Tectonic insights of the southwest Amazon Craton from geophysical, geochemical and mineralogical data of Figueira Branca mafic-ultramafic suite, Brazil

This work was done with the support of the CNPq, National Council for Technological and Scientific Development – Brazil [grant numbers 443355/2014-2, 200473/2015-8, 141587/2013-0]; Peter A. Cawood acknowledges support from the Australian Research Council [grant number FL160100168].The Figueira Branca Suite is a layered mafic-ultramafic complex in the Jauru Terrane, southwest Amazon Craton. New lithological, geochemical, gamma-ray and potential field data, integrated with geological, isotope and paleomagnetic data are used to characterize this pulse of Mesoproterozoic extension-related magmatism. The Figueira Branca Suite formed through juvenile magma emplacement into the crust at 1425 Ma, coeval with the later stages of the Santa Helena Orogen. Gabbros and peridotite-gabbros display increasing enrichment of LREE, interpreted as evidence of progressive fractionation of the magma. Magnetic and gamma-ray data delimit the extent of magmatism within the suite to four bodies to the north of Indiavaí city. Modelling gravity and magnetic field data indicate that the anomalous sources are close to the surface or outcropping. These intrusions trend northwest over 8 km, with significant remanent magnetization that is consistent with published direction obtained through paleomagnetic data. The emplacement, mineralogy and geochemical signature point towards a back-arc extension tectonic framework in the later stages of the Santa Helena Orogen.PostprintPeer reviewe

A nested loop for simultaneous model topology screening, parameters estimation, and identification of the optimal number of experiments: Application to a Simulated Moving Bed unit

Simulated Moving Bed (SMB) chromatography is a well-known technique for the resolution of several high-value-added compounds. Parameters identification and model topology definition are arduous when one is dealing with complex systems such as a Simulated Moving Bed unit. Moreover, the large number of experiments necessary might be an expansive-long process. Hence, this work proposes a novel methodology for parameter estimation, screening the most suitable topology of the models sink-source (defined by the adsorption isotherm equation) and defining the minimum number of experiments necessary to identify the model. Therefore, a nested loop optimization problem is proposed with three levels considering the three main goals of the work: parameters estimation; topology screening by isotherm definition; minimum number of experiments necessary to yield a precise model. The proposed methodology emulated a real scenario by introducing noise in the data and using a Software-in-the-Loop (SIL) approach. Data reconciliation and uncertainty evaluation add robustness to the parameter estimation adding precision and reliability to the model. The methodology is validated considering experimental data from literature apart from the samples applied for parameter estimation, following a cross-validation. The results corroborate that it is possible to carry out trustworthy parameter estimation directly from an SMB unit with minimal system knowledge

Nycthemeral and Monthly Occupation of the Fish Assemblage on a Sheltered Beach of Baía Norte, Florianópolis, Santa Catarina State, Brazil

Interpreting fish community records is challenging for several reasons, including the lack of past ichthyofauna data, the cyclical temporal variations in the community, and the methodology employed, which usually underestimates fish assemblages. The objective of this study was to describe short-scale and meso-scale (nycthemeral period and months, respectively) temporal variations in the ichthyofauna composition and structure of a sheltered beach of Baía Norte (Florianópolis, Santa Catarina state, Brazil), using a capéchade net. Samples were collected monthly for a period of 48 hours. During the period from December 2010 to November 2011, a total of 19,302 individuals belonging to 89 species and 39 families were captured. The number of individuals that were sampled during the day and/or night was dependent on the sampling month. On average, the daytime assemblage was more abundant and different in structure and composition than the nighttime assemblage. Of the eight species that had the highest Index of Relative Importance (%IRI), five had higher variations (ANOVA F) between the day and night than between the months. This finding reinforced the need for sampling during both the day and night. The capéchade net effectively captured demersal and pelagic individuals in a broad range of sizes

The Genomic Ancestry of Individuals from Different Geographical Regions of Brazil Is More Uniform Than Expected

