3,254 research outputs found
The effects of isometric work on heart rate, blood pressure, and net oxygen cost
Isometric exercise effects on heart rate, blood pressure, and net oxygen cos
Genetic analysis of safflower domestication.
BackgroundSafflower (Carthamus tinctorius L.) is an oilseed crop in the Compositae (a.k.a. Asteraceae) that is valued for its oils rich in unsaturated fatty acids. Here, we present an analysis of the genetic architecture of safflower domestication and compare our findings to those from sunflower (Helianthus annuus L.), an independently domesticated oilseed crop within the same family.We mapped quantitative trait loci (QTL) underlying 24 domestication-related traits in progeny from a cross between safflower and its wild progenitor, Carthamus palaestinus Eig. Also, we compared QTL positions in safflower against those that have been previously identified in cultivated x wild sunflower crosses to identify instances of colocalization.ResultsWe mapped 61 QTL, the vast majority of which (59) exhibited minor or moderate phenotypic effects. The two large-effect QTL corresponded to one each for flower color and leaf spininess. A total of 14 safflower QTL colocalized with previously reported sunflower QTL for the same traits. Of these, QTL for three traits (days to flower, achene length, and number of selfed seed) had cultivar alleles that conferred effects in the same direction in both species.ConclusionsAs has been observed in sunflower, and unlike many other crops, our results suggest that the genetics of safflower domestication is quite complex. Moreover, our comparative mapping results indicate that safflower and sunflower exhibit numerous instances of QTL colocalization, suggesting that parallel trait transitions during domestication may have been driven, at least in part, by parallel genotypic evolution at some of the same underlying genes
Near Infrared Spectra of Type Ia Supernovae
We report near infrared (NIR) spectroscopic observations of twelve
``Branch-normal'' Type Ia supernovae (SNe Ia) which cover the wavelength region
from 0.8-2.5 microns. Our sample more than doubles the number of SNe Ia with
published NIR spectra within three weeks of maximum light. The epochs of
observation range from thirteen days before maximum light to eighteen days
after maximum light. A detailed model for a Type Ia supernovae is used to
identify spectral features. The Doppler shifts of lines are measured to obtain
the velocity and, thus, the radial distribution of elements.
The NIR is an extremely useful tool to probe the chemical structure in the
layers of SNe Ia ejecta. This wavelength region is optimal for examining
certain products of the SNe Ia explosion that may be blended or obscured in
other spectral regions. We identify spectral features from MgII, CaII, SiII,
FeII, CoII, NiII and possibly MnII. We find no indications for hydrogen, helium
or carbon in the spectra. The spectral features reveal important clues about
the physical characteristics of SNe Ia. We use the features to derive upper
limits for the amount of unburned matter, to identify the transition regions
from explosive carbon to oxygen burning and from partial to complete silicon
burning, and to estimate the level of mixing during and after the explosion.Comment: 44 pages, 7 figures, 3 tables, accepted by Ap
Alignment of patient and primary care practice member perspectives of chronic illness care: a cross-sectional analysis
Polly H. Noel and Luci K. Leykum are with the South Texas Veterans Health Care System, 7400 Merton Minter Blvd, San Antonio, TX 78229, USA -- Polly H. Noel, Ray F. Palmer, Raquel L. Romero, Luci K. Leykum, Holly J. Lanham, and Krista W. Bowers are with the Department of Medicine, University of Texas Health Science Center at San Antonio, 7703 Floyd Curl Dr, San Antonio, TX 78229, USA -- Michael L. Parchman is with the MacColl Center for Healthcare Innovation, Group Health Research Institute, Group Health Cooperative, 1730 Minor Ave 1600, Seattle, WA 98101, USA -- Holly J. Leykum is with the The McCombs School of Business, The University of Texas at Austin, 2110 Speedway, Stop B6000, Austin, TX 78712, USA -- John E. Zeber is with the Central Texas Veterans Health Care System, 1901 S. 1st St, Temple, TX 76504, USA and Scott and White Healthcare Center for Applied Health Research, 2401 S. 31st St, Temple, TX 76508, USABackground: Little is known as to whether primary care teams’ perceptions of how well they have implemented the Chronic Care Model (CCM) corresponds with their patients’ own experience of chronic illness care. We examined the extent to which practice members’ perceptions of how well they organized to deliver care consistent with the CCM were associated with their patients’ perceptions of the chronic illness care they have received. Methods: Analysis of baseline measures from a cluster randomized controlled trial testing a practice facilitation intervention to implement the CCM in small, community-based primary care practices. All practice “members” (i.e., physician providers, non-physician providers, and staff) completed the Assessment of Chronic Illness Care (ACIC) survey and adult patients with 1 or more chronic illnesses completed the Patient Assessment of Chronic Illness Care (PACIC) questionnaire. Results: Two sets of hierarchical linear regression models accounting for nesting of practice members (N = 283) and patients (N = 1,769) within 39 practices assessed the association between practice member perspectives of CCM implementation (ACIC scores) and patients’ perspectives of CCM (PACIC). ACIC summary score was not significantly associated with PACIC summary score or most of PACIC subscale scores, but four of the ACIC subscales were consistently associated with PACIC summary score and the majority of PACIC subscale scores after controlling for patient characteristics. The magnitude of the coefficients, however, indicates that the level of association is weak. Conclusions: The ACIC and PACIC scales appear to provide complementary and relatively unique assessments of how well clinical services are aligned with the CCM. Our findings underscore the importance of assessing both patient and practice member perspectives when evaluating quality of chronic illness care.Information, Risk, and Operations Management (IROM)[email protected]
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Pre-Amplifier Module for Laser Inertial Confinement Fusion
The Pre-Amplifier Modules (PAMs) are the heart of the National Ignition Facility (NIF), providing most of the energy gain for the most energetic laser in the world. Upon completion, NIF will be the only laboratory in which scientists can examine the fusion processes that occur inside stars, supernovae, and exploding nuclear weapons and that may someday serve as a virtually inexhaustible energy source for electricity. Consider that in a fusion power plant 50 cups of water could provide the energy comparable to 2 tons of coal. Of paramount importance for achieving laser-driven fusion ignition with the least energy input is the synchronous and symmetric compression of the target fuel--a condition known as laser power balance. NIF's 48 PAMs thus must provide energy gain in an exquisitely stable and consistent manner. While building one module that meets performance requirements is challenging enough, our design has already enabled the construction and fielding of 48 PAMs that are stable, uniform, and interchangeable. PAM systems are being tested at the University of Rochester's Laboratory for Laser Energetics, and the Atomic Weapons Enterprise of Great Britain has purchased the PAM power system
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Complementary Metagenomic Approaches Improve Reconstruction of Microbial Diversity in a Forest Soil.
