The Holobiont Imperative: perspectives from early emerging animals

This book examines how the growing knowledge of the huge range of animal-bacterial interactions, whether in shared ecosystems or intimate symbioses, is fundamentally altering our understanding of animal biology. Individuals from simple invertebrates to human are not solitary, homogenous entities but consist of complex communities of many species that likely evolved during a billion years of coexistence. Defining the individual microbe-host conversations in these consortia, is a challenging but necessary step on the path to understanding the function of the associations as a whole. The hologenome theory of evolution considers the holobiont with its hologenome as a unit of selection in evolution. This new view may have profound impact on understanding a strictly microbe/symbiont-dependent life style and its evolutionary consequences. It may also affect the way how we approach complex environmental diseases from corals (coral bleaching) to human (inflammatory bowel disease etc). The book is written for scientists as well as medically interested persons in the field of immunobiology, microbiology, evolutionary biology, evolutionary medicine and corals

Non-compact QED(3) coupled to a four-fermi interaction

We present preliminary numerical results for the three dimensional non-compact QED with a weak four-fermion term in the lattice action. Approaches based on Schwinger-Dyson studies, arguments based on thermodynamic inequalities and numerical simulations lead to estimates of the critical number of fermion flavors (below which chiral symmetry is broken) ranging from $N_{fc}=1$ to $N_{fc}=4$. The weak four-fermion coupling provides the framework for an improved algorithm, which allows us to simulate the chiral limit of massless fermions and expose delicate effects.Comment: 3 pages, Contribution to Lattice2004(chiral), Fermilab, June 21-26, 200

Classification of Generalized Symmetries for the Vacuum Einstein Equations

A generalized symmetry of a system of differential equations is an infinitesimal transformation depending locally upon the fields and their derivatives which carries solutions to solutions. We classify all generalized symmetries of the vacuum Einstein equations in four spacetime dimensions. To begin, we analyze symmetries that can be built from the metric, curvature, and covariant derivatives of the curvature to any order; these are called natural symmetries and are globally defined on any spacetime manifold. We next classify first-order generalized symmetries, that is, symmetries that depend on the metric and its first derivatives. Finally, using results from the classification of natural symmetries, we reduce the classification of all higher-order generalized symmetries to the first-order case. In each case we find that the generalized symmetries are infinitesimal generalized diffeomorphisms and constant metric scalings. There are no non-trivial conservation laws associated with these symmetries. A novel feature of our analysis is the use of a fundamental set of spinorial coordinates on the infinite jet space of Ricci-flat metrics, which are derived from Penrose's ``exact set of fields'' for the vacuum equations.Comment: 57 pages, plain Te

Lensing in an interior Kottler solution

We derive the interior Kottler solution of the incompressible fluid and show that the bending of light in this solution does depend on the cosmological constant.Comment: The inner Kottler solution derived and used in this paper is not new. Corresponding references to Stuchlik (2000) and Boehmer (2003) are added. Also added: a numerical example and a figure. This is the version accepted by Gen. Rel. Grav. However it includes a short passage that an anonymous referee had me suppress

Aquifer simulation model for use on disk supported small computer systems

Includes bibliographical references (p. 21).Cover title

D-brane dynamics near compactified NS5-branes

We examine the dynamics of a $Dp$-brane in the background of $k$ coincident, parallel $NS$5-branes which have had one of their common transverse directions compactified. We find that for small energy, bound orbits can exist at sufficiently large distances where there will be no stringy effects. The orbits are dependent upon the energy density, angular momentum and electric field. The analysis breaks down at radial distances comparable with the compactification radius and we must resort to using a modified form of the harmonic function in this region.Comment: Latex, 20 pages, 6 figs, references adde

Discovery and Measurement of Sleptons, Binos, and Winos with a Z'

