Modélisation du mouvement des chevreuils dans un paysage bocager simulé : premiers résultats, projets

Les tiques, dont Ixodes ricinus, espèce la plus répandue en Europe, sont vecteurs de nombreux agents pathogènes, protozoaires, bactéries ou virus, qui peuvent être responsables de maladies touchant l’Homme (Borreliose de Lyme) ou l’animal(babésiose bovine). En vue d’identifier les zones à risque vis-à-vis de ces maladies, il est important de connaître la distribution spatiale des tiques. Cette distribution dépend d’une part des conditions locales de température et d’humidité, d’autre part des mouvements des hôtes des tiques(Estrada-Peña, 2002). Les chevreuils sont notamment reconnus pour influencer fortement la densité de tiques(Ruiz-Fons et Gilbert 2010) et se déplacer sur de longues distances. Dans le cadre de l’estimation spatiale des risques, il est nécessaire de disposer d’un modèle de déplacement des hôtes en fonction des caractéristiques du paysage, dont le développement n’a pas été réalisé à ce jour. Dans un premier temps, une approche théorique a été privilégiée. Un modèle du paysage a été développé via une tesselation de Voronoï et un processus de marquage. Au sein de ce paysage modélisé, le mouvement du chevreuil est modélisé par des équations différentielles stochastiques. Ce mouvement se décompose donc en deux termes : un de dérive, qui dépend d’une fonction de potentiel reliée aux différents habitats qui composent le paysage, et un terme de diffusion. A partir d’une première fonction potentielle, il est donc possible de simuler le déplacement d’un individu dans un paysage modélisé. Les développements actuels visent dans un premier temps à tester différentes fonctions de potentiel en fonction de nos connaissances sur le comportement du chevreuil. L’étape suivante consistera à développer des méthodes d’inférence afin d’estimer les paramètres à partir de données simulées ou observées. Par la suite le prototype obtenu pourra être utilisé pour tester l’influence des caractéristiques du paysage sur le mouvement des chevreuils. Enfin, un couplage avec un modèle de dynamique de population de tiques (Hoch et al, 2010) fournira des aires de répartition simulées des vecteurs

Genetic manipulation of adult-born hippocampal neurons rescues memory in a mouse model of Alzheimer's disease

Richetin et al. demonstrate that retroviral expression of the transcription factor NeuroD1 in neural progenitor cells of the adult mouse hippocampus promotes differentiation, maturation and synaptic integration of newborn granule cells in vivo. When applied to a mouse model of Alzheimer's disease, the gene-targeting strategy abolishes hippocampus-dependent memory deficit

Control of M. tuberculosis ESAT-6 Secretion and Specific T Cell Recognition by PhoP

Analysis of mycobacterial strains that have lost their ability to cause disease is a powerful approach to identify yet unknown virulence determinants and pathways involved in tuberculosis pathogenesis. Two of the most widely used attenuated strains in the history of tuberculosis research are Mycobacterium bovis BCG (BCG) and Mycobacterium tuberculosis H37Ra (H37Ra), which both lost their virulence during in vitro serial passage. Whereas the attenuation of BCG is due mainly to loss of the ESAT-6 secretion system, ESX-1, the reason why H37Ra is attenuated remained unknown. However, here we show that a point mutation (S219L) in the predicted DNA binding region of the regulator PhoP is involved in the attenuation of H37Ra via a mechanism that impacts on the secretion of the major T cell antigen ESAT-6. Only H37Ra “knock-ins” that carried an integrated cosmid with the wild-type phoP gene from M. tuberculosis H37Rv showed changes in colony morphology, increased virulence, ESAT-6 secretion, and induction of specific T cell responses, whereas other H37Ra constructs did not. This finding established a link between the PhoP regulator and ESAT-6 secretion that opens exciting new perspectives for elucidating virulence regulation in M. tuberculosis

Continuous Symmetry Breaking in a Two-dimensional Rydberg Array

Spontaneous symmetry breaking underlies much of our classification of phases of matter and their associated transitions. The nature of the underlying symmetry being broken determines many of the qualitative properties of the phase; this is illustrated by the case of discrete versus continuous symmetry breaking. Indeed, in contrast to the discrete case, the breaking of a continuous symmetry leads to the emergence of gapless Goldstone modes controlling, for instance, the thermodynamic stability of the ordered phase. Here, we realize a two-dimensional dipolar XY model -- which exhibits a continuous spin-rotational symmetry -- utilizing a programmable Rydberg quantum simulator. We demonstrate the adiabatic preparation of correlated low-temperature states of both the XY ferromagnet and the XY antiferromagnet. In the ferromagnetic case, we characterize the presence of long-range XY order, a feature prohibited in the absence of long-range dipolar interaction. Our exploration of the many-body physics of XY interactions complements recent works utilizing the Rydberg-blockade mechanism to realize Ising-type interactions exhibiting discrete spin rotation symmetry.Comment: 18 pages, 3 figures in main text, 9 figures in supplemental method

Institut de recherche interdisciplinaire sur les enjeux sociaux, sciences sociales, politiques, santé – IRIS

Jonathan Friedman, directeur d’étudesNatacha Gagné, professeure adjointe à l’Université d’OttawaPaula Lopez-Caballero, post-doctorante au CERIMarie Salaün, maître de conférences à l’Université Paris-VI/Descartes Questions autochtones contemporaines Cette troisième année du séminaire a vu l’organisation de 12 séances, du 18 février au 27 mai 2010. En moyenne, le séminaire a regroupé une quinzaine de participants. Il a débuté par une présentation, par Marie Salaün et Paula López Caballero, de l..

Institut de recherche interdisciplinaire sur les enjeux sociaux, sciences sociales, politiques, santé – IRIS

Jonathan Friedman, directeur d’étudesNatacha Gagné, professeure adjointe à l’Université d’OttawaPaula Lopez-Caballero, post-doctorante au CERIMarie Salaün, maître de conférences à l’Université Paris-VI/Descartes Questions autochtones contemporaines Cette troisième année du séminaire a vu l’organisation de 12 séances, du 18 février au 27 mai 2010. En moyenne, le séminaire a regroupé une quinzaine de participants. Il a débuté par une présentation, par Marie Salaün et Paula López Caballero, de l..

Estimating the delay between host infection and disease (incubation period) and assessing its significance to the epidemiology of plant diseases.

Knowledge of the incubation period of infectious diseases (time between host infection and expression of disease symptoms) is crucial to our epidemiological understanding and the design of appropriate prevention and control policies. Plant diseases cause substantial damage to agricultural and arboricultural systems, but there is still very little information about how the incubation period varies within host populations. In this paper, we focus on the incubation period of soilborne plant pathogens, which are difficult to detect as they spread and infect the hosts underground and above-ground symptoms occur considerably later. We conducted experiments on Rhizoctonia solani in sugar beet, as an example patho-system, and used modelling approaches to estimate the incubation period distribution and demonstrate the impact of differing estimations on our epidemiological understanding of plant diseases. We present measurements of the incubation period obtained in field conditions, fit alternative probability models to the data, and show that the incubation period distribution changes with host age. By simulating spatially-explicit epidemiological models with different incubation-period distributions, we study the conditions for a significant time lag between epidemics of cryptic infection and the associated epidemics of symptomatic disease. We examine the sensitivity of this lag to differing distributional assumptions about the incubation period (i.e. exponential versus Gamma). We demonstrate that accurate information about the incubation period distribution of a pathosystem can be critical in assessing the true scale of pathogen invasion behind early disease symptoms in the field; likewise, it can be central to model-based prediction of epidemic risk and evaluation of disease management strategies. Our results highlight that reliance on observation of disease symptoms can cause significant delay in detection of soil-borne pathogen epidemics and mislead practitioners and epidemiologists about the timing, extent, and viability of disease control measures for limiting economic loss.ML thanks the Institut Technique français de la Betterave industrielle (ITB) for funding this project. CAG and JANF were funded by the UK’s Biotechnology and Biological Sciences Research Council (BBSRC). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript

Continuous symmetry breaking in a two-dimensional Rydberg array

Spontaneous symmetry breaking underlies much of our classification of phases of matter and their associated transitions. The nature of the underlying symmetry being broken determines many of the qualitative properties of the phase; this is illustrated by the case of discrete versus continuous symmetry breaking. Indeed, in contrast to the discrete case, the breaking of a continuous symmetry leads to the emergence of gapless Goldstone modes controlling, for instance, the thermodynamic stability of the ordered phase. Here, we realize a two-dimensional dipolar XY model that shows a continuous spin-rotational symmetry using a programmable Rydberg quantum simulator. We demonstrate the adiabatic preparation of correlated low-temperature states of both the XY ferromagnet and the XY antiferromagnet. In the ferromagnetic case, we characterize the presence of a long-range XY order, a feature prohibited in the absence of long-range dipolar interaction. Our exploration of the many-body physics of XY interactions complements recent works using the Rydberg-blockade mechanism to realize Ising-type interactions showing discrete spin rotation symmetry.This work is supported by the European Union’s Horizon 2020 research and innovation programme under grant agreement no. 817482 (PASQuanS), the Agence Nationale de la Recherche (ANR, project nos. RYBOTIN and ANR-22-PETQ-0004, project QuBitAF) and the European Research Council (advanced grant no. 101018511-ATARAXIA). J.H. acknowledges support from the NSF OIA Convergence Accelerator programme under award number 2040549, and the Munich Quantum Valley, which is supported by the Bavarian state government with funds from the Hightech Agenda Bayern Plus. M.S. and A.M.L. acknowledge support by the Austrian Science Fund (FWF) through grant no. I 4548. D.B. acknowledges support from grant no. MCIN/AEI/10.13039/501100011033 (grant nos. RYC2018- 025348-I, PID2020-119667GA-I00 and European Union NextGenerationEU PRTR-C17.I1). M.P.Z. acknowledges support from the Department of the Environment (DOE) Early Career programme and the Alfred P. Sloan foundation. N.Y.Y. acknowledges support from the Army Research Office (ARO) (grant no. W911NF-21-1-0262), the AFOSR MURI programme (grant no. W911NF-20-1-0136), the David and Lucile Packard foundation, and the Alfred P. Sloan foundation. M.B. and V.L. acknowledge support from NSF QLCI programme (grant no. OMA-2016245). S.C. acknowledges support from the ARO through the MURI programme (grant no. W911NF-17-1-0323) and from the US DOE, Office of Science, Office of Advanced Scientific Computing Research, under the Accelerated Research in Quantum Computing programme.Peer reviewe

SRH and HrQOL: does social position impact differently on their link with health status?

<p>Abstract</p> <p>Background</p> <p>Self-rated Health (SRH) and health-related quality of life (HRQoL) are used to evaluate health disparities. Like all subjective measures of health, they are dependent on health expectations that are associated with socioeconomic characteristics. It is thus needed to analyse the influence played by socioeconomic position (SEP) on the relationship between these two indicators and health conditions if we aim to use them to study health disparities. Our objective is to assess the influence of SEP on the relationship between physical health status and subjective health status, measured by SRH and HRQoL using the SF-36 scale.</p> <p>Methods</p> <p>We used data from the French National Health Survey. SEP was assessed by years of education and household annual income. Physical health status was measured by functional limitations and chronic low back pain.</p> <p>Results</p> <p>Regardless of their health status, people with lower SEP were more likely than their more socially advantaged counterparts to report poor SRH and poorer HRQoL, using any of the indicators of SEP. The negative impact of chronic low back pain on SRH was relatively greater in people with a high SEP than in those with a low SEP. In contrast, chronic low back pain and functional limitations had less impact on physical and mental component scores of quality of life for socially advantaged men and women.</p> <p>Conclusions</p> <p>Both SRH and HRQoL were lower among those reporting functional limitations or chronic low back pain. However, the change varied according SEP and the measure. In relative term, the negative impact of a given health condition seems to be greater on SRH and lower on HRQoL for people with higher SEP in comparison with people with low SEP. Using SRH could thus decrease socioeconomic differences. In contrast using HRQoL could increase these differences, suggesting being cautious when using these indicators for analyzing health disparities.</p