A genotypic trade-off between constitutive resistance to viral infection and host growth rate

This is the final version. Available on open access from Wiley via the DOI in this record.All data used in this study are made available in the supplementary informationGenotypic trade-offs are fundamental to the understanding of the evolution of life-history traits. In particular, the evolution of optimal host defence and the maintenance of variation in defence against infectious disease is thought to be underpinned by such evolutionary trade-offs. However, empirical demonstrations of these trade-offs that satisfy the strict assumptions made by theoretical models are rare. Additionally, none of these trade-offs have yet been shown to be robustly replicable using a variety of different experimental approaches to rule out confounding issues with particular experimental designs. Here, we use inbred isolines as a novel experimental approach to test whether a trade-off between viral resistance and growth rate in Plodia interpunctella, previously demonstrated by multiple selection experiments, is robust and meets the strict criteria required to underpin theoretical work in this field. Critically, we demonstrate that this trade-off is both genetic and constitutive. This finding helps support the large body of theory which relies on these assumptions, and makes this trade-off for resistance unique in being replicated through multiple experimental approaches and definitively shown to be genetic and constitutive

Trypanosomatids are common and diverse parasites of Drosophila

SUMMARYDrosophila melanogasteris an important model system of immunity and parasite resistance, yet most studies use parasites that do not naturally infect this organism. We have studied trypanosomatids in natural populations to assess the prevalence and diversity of these gut parasites. We collected several species ofDrosophilafrom Europe and surveyed them for trypanosomatids using conserved primers for two genes. We have used the conserved GAPDH sequence to construct a phylogenetic tree and the highly variable spliced leader RNA to assay genetic diversity. All 5 of the species that we examined were infected, and the average prevalence ranged from 1 to 6%. There are several different groups of trypanosomatids, related to other monoxenous Trypanosomatidae. These may represent new trypanosomatid species and were found in different species of EuropeanDrosophilafrom different geographical locations. The detection of a little studied natural pathogen inD. melanogasterand related species provides new opportunities for research into both theDrosophilaimmune response and the evolution of hosts and parasites.</jats:p

Host density drives viral, but not trypanosome, transmission in a key pollinator

Supplemental feeding of wildlife populations can locally increase the density of individuals, which may in turn impact disease dynamics. Flower strips are a widely used intervention in intensive agricultural systems to nutritionally support pollinators such as bees. Using a controlled experimental semi-field design, we asked how density impacts transmission of a virus and a trypanosome parasite in bumblebees. We manipulated bumblebee density by using different numbers of colonies within the same area of floral resource. In high-density compartments, slow bee paralysis virus was transmitted more quickly, resulting in higher prevalence and level of infection in bumblebee hosts. By contrast, there was no impact of density on the transmission of the trypanosome Crithidia bombi, which may reflect the ease with which this parasite is transmitted. These results suggest that agri-environment schemes such as flower strips, which are known to enhance the nutrition and survival of bumblebees, may also have negative impacts on pollinators through enhanced disease transmission. Future studies should assess how changing the design of these schemes could minimize disease transmission and thus maximise their health benefits to wild pollinators

Evidence for ADAR-induced hypermutation of the Drosophila sigma virus (Rhabdoviridae).

BACKGROUND: ADARs are RNA editing enzymes that target double stranded RNA and convert adenosine to inosine, which is read by translation machinery as if it were guanosine. Aside from their role in generating protein diversity in the central nervous system, ADARs have been implicated in the hypermutation of some RNA viruses, although why this hypermutation occurs is not well understood. RESULTS: Here we describe the hypermutation of adenosines to guanosines in the genome of the sigma virus--a negative sense RNA virus that infects Drosophila melanogaster. The clustering of these mutations and the context in which they occur indicates that they have been caused by ADARs. However, ADAR-editing of viral RNA is either rare or edited viral RNA are rapidly degraded, as we only detected evidence for editing in two of the 104 viral isolates we studied. CONCLUSION: This is the first evidence for ADARs targeting viruses outside of mammals, and it raises the possibility that ADARs could play a role in the antiviral defences of insects.RIGHTS : This article is licensed under the BioMed Central licence at http://www.biomedcentral.com/about/license which is similar to the 'Creative Commons Attribution Licence'. In brief you may : copy, distribute, and display the work; make derivative works; or make commercial use of the work - under the following conditions: the original author must be given credit; for any reuse or distribution, it must be made clear to others what the license terms of this work are

