ALKALOHALOPHILIC BACTERIA OF THE FAMILY BACILLACEAE IN THE LAKES OF THE BADAIN JARAN DESERT (CHINA)

The Badain Jaran desert is located in the western part of Inner Mongolia (China) in the Alashan Highland. The investigated soda-salt lakes combine high pH (more than 9) and mineralization (up to 400 g/dm3), where conditions for the development of an alkali-halophilic microbial community are created. The purpose of our work was to isolate and study pure alkali-halophilic microorganisms in the lakes of the Badain Jaran desert. From the accumulative cultures of the cortex salt and the microbial mats of the lakes of the Badain Jaran desert, pure cultures belonging to the family Bacillaceae (the phylum Firmicutes) were isolated and described. With the help of biochemical methods, the ecological and physiological properties of the isolated bacteria were determined. The isolated bacteria exhibit the properties of alkalophiles and obligate alkalophiles and develop at pH 7–10.5, the optima ranging from 9 to 10. With respect to the concentration of NaCl, the strains showed the properties of obligate halophiles and extreme halophiles. With respect to temperature, the isolated microorganisms are mesophiles growing at 10–50 °C, the optimal growth being at 30–40 °C. With respect to the substrates used, the isolated cultures are noted for extensive metabolic activity and, when in their natural habitats, are supposedly active participants of the destruction of organic matter. To study the hydrochemical indicators of water, the following methods were used: atomic emission spectrometry with inductively coupled plasma, ion chromatography and capillary electrophoresis. As a result, it was found that a sodium cation and anions of carbonate, bicarbonate of chlorine and sulphate dominate in the soda-salt lakes of the Badain Jaran desert in a multicomponent composition. The results obtained broaden the notion of the diversity and ecological significance of bacteria in the extreme natural ecosystems of the Badain Jaran desert. The isolated strains are of interest for biotechnology as producers of enzymes resistant to high pH and mineralization

Description of a new species of soil algae, Parietochloris grandis sp. nov., and study of its fatty acid profiles under different culturing conditions

© 2018 Elsevier B.V. The new species Parietochloris grandis sp. nov. is described from forest soil in the Dnipropetrovsk region, Ukraine. The description is based on morphological features and the phylogenetic analysis of partial SSU rDNA and rbcL genes. Phylogenetic analysis places P. grandis in the Parietochloris clade, within the family Trebouxiophyceae. The novel strain formed a strongly supported monophyletic lineage with the type species of Parietochloris, P. alveolaris. P. grandis differed from other species in the Parietochloris clade by the size and form of vegetative cells and the large number of zoospores in zoosporangia. A number of experiments with different phosphates and nitrates concentrations were conducted to evaluate changes in fatty acid profile and biomass. The dominant fatty acids during cultivation on standard BG-11 medium, as well as with the phosphates concentrations ranged from 0.22 to 2 mM, were linoleic acid (24–25%), palmitic acid (12–14%), linolenic acid (9–12%), and oleic acid (7–11%). The content of arachidonic acid and eicosapentaenoic acid ranged from 3.5 to 4.5% and 0.7% to 0.8%, respectively. The fatty acid profile and total fatty acids varied significantly under different nutrient deficiency. The greatest variation was found for oleic acid (9–46%) and linolenic acid (2–13%). The percentage of arachidonic acid was the highest with a standard nitrates concentration in the medium (5%) and the lowest in the absence of phosphates and nitrates (1.3–1.5%), but the absolute content in dry biomass was similar in all variants of the experiment (6.5–9.3 mg g−1 dry weight). The absence of nitrogen and both nitrogen and phosphorus led to a 3–fold increase in TFA in comparison with the control. Thus, this strain can be considered in biotechnological application as a potential producer of the essential linoleic acid or oleic acid

Inter-subunit interactions that coordinate Rad51's activities

Rad51 is the central catalyst of homologous recombination in eukaryotes and is thus critical for maintaining genomic integrity. Recent crystal structures of filaments formed by Rad51 and the closely related archeal RadA and eubacterial RecA proteins place the ATPase site at the protomeric interface. To test the relevance of this feature, we mutated conserved residues at this interface and examined their effects on key activities of Rad51: ssDNA-stimulated ATP hydrolysis, DNA binding, polymerization on DNA substrates and catalysis of strand-exchange reactions. Our results show that the interface seen in the crystal structures is very important for nucleoprotein filament formation. H352 and R357 of yeast Rad51 are essential for assembling the catalytically competent form of the enzyme on DNA substrates and coordinating its activities. However, contrary to some previous suggestions, neither of these residues is critical for ATP hydrolysis

Biogéographie des cyanobactéries terrestres des zones déglacées en Antarctique

Cyanobacteria inhabit the Antarctic continent and have even been observed in the most southerly ice-free areas of Antarctica (86–878 S). The highest molecular diversity of cyanobacterial communities was found in the areas located between 708 S and 808 S. Further south and further north from this zone, the diversity abruptly decreased. Seventy-nine per cent (33 of 42 operational taxonomic units) of Antarctic terrestrial cyanobacteria have a cosmopolitan distribution. Analysis of the sampling efforts shows that only three regions (southern Victoria Land, the Sør Rondane Mountains and Alexander Island) have been particularly well studied, while other areas did not receive enough attention. Although cyanobacteria possess a capacity for long-range transport, regional populations in Antarctic ice-free areas seem to exist. The cyanobacterial communities of the three most intensively studied regions, separated from each other by a distance of 3000–3400 km, had a low degree of similarity with each other. Further development of microbial biogeography demands a standardized approach. For this purpose, as a minimal standard, we suggest using the sequence of cyanobacterial 16S rRNA gene between Escherichia coli positions 405–780.BIPOLE