The Development of Polyamines throughout Brassica rapa over its Lifecycle

Polyamines are naturally produced chemicals in plants involved in growth, development and stress response. The primary objective of my study is to create a profile of changes in the entire life of the plant, in every organ at all stages of development from seed germination to seed formation. We have analyzed polyamines putrescine, spermidine and spermine in all parts of Brassica rapa, a small, rapid growing plant. Parallel to the polyamines, we will also study changes in the activities of the polyamine biosynthetic enzymes and the expression of their genes in different organs at different times. In the next stage of the study, the expression of selected genes will be inhibited by RNAi constructs, allowing further analysis of their role in growth and stress response. Because polyamines play are important in development and lifecycle of plants, altering their presence may be useful in altering plant growth patterns, such as in seasonal crops

Developing and Diagnosing Climate Change Indicators of Regional Aerosol Optical Properties

Given the importance of aerosol particles to radiative transfer via aerosol-radiation interactions, a methodology for tracking and diagnosing causes of temporal changes in regional-scale aerosol populations is illustrated. The aerosol optical properties tracked include estimates of total columnar burden (aerosol optical depth, AOD), dominant size mode (ngstrm exponent, AE), and relative magnitude of radiation scattering versus absorption (single scattering albedo, SSA), along with metrics of the structure of the spatial field of these properties. Over well-defined regions of North America, there are generally negative temporal trends in mean and extreme AOD, and SSA. These are consistent with lower aerosol burdens and transition towards a relatively absorbing aerosol, driven primarily by declining sulfur dioxide emissions. Conversely, more remote regions are characterized by increasing mean and extreme AOD that is attributed to increased local wildfire emissions and long-range (transcontinental) transport. Regional and national reductions in anthropogenic emissions of aerosol precursors are leading to declining spatial autocorrelation in the aerosol fields and increased importance of local anthropogenic emissions in dictating aerosol burdens. However, synoptic types associated with high aerosol burdens are intensifying (becoming more warm and humid), and thus changes in synoptic meteorology may be offsetting aerosol burden reductions associated with emissions legislation

Heterogeneous ice nucleation properties of natural desert dust particles coated with a surrogate of secondary organic aerosol

Ice nucleation abilities of surface collected mineral dust particles from the Sahara (SD) and Asia (AD) are investigated for the temperature (T) range 253–233 K and for supersaturated relative humidity (RH) conditions in the immersion freezing regime. The dust particles were also coated with a proxy of secondary organic aerosol (SOA) from the dark ozonolysis of α-pinene to better understand the influence of atmospheric coatings on the immersion freezing ability of mineral dust particles. The measurements are conducted on polydisperse particles in the size range 0.01–3 µm with three different ice nucleation chambers. Two of the chambers follow the continuous flow diffusion chamber (CFDC) principle (Portable Ice Nucleation Chamber, PINC) and the Colorado State University CFDC (CSU-CFDC), whereas the third was the Aerosol Interactions and Dynamics in the Atmosphere (AIDA) cloud expansion chamber. From observed activated fractions (AFs) and ice nucleation active site (INAS) densities, it is concluded within experimental uncertainties that there is no significant difference between the ice nucleation ability of the particular SD and AD samples examined. A small bias towards higher INAS densities for uncoated versus SOA-coated dusts is found but this is well within the 1σ (66 % prediction bands) region of the average fit to the data, which captures 75 % of the INAS densities observed in this study. Furthermore, no systematic differences are observed between SOA-coated and uncoated dusts in both SD and AD cases, regardless of coating thickness (3–60 nm). The results suggest that any differences observed are within the uncertainty of the measurements or differences in cloud chamber parameters such as size fraction of particles sampled, and residence time, as well as assumptions in using INAS densities to compare polydisperse aerosol measurements which may show variable composition with particle size. Coatings with similar properties to that of the SOA in this work and with coating thickness up to 60 nm are not expected to impede or enhance the immersion mode ice nucleation ability of mineral dust particles.ISSN:1680-7375ISSN:1680-736

Experimental study of the role of physicochemical surface processing on the IN ability of mineral dust particles