Construction and characterization of a BAC-library for a key pollinator, the bumblebee Bombus terrestris L

Abstract.: The primitively social bumblebee Bombus terrestris is an ecological model species as well as an important agricultural pollinator. As part of the ongoing development of genomic resources for this model organism, we have constructed a publicly available bacterial artificial chromosome (BAC) library from males of a field-derived colony. We have shown that this library has a high coverage, which allows any particular sequence to be retrieved from at least one clone with a probability of 99.7%. We have further demonstrated the library's usefulness by successfully screening it with probes derived both from previously described B. terrestris genes and candidate genes from another bumblebee species and the honeybee. This library will facilitate genomic studies in B. terrestris and will allow for novel comparative studies in the social Hymenopter

Industrial bees: the impact of apicultural intensification on local disease 1 prevalence

This is the author accepted manuscript. The final version is available from Wiley via the DOI in this record.1) It is generally thought that the intensification of farming will result in higher disease prevalences, although there is little specific modelling testing this idea. Focussing on honeybees, we build multi18 colony models to inform how ‘apicultural intensification’ is predicted to impact honeybee pathogen epidemiology at the apiary scale. 2) We used both agent-based and analytical models to show that three linked aspects of apicultural intensification (increased population sizes, changes in population network structure, and increased between-colony transmission) are unlikely to greatly increase disease prevalence in apiaries. Principally this is because even low-intensity apiculture exhibits high disease prevalence. 3) The greatest impacts of apicultural intensification are found for diseases with relatively low R0 (basic reproduction number), however, such diseases cause little overall disease prevalence and therefore the impacts of intensification are minor. Furthermore, the smallest impacts of intensification are for diseases with high R0 values, which we argue are typical of important honeybee diseases. 4) Policy Implications: Our findings contradict the idea that apicultural intensification by crowding honeybee colonies in large, dense apiaries leads to notably higher disease prevalences for established honeybee pathogens. More broadly, our work demonstrates the need for informative models of all agricultural systems and management practices in order to understand the implications of management changes on diseasesBiotechnology & Biological Sciences Research Council (BBSRC

Observation of tunable single-atom Yu-Shiba-Rusinov states

The coupling of a spin to an underlying substrate is the basis for a plethora of phenomena. In the case of a metallic substrate, Kondo screening of the adatom magnetic moment can occur. As the substrate turns superconducting, an intriguing situation emerges where the pair breaking due to the adatom spins leads to Yu-Shiba-Rusinov bound states, but also intertwines with Kondo phenomena. Through scanning tunneling spectroscopy, we analyze the interdependence of Kondo screening and superconductivity. Our data obtained on single Fe adatoms on Nb(110) show that the coupling and the resulting YSR states are strongly adsorption site-dependent and reveal a quantum phase transition at a Kondo temperature comparable to the superconducting gap. The experimental signatures are rationalized by combined density functional theory and continuous-time quantum Monte-Carlo calculations to rigorously treat magnetic and hybridization effects on equal footing.Comment: 6 pages, 4 figure

Disease association mapping in Drosophila can be replicated in the wild

Association and linkage mapping have become important tools in understanding the genetics of complex traits, including diseases in humans. As the success of association mapping is reduced by small effect sizes and limited power, linkage studies in laboratory-based model systems are still heavily used. But whether the results of these studies can be replicated in natural populations has been questioned. Here, we show that a polymorphism in the gene ref(2)P, which had previously been linked to sigma virus resistance in Drosophila melanogaster under laboratory conditions, also provides resistance against the virus in female flies in a wild population in the field. This genetic association is thus upheld in spite of a known genotype-by-genotype interaction and environmental variation