Extensions of the MSSM could significantly alter its phenomenology at the LHC. We study the case in which the MSSM is extended by an additional U(1) gauge symmetry, which is spontaneously broken at a few TeV. The production cross-section of sleptons is enhanced over that of the MSSM by the process $pp\to Z' \to \tilde{\ell} \tilde{\ell}^*$, so the discovery potential for sleptons is greatly increased. The flavor and charge information in the resulting decay, $\tilde{\ell} \to \ell + {LSP}$, provides a useful handle on the identity of the LSP. With the help of the additional kinematical constraint of an on-shell Z', we implement a novel method to measure all of the superpartner masses involved in this channel. For certain final states with two invisible particles, one can construct kinematic observables bounded above by parent particle masses. We demonstrate how output from one such observable, m_T2, can become input to a second, increasing the number of measurements one can make with a single decay chain. The method presented here represents a new class of observables which could have a much wider range of applicability.Comment: 20 pages, 15 figures; v2 references added and minor change

Exploring the cytotoxicity, uptake, cellular response, and proteomics of mono- and dinuclear DNA light-switch complexes

Drug resistance to platinum chemotherapeutics targeting DNA often involves abrogation of apoptosis, and has emerged as a significant challenge in modern, non-targeted chemotherapy. Consequently, there is great interest in the anti-cancer properties of metal complexes - particularly those that interact with DNA - and mechanisms of consequent cell death. Herein we compare a parent cytotoxic complex [Ru(phen)2(tpphz)]2+ [phen = 1,10-phenanthroline, tpphz = tetrapyridyl [3,2-a:2',3'-c:3'',2''-h:2''',3'''-j] phenazine], with a mononuclear analogue with modified intercalating ligand, [Ru(phen)2(taptp)]2+,[taptp = 4,5,9,18-tetraazaphenanthreno[9,10-b] triphenylene], and two structurally related di-nuclear, tpphz-bridged, heterometallic complexes, RuRe and RuPt. These changes result in a switch from intercalation to groove binding DNA interaction, concomitant reduction in cytotoxic potency, but no significant change in relative cytotoxicity toward platinum-resistant A2780CIS cancer cells, indicating that DNA interaction mode is not critical for the mechanism of platinum resistance. All variants exhibited a light-switch effect, which for the first time, was exploited to investigate timing of cell death by live cell microscopy. Surprisingly, cell death occurred rapidly as a consequence of oncosis, characterized by loss of cytoplasmic volume control, absence of significant mitochondrial membrane potential loss, and lack of activation of apoptotic cell death markers. Importantly, a novel, quantitative proteomic analysis of the A2780 cell genome following exposure to either mononuclear complex reveals changes in protein expression associated with global cell responses to oxidative stress, and DNA replication/repair cellular pathways. This combination of a multiple targeting modality and induction of a non-apoptotic death mechanism makes these complexes highly promising chemotherapeutic cytotoxicity leads

What do young athletes implicitly understand about psychological skills?

One reason sport psychologists teach psychological skills is to enhance performance in sport; but the value of psychological skills for young athletes is questionable because of the qualitative and quantitative differences between children and adults in their understanding of abstract concepts such as mental skills. To teach these skills effectively to young athletes, sport psychologists need to appreciate what young athletes implicitly understand about such skills because maturational (e.g., cognitive, social) and environmental (e.g., coaches) factors can influence the progressive development of children and youth. In the present qualitative study, we explored young athletes’ (aged 10–15 years) understanding of four basic psychological skills: goal setting, mental imagery, self-talk, and relaxation. Young athletes (n = 118: 75 males and 43 females) completed an open-ended questionnaire to report their understanding of these four basic psychological skills. Compared with the older youth athletes, the younger youth athletes were less able to explain the meaning of each psychological skill. Goal setting and mental imagery were better understood than self-talk and relaxation. Based on these findings, sport psychologists should consider adapting interventions and psychoeducational programs to match young athletes’ age and developmental level

D-Brane Dynamics and NS5 Rings

We consider the classical motion of a probe D-brane moving in the background geometry of a ring of NS5 branes, assuming that the latter are non-dynamical. We analyse the solutions to the Dirac-Born-Infield (DBI) action governing the approximate dynamics of the system. In the near horizon (throat) approximation we find several exact solutions for the probe brane motion. These are compared to numerical solutions obtained in more general cases. One solution of particular interest is when the probe undergoes oscillatory motion through the centre of the ring (and perpendicular to it). By taking the ring radius sufficiently large, this solution should remain stable to any stringy corrections coming from open-strings stretching between the probe and the NS5-branes along the ring.Comment: 17 pages, Latex, 8 figures; References adde