spatial resolution of 0.05 degrees, we simulated the seasonal vegetative trajectory for each individual pixel using piecewise logistic models, which was then used to detect the onset of greenness increase (OGI) and the length of vegetation growing season (GSL). Further, both overall interannual variations and pixel-based trends were examIned across Koeppen's climate regions for the periods of 1982-1999 and 2000-2010, respectively. The results show that OGI and OSL varied considerably during 1982-2010 across the globe. Generally, the interarmual variation could be more than a month in precipitation-controlled tropical and dry climates while it was mainly less than 15 days in temperature-controlled temperate, cold, and polar climates. OGI, overall, shifted early, and GSL was prolonged from 1982 to 2010 in most climate regions in North America and Asia while the consistently significant trends only occurred in cold climate and polar climate in North America. The overall trends in Europe were generally insignificant. Over South America, late OGI was consistent (particularly from 1982 to 1999) while either positive or negative OSL trends in a climate region were mostly reversed between the periods of 1982-1999 and 2000-2010. In the Northern Hemisphere of Africa, OGI trends were mostly insignificant, but prolonged GSL was evident over individual climate regions during the last 3 decades. OGI mainly showed late trends in the Southern Hemisphere of Africa while GSL was reversed from reduced GSL trends (1982-1999) to prolonged trends (2000-2010). In Australia, GSL exhibited considerable interannual variation, but the consistent trend lacked presence in most regions. Finally, the proportion of pixels with significant trends was less than I% in most of climate regions although it could be as large as 10%

A Comparison of Tropical Rainforest Phenology Retrieved From Geostationary (SEVIRI) and Polar-Orbiting (MODIS) Sensors Across the Congo Basin

The seasonal and interannual dynamics of tropical rainforests play a critical role in the global carbon cycle and climate change. This paper retrieved and compared land surface phenology from observations acquired by the Spinning Enhanced Visible and Infrared Imager (SEVIRI) onboard geostationary satellites and the Moderate Resolution Imaging Spectroradiometer (MODIS) on polar-orbiting satellites over the Congo Basin. To achieve this,we first retrieved canopy greenness cycles (CGCs) and their transition timing from two-band enhanced vegetation index (EVI2) derived from SEVIRI and MODIS data between 2006 and 2013.We then assessed the influences of SEVIRI and MODIS data quality on the reconstruction of the EVI2 temporal trajectory, the detection of the CGC onset and end timing, and the total number of successful CGC retrievals. The significance of influences was determined using the one-tailed two-sample Kolmogorov–Smirnov test. The results indicate that diurnal SEVIRI observations greatly increased the probability of capturing cloud-free daily EVI2 in the rainforest-dominated region of the Congo Basin, where the proportion of good quality (PGQ) observations during a CGC was up to 80% higher than that from MODIS. As a result, the double annual CGCs of the Congo Basin rainforests were well identified from SEVIRI but sparsely detected from MODIS, whereas the single annual CGC in the savanna-dominated northern and southern Congo Basin was successfully retrieved from both SEVIRI and MODIS. Moreover, the decreases of PGQ in an EVI2 time series were found to significantly increase the uncertainties of retrieved phenological timings and increase the probabilities of CGC retrieval failures

The HD-GYP Domain Protein RpfG of Xanthomonas oryzae pv. oryzicola Regulates Synthesis of Extracellular Polysaccharides that Contribute to Biofilm Formation and Virulence on Rice

Bacterial leaf streak caused by Xanthomonas oryzae pv. oryzicola (Xoc) is one of the most important diseases in rice. However, little is known about the pathogenicity mechanisms of Xoc. Here we have investigated the function of three HD-GYP domain regulatory proteins in biofilm formation, the synthesis of virulence factors and virulence of Xoc. Deletion of rpfG resulted in altered production of extracellular polysaccharides (EPS), abolished virulence on rice and enhanced biofilm formation, but had little effect on the secretion of proteases and motility. In contrast, mutational analysis showed that the other two HD-GYP domain proteins had no effect on virulence factor synthesis and tested phenotypes. Mutation of rpfG led to up-regulation of the type III secretion system and altered expression of three putative glycosyltransferase genes gumD, pgaC and xagB, which are part of operons directing the synthesis of different extracellular polysaccharides. The pgaABCD and xagABCD operons were greatly up-regulated in the Xoc Delta rpfG mutant, whereas the expression of the gum genes was unaltered or slightly enhanced. The elevated biofilm formation of the Xoc Delta rpfG mutant was dramatically reduced upon deletion of gumD, xagA and xagB, but not when pgaA and pgaC were deleted. Interestingly, only the Delta gumD mutant, among these single gene mutants, exhibits multiple phenotype alterations including reduced biofilm and EPS production and attenuated virulence on rice. These data indicate that RpfG is a global regulator that controls biofilm formation, EPS production and bacterial virulence in Xoc and that both gumD- and xagB-dependent EPS contribute to biofilm formation under different conditions

Exploration of Scaling Effects on Coarse Resolution Land Surface Phenology

Numerous land surface phenology (LSP) datasets have been produced from various coarse resolution satellite data and different detection algorithms from regional to global scales. In contrast to field-observed phenological events that are defined by clearly evident organismal changes with biophysical meaning, current approaches to detecting transitions in LSP only determine the timing of variations in remotely sensed observations of surface greenness. Since activities to bridge LSP and field observations are challenging and limited, our understanding of the biophysical characteristics of LSP transitions is poor. Therefore, we set out to explore the scaling effects on LSP transitions at the nominal start of growing season (SOS) by comparing detections from coarse resolution data with those from finer resolution imagery. Specifically, using a hybrid piecewise-logistic-model-based LSP detection algorithm, we detected SOS in the agricultural core of the United States—central Iowa—at two scales: first, at a finer scale (30 m) using reflectance generated by fusing MODIS data with Landsat 8 OLI data (OLI SOS) and, second, at a coarser resolution of 500 m using Visible Infrared Imaging Radiometer Suite (VIIRS) observations. The VIIRS SOS data were compared with OLI SOS that had been aggregated using a percentile approach at various degrees of heterogeneity. The results revealed the complexities of SOS detections and the scaling effects that are latent at the coarser resolution. Specifically, OLI SOS variation defined using standard deviation (SD) was as large as 40 days within a highly spatially heterogeneous VIIRS pixel; whereas, SD could be \u3c 10 days for a more homogeneous set of pixels. Furthermore, the VIIRS SOS detections equaled the OLI SOS (with an absolute difference less than one day) in N60% of OLI pixels within a homogeneous VIIRS pixel, but in \u3c 20% of OLI pixels within a spatially heterogeneous VIIRS pixel. Moreover, the SOS detections in a coarser resolution pixel reflected the timing at which vegetation greenup onset occurred in 30% of area, despite variation in SOS heterogeneities. This result suggests that (1) the SOS detections at coarser resolution are controlled more by the earlier SOS pixels at the finer resolution rather than by the later SOS pixels, and (2) it should be possible to well simulate the coarser SOS value by selecting the timing at 30th percentile SOS at the finer resolution. Finally, it was demonstrated that in homogeneous areas the VIIRS SOS was comparable with OLI SOS with an overall difference of \u3c 5 days