Based on pre-DNA racial/color methodology, clinical and pharmacological trials have traditionally considered the different geographical regions of Brazil as being very heterogeneous. We wished to ascertain how such diversity of regional color categories correlated with ancestry. Using a panel of 40 validated ancestry-informative insertion-deletion DNA polymorphisms we estimated individually the European, African and Amerindian ancestry components of 934 self-categorized White, Brown or Black Brazilians from the four most populous regions of the Country. We unraveled great ancestral diversity between and within the different regions. Especially, color categories in the northern part of Brazil diverged significantly in their ancestry proportions from their counterparts in the southern part of the Country, indicating that diverse regional semantics were being used in the self-classification as White, Brown or Black. To circumvent these regional subjective differences in color perception, we estimated the general ancestry proportions of each of the four regions in a form independent of color considerations. For that, we multiplied the proportions of a given ancestry in a given color category by the official census information about the proportion of that color category in the specific region, to arrive at a “total ancestry” estimate. Once such a calculation was performed, there emerged a much higher level of uniformity than previously expected. In all regions studied, the European ancestry was predominant, with proportions ranging from 60.6% in the Northeast to 77.7% in the South. We propose that the immigration of six million Europeans to Brazil in the 19th and 20th centuries - a phenomenon described and intended as the “whitening of Brazil” - is in large part responsible for dissipating previous ancestry dissimilarities that reflected region-specific population histories. These findings, of both clinical and sociological importance for Brazil, should also be relevant to other countries with ancestrally admixed populations

New species of Hasemania (Characiformes: Characidae) from Central Brazil, with comments on the endemism of upper rio Tocantins basin, Goiás State

Hasemania kalunga é descrita para a bacia do alto rio Tocantins, Chapada dos Veadeiros, Goiás, Brasil. A espécie nova distingue-se das suas congêneres pelo número de escamas perfuradas da linha lateral (11-21 vs. 5-9, exceto de H. crenuchoides e H. piatan), pela presença de uma mancha umeral preta e verticalmente alongada (vs. ausência, exceto de H. crenuchoides, H. nambiquara e H. piatan), e pela ausência de escamas na base da nadadeira anal (vs. presença, exceto de H. maxillaris e H. piatan), por 19 raios principais na nadadeira caudal (vs.18 em H. piatan). Ela também difere de H. crenuchoides por dados morfométricos. A ausência de uma bainha de escamas cobrindo a base da nadadeira anal, um caráter incomum em Characidae, e o endemismo da ictiofauna do alto rio Tocantins são discutidos.Hasemania kalunga is described from the upper rio Tocantins basin, Chapada dos Veadeiros, Goiás State, Brazil. The new species is distinguished from its congeners by the number of perforated lateral line scales (11-21 vs. 5-9, except from H. crenuchoides and H. piatan), by the presence of a black vertically-elongate humeral spot (vs. absent, except from H. crenuchoides, H. nambiquara, and H. piatan), and by absence of scale sheath along anal-fin base (vs. presence, except from H. maxillaris, and H. piatan), by 19 principal caudal-fin rays (vs. 18 in H. piatan). It differs also from H. crenuchoides by morphometric data. The absence of scale sheath covering the anal-fin base, an uncommon character in Characidae, and the endemism of the ichthyofauna from the upper rio Tocantins are discussed

Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains

Ruiz JC, D'Afonseca V, Silva A, et al. Evidence for Reductive Genome Evolution and Lateral Acquisition of Virulence Functions in Two Corynebacterium pseudotuberculosis Strains. PLoS ONE. 2011;6(4): e18551.Background: Corynebacterium pseudotuberculosis, a Gram-positive, facultative intracellular pathogen, is the etiologic agent of the disease known as caseous lymphadenitis (CL). CL mainly affects small ruminants, such as goats and sheep; it also causes infections in humans, though rarely. This species is distributed worldwide, but it has the most serious economic impact in Oceania, Africa and South America. Although C. pseudotuberculosis causes major health and productivity problems for livestock, little is known about the molecular basis of its pathogenicity. Methodology and Findings: We characterized two C. pseudotuberculosis genomes (Cp1002, isolated from goats; and CpC231, isolated from sheep). Analysis of the predicted genomes showed high similarity in genomic architecture, gene content and genetic order. When C. pseudotuberculosis was compared with other Corynebacterium species, it became evident that this pathogenic species has lost numerous genes, resulting in one of the smallest genomes in the genus. Other differences that could be part of the adaptation to pathogenicity include a lower GC content, of about 52%, and a reduced gene repertoire. The C. pseudotuberculosis genome also includes seven putative pathogenicity islands, which contain several classical virulence factors, including genes for fimbrial subunits, adhesion factors, iron uptake and secreted toxins. Additionally, all of the virulence factors in the islands have characteristics that indicate horizontal transfer. Conclusions: These particular genome characteristics of C. pseudotuberculosis, as well as its acquired virulence factors in pathogenicity islands, provide evidence of its lifestyle and of the pathogenicity pathways used by this pathogen in the infection process. All genomes cited in this study are available in the NCBI Genbank database (http://www.ncbi.nlm.nih.gov/genbank/) under accession numbers CP001809 and CP001829