14 research outputs found
Diffusive and localization behavior of electromagnetic waves in a two-dimensional random medium
In this paper, we discuss the transport phenomena of electromagnetic waves in
a two-dimensional random system which is composed of arrays of electrical
dipoles, following the model presented earlier by Erdogan, et al. (J. Opt. Soc.
Am. B {\bf 10}, 391 (1993)). A set of self-consistent equations is presented,
accounting for the multiple scattering in the system, and is then solved
numerically. A strong localization regime is discovered in the frequency
domain. The transport properties within, near the edge of and nearly outside
the localization regime are investigated for different parameters such as
filling factor and system size. The results show that within the localization
regime, waves are trapped near the transmitting source. Meanwhile, the
diffusive waves follow an intuitive but expected picture. That is, they
increase with travelling path as more and more random scattering incurs,
followed by a saturation, then start to decay exponentially when the travelling
path is large enough, signifying the localization effect. For the cases that
the frequencies are near the boundary of or outside the localization regime,
the results of diffusive waves are compared with the diffusion approximation,
showing less encouraging agreement as in other systems (Asatryan, et al., Phys.
Rev. E {\bf 67}, 036605 (2003).)Comment: 8 pages 9 figure
Increased expression of Interleukin-6 related to nephritis in chickens challenged with an Avian infectious bronchitis virus variant
Effect of Intraperitoneal Administration of Zinc on C57/6J Mouse Liver-A Light Microscopic Study
Okajimas Folia Anatomica Japonica746279-292OFAJ
Nucleotide sequence variations of the major structural proteins (VP15, VP19, VP26 and VP28) of white spot syndrome virus (WSSV), a pathogen of cultured Litopenaeus vannamei in Mexico
Transcriptional analysis of the ribonucleotide reductase genes in shrimp white spot syndrome virus
The causative agent of white spot syndrome (WSS) is a large double-stranded DNA virus, WSSV, which is probably a representative of a new genus, provisionally called Whispovirus. From previously constructed WSSV genomic libraries of a Taiwan WSSV isolate, clones with open reading frames (ORFs) that encode proteins with significant homology to the class I ribonucleotide reductase large (RR1) and small (RR2) subunits were identified. WSSV rr1 and rr2 potentially encode 848 and 413 amino acids, respectively. RNA was isolated from WSSV-infected shrimp at different times after infection and Northern blot analysis with rr1- and rr2-specific riboprobes found major transcripts of 2.8 and 1.4 kb, respectively. 5′ RACE showed that the major rr1 transcript started at a position of −84 (C) relative to the ATG translational start, while transcription of the rr2 gene started at nucleotide residue −68 (T). A consensus motif containing the transcriptional start sites for rr1 and rr2 was observed (TCAc/tTC). Northern blotting and RT-PCR showed that the transcription of rr1 and rr2 started 4–6 h after infection and continued for at least 60 h. The rr1 and rr2 genes thus appear to be WSSV "early genes.
Global circulation of slowly evolving trichodysplasia spinulosa-associated polyomavirus and its adaptation to the human population through alternative T antigens
Molecular basis of virus replication, viral pathogenesis and antiviral strategie
Neuronal data analysis based on the empirical cumulative entropy
We propose the empirical cumulative entropy as a variability measure suitable to describe the information content in neuronal firing data. Some useful characteristics and an application to a real dataset are also discussed
Molecular cloning and recombinant expression of the VP28 carboxyl-terminal hydrophilic region from a brazilian white spot syndrome virus isolate
In the present study, a fragment of the VP28 coding sequence from a Brazilian WSSV isolate (BrVP28) was cloned, sequenced and expressed in E. coli BL21(DE3) pLysS strain in order to produce the VP28 carboxyl-terminal hydrophilic region. The expression resulted in a protein of about 21 kDa, which was purified under denaturing conditions, resulting in a final highly purified BrVP28 preparation. The recombinant protein obtained can be used in several biotechnology applications, such as the production of monoclonal antibodies which could be used in the development of diagnostic tools as well as in the studies on the characterization of white spot syndrome virus (WSSV) isolated in Brazil
Limited variation during circulation of a polyomavirus in the human population involves the COCO-VA toggling site of Middle and Alternative T-antigen(s)
We have recently shown that the trichodysplasia spinulosa-associated polyomavirus (TSPyV) belongs to a large monophyletic group of mammalian polyomaviruses that experienced accelerated codon-constrained Val-Ala (COCO-VA) toggling at a protein site common to both Middle and Alternative T-antigens (MT/ALTO). Here we analyzed thirteen, mostly newly sequenced TSPyV genomes, representing ~40% of reported TS disease cases world-wide. We found two deletions and 30 variable sites (≤0.6%) that included only four sites with non-synonymous substitutions (NSS). One NSS site was under positive selection in the exon shared by Small and Middle T antigens, while three others were segregated in MT/ALTO. Two MT/ALTO sites covaried with five sites elsewhere in the genome and determined separation of twelve TSPyVs into two most populous phylogenetic lineages. The other, most distant TSPyV was distinguished by NSS at the COCO-VA site, observed for the first time during intra-species evolution. Our findings reveal a connection between micro- and macro-evolution of polyomaviruses