Soil ecosystems harbor diverse microorganisms and yet remain only partially characterized as neither single-cell sequencing nor whole-community sequencing offers a complete picture of these complex communities. Thus, the genetic and metabolic potential of this "uncultivated majority" remains underexplored. To address these challenges, we applied a pooled-cell-sorting-based mini-metagenomics approach and compared the results to bulk metagenomics. Informatic binning of these data produced 200 mini-metagenome assembled genomes (sorted-MAGs) and 29 bulk metagenome assembled genomes (MAGs). The sorted and bulk MAGs increased the known phylogenetic diversity of soil taxa by 7.2% with respect to the Joint Genome Institute IMG/M database and showed clade-specific sequence recruitment patterns across diverse terrestrial soil metagenomes. Additionally, sorted-MAGs expanded the rare biosphere not captured through MAGs from bulk sequences, exemplified through phylogenetic and functional analyses of members of the phylum Bacteroidetes Analysis of 67 Bacteroidetes sorted-MAGs showed conserved patterns of carbon metabolism across four clades. These results indicate that mini-metagenomics enables genome-resolved investigation of predicted metabolism and demonstrates the utility of combining metagenomics methods to tap into the diversity of heterogeneous microbial assemblages.IMPORTANCE Microbial ecologists have historically used cultivation-based approaches as well as amplicon sequencing and shotgun metagenomics to characterize microbial diversity in soil. However, challenges persist in the study of microbial diversity, including the recalcitrance of the majority of microorganisms to laboratory cultivation and limited sequence assembly from highly complex samples. The uncultivated majority thus remains a reservoir of untapped genetic diversity. To address some of the challenges associated with bulk metagenomics as well as low throughput of single-cell genomics, we applied flow cytometry-enabled mini-metagenomics to capture expanded microbial diversity from forest soil and compare it to soil bulk metagenomics. Our resulting data from this pooled-cell sorting approach combined with bulk metagenomics revealed increased phylogenetic diversity through novel soil taxa and rare biosphere members. In-depth analysis of genomes within the highly represented Bacteroidetes phylum provided insights into conserved and clade-specific patterns of carbon metabolism
Extended polarized semiclassical model for quantum-dot cavity QED and its application to single-photon sources
We present a simple extension of the semi-classical model for a two-level
system in a cavity, in order to incorporate multiple polarized transitions,
such as those appearing in neutral and charged quantum dots (QDs), and two
nondegenerate linearly polarized cavity modes. We verify the model by exact
quantum master equation calculations, and experimentally using a neutral QD in
a polarization non-degenerate micro-cavity, in both cases we observe excellent
agreement. Finally, the usefulness of this approach is demonstrated by
optimizing a single-photon source based on polarization postselection, where we
find an increase in the brightness for optimal polarization conditions as
predicted by the model.Comment: 8 pages, for simple code see https://doi.org/10.5281/zenodo.347666
The Bolocam Galactic Plane Survey. XIV. Physical Properties of Massive Starless and Star Forming Clumps
We sort molecular clouds between from the
Bolocam Galactic Plane Survey based on observational diagnostics of star
formation activity: compact sources, mid-IR color-selected
YSOs, and masers, and UCHII regions. We also
present a combined -derived gas kinetic temperature and maser catalog for clumps from our own GBT 100m observations and
from the literature. We identify a subsample of () starless
clump candidates, the largest and most robust sample identified from a blind
survey to date. Distributions of flux density, flux concentration, solid angle,
kinetic temperature, column density, radius, and mass show strong ( dex)
progressions when sorted by star formation indicator. The median starless clump
candidate is marginally sub-virial () with of clumps
with known distance being gravitationally bound (). These samples
show a statistically significant increase in the median clump mass of M from the starless candidates to clumps associated with
protostars. This trend could be due to (i) mass growth of the clumps at
Msun Myr for an average free-fall Myr
time-scale, (ii) a systematic factor of two increase in dust opacity from
starless to protostellar phases, (iii) and/or a variation in the ratio of
starless to protostellar clump lifetime that scales as . By
comparing to the observed number of maser containing clumps we
estimate the phase-lifetime of massive ( M) starless clumps to
be ; the majority
( M) have phase-lifetimes longer than their average free-fall
time.Comment: Accepted for publication in ApJ; 33 pages; 22 figures; 7 table
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