During the measurement campaign FROST 2 (FReezing Of duST 2), the Leipzig Aerosol Cloud Interaction Simulator (LACIS) was used to investigate the influence of various surface modifications on the ice nucleating ability of Arizona Test Dust (ATD) particles in the immersion freezing mode. The dust particles were exposed to sulfuric acid vapor, to water vapor with and without the addition of ammonia gas, and heat using a thermodenuder operating at 250 °C. Size selected, quasi monodisperse particles with a mobility diameter of 300 nm were fed into LACIS and droplets grew on these particles such that each droplet contained a single particle. Temperature dependent frozen fractions of these droplets were determined in a temperature range between −40 °C ≤T≤−28 °C. The pure ATD particles nucleated ice over a broad temperature range with their freezing behavior being separated into two freezing branches characterized through different slopes in the frozen fraction vs. temperature curves. Coating the ATD particles with sulfuric acid resulted in the particles' IN potential significantly decreasing in the first freezing branch (T>−35 °C) and a slight increase in the second branch (T≤−35 °C). The addition of water vapor after the sulfuric acid coating caused the disappearance of the first freezing branch and a strong reduction of the IN ability in the second freezing branch. The presence of ammonia gas during water vapor exposure had a negligible effect on the particles' IN ability compared to the effect of water vapor. Heating in the thermodenuder led to a decreased IN ability of the sulfuric acid coated particles for both branches but the additional heat did not or only slightly change the IN ability of the pure ATD and the water vapor exposed sulfuric acid coated particles. In other words, the combination of both sulfuric acid and water vapor being present is a main cause for the ice active surface features of the ATD particles being destroyed. A possible explanation could be the chemical transformation of ice active metal silicates to metal sulfates. The strongly enhanced reaction between sulfuric acid and dust in the presence of water vapor and the resulting significant reductions in IN potential are of importance for atmospheric ice cloud formation. Our findings suggest that the IN concentration can decrease by up to one order of magnitude for the conditions investigated

Trace gas emissions from combustion of peat, crop residue, domestic biofuels, grasses, and other fuels: Configuration and Fourier transform infrared (FTIR) component of the fourth Fire Lab at Missoula Experiment (FLAME-4)

During the fourth Fire Lab at Missoula Experiment (FLAME-4, October-November 2012) a large variety of regionally and globally significant biomass fuels was burned at the US Forest Service Fire Sciences Laboratory in Missoula, Montana. The particle emissions were characterized by an extensive suite of instrumentation that measured aerosol chemistry, size distribution, optical properties, and cloud-nucleating properties. The trace gas measurements included high-resolution mass spectrometry, one-and two-dimensional gas chromatography, and open-path Fourier transform infrared (OP-FTIR) spectroscopy. This paper summarizes the overall experimental design for FLAME-4-including the fuel properties, the nature of the burn simulations, and the instrumentation employed-and then focuses on the OP-FTIR results. The OP-FTIR was used to measure the initial emissions of 20 trace gases: CO2, CO, CH4, C2H2, C2H4, C3H6, HCHO, HCOOH, CH3OH, CH3COOH, glycolaldehyde, furan, H2O, NO, NO2, HONO, NH3, HCN, HCl, and SO2. These species include most of the major trace gases emitted by biomass burning, and for several of these compounds, this is the first time their emissions are reported for important fuel types. The main fire types included African grasses, Asian rice straw, cooking fires (open (three-stone), rocket, and gasifier stoves), Indonesian and extratropical peat, temperate and boreal coniferous canopy fuels, US crop residue, shredded tires, and trash. Comparisons of the OP-FTIR emission factors (EFs) and emission ratios (ERs) to field measurements of biomass burning verify that the large body of FLAME-4 results can be used to enhance the understanding of global biomass burning and its representation in atmospheric chemistry models. Crop residue fires are widespread globally and account for the most burned area in the US, but their emissions were previously poorly characterized. Extensive results are presented for burning rice and wheat straw: two major global crop residues. Burning alfalfa produced the highest average NH3EF observed in the study (6.63 ± 2.47 g kg-1), while sugar cane fires produced the highest EF for glycolaldehyde (6.92 g kg-1) and other reactive oxygenated organic gases such as HCHO, HCOOH, and CH3COOH. Due to the high sulfur and nitrogen content of tires, they produced the highest average SO2emissions (26.2 ± 2.2 g kgg-1) and high NOx and HONO emissions. High variability was observed for peat fire emissions, but they were consistently characterized by large EFs for NH3(1.82 ± 0.60 g kg-1) and CH4(10.8 ± 5.6 g kg-1). The variability observed in peat fire emissions, the fact that only one peat fire had previously been subject to detailed emissions characterization, and the abundant emissions from tropical peatlands all impart high value to our detailed measurements of the emissions from burning three Indonesian peat samples. This study also provides the first EFs for HONO and NO2for Indonesian peat fires. Open cooking fire emissions of HONO and HCN are reported for the first time, and the first emissions data for