4,775 research outputs found

    Whale Sharks Associated with Fish Schools off South Texas

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    Equiangular tight frames and fourth root seidel matrices

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    AbstractIn this paper we construct complex equiangular tight frames (ETFs). In particular, we study the grammian associated with an ETF whose off-diagonal entries consist entirely of fourth roots of unity. These ETFs are classified, and we also provide some computational techniques which give rise to previously undiscovered ETFs

    Evidence for ACTN3 as a genetic modifier of Duchenne muscular dystrophy

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    Duchenne muscular dystrophy (DMD) is characterized by muscle degeneration and progressive weakness. There is considerable inter-patient variability in disease onset and progression, which can confound the results of clinical trials. Here we show that a common null polymorphism (R577X) in ACTN3 results in significantly reduced muscle strength and a longer 10\u2009m walk test time in young, ambulant patients with DMD; both of which are primary outcome measures in clinical trials. We have developed a double knockout mouse model, which also shows reduced muscle strength, but is protected from stretch-induced eccentric damage with age. This suggests that \u3b1-actinin-3 deficiency reduces muscle performance at baseline, but ameliorates the progression of dystrophic pathology. Mechanistically, we show that \u3b1-actinin-3 deficiency triggers an increase in oxidative muscle metabolism through activation of calcineurin, which likely confers the protective effect. Our studies suggest that ACTN3 R577X genotype is a modifier of clinical phenotype in DMD patients

    Space Applications of Mass Spectrometry

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    Mass spectrometers have been involved in essentially all aspects of space exploration. This chapter outlines some of these many uses. Mass spectrometers have not only helped to expand our knowledge and understanding of the world and solar system around us, they have helped to put man safely in space and expand our frontier. Mass spectrometry continues to prove to be a very reliable, robust, and flexible analytical instrument, ensuring that its use will continue to help aid our investigation of the universe and this small planet that we call home

    Human papillomavirus, p16 and p53 expression associated with survival of head and neck cancer

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    BACKGROUND: P16 and p53 protein expression, and high-risk human papillomavirus (HPV-HR) types have been associated with survival in head and neck cancer (HNC). Evidence suggests that multiple molecular pathways need to be targeted to improve the poor prognosis of HNC. This study examined the individual and joint effects of tumor markers for differences in predicting HNC survival. P16 and p53 expression were detected from formalin-fixed, paraffin-embedded tissues by immunohistochemical staining. HPV DNA was detected by PCR and DNA sequencing in 237 histologically confirmed HNC patients. RESULTS: Overexpression of p16 (p16+) and p53 (p53+) occurred in 38% and 48% of HNC tumors, respectively. HPV-HR was detected in 28% of tumors. Worse prognosis was found in tumors that were p53+ (disease-specific mortality: adjusted hazard ratios, HR = 1.9, 95% CI: 1.04-3.4) or HPV- (overall survival: adj. HR = 2.1, 1.1-4.3) but no association in survival was found by p16 status. Compared to the molecular marker group with the best prognosis (p16+/p53-/HPV-HR: referent), the p16-/p53+/HPV- group had the lowest overall survival (84% vs. 60%, p < 0.01; HR = 4.1, 1.7-9.9) and disease-specific survival (86% vs. 66%, p < 0.01; HR = 4.0, 1.5-10.7). Compared to the referent, the HRs of the other six joint biomarker groups ranged from 1.6-3.4 for overall mortality and 0.9-3.9 for disease-specific mortality. CONCLUSION: The p16/p53/HPV joint groups showed greater distinction in clinical outcomes compared to results based on the individual biomarkers alone. This finding suggests that assessing multiple molecular markers in HNC patients will better predict the diverse outcomes and potentially the type of treatment targeted to those markers

    Invariance and plasticity in the Drosophila melanogaster metabolomic network in response to temperature

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    BACKGROUND: Metabolomic responses to extreme thermal stress have recently been investigated in Drosophila melanogaster. However, a network level understanding of metabolomic responses to longer and less drastic temperature changes, which more closely reflect variation in natural ambient temperatures experienced during development and adulthood, is currently lacking. Here we use high-resolution, non-targeted metabolomics to dissect metabolomic changes in D. melanogaster elicited by moderately cool (18°C) or warm (27°C) developmental and adult temperature exposures. RESULTS: We find that temperature at which larvae are reared has a dramatic effect on metabolomic network structure measured in adults. Using network analysis, we are able to identify modules that are highly differentially expressed in response to changing developmental temperature, as well as modules whose correlation structure is strongly preserved across temperature. CONCLUSIONS: Our results suggest that the effect of temperature on the metabolome provides an easily studied and powerful model for understanding the forces that influence invariance and plasticity in biological networks. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12918-014-0139-6) contains supplementary material, which is available to authorized users

    Direct neutron capture cross sections of 62Ni in the s-process energy range

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    Direct neutron capture on 62Ni is calculated in the DWBA and the cross sections in the energy range relevant for s-process nucleosynthesis are given. It is confirmed that the thermal value of the capture cross section contains a subthreshold resonance contribution. Contrary to previous investigations it is found that the capture at higher energies is dominated by p-waves, thus leading to a considerably increased cross section at s-process energies and a modified energy dependence.Comment: 10 pages, 1 figure, corrected typos in Eq. 6 and subsequent paragrap

    Density Profile Asymptotes at the Centre of Dark Matter Halos

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    For the spherical symmetric case, all quantities describing the relaxed dark matter halo can be expressed as functions of the gravitational potential Φ\Phi. Decomposing the radial velocity dispersion σr\sigma_r with respect to Φ\Phi at very large and very small radial distances the possible asymptotic behavior for the density and velocity profiles can be obtained. If reasonable boundary conditions are posed such as a finite halo mass and force-free halo centre the asymptotic density profiles at the centre should be much less steep than the profiles obtained within numerical simulations. In particular cases profiles like Plummer's model are obtained. The reasons of that seeming discrepancy with respect to the results of N-body simulations are discussed.Comment: Accepted for publication in Astronomy & Astrophysics, LaTeX, 7 pages, 2 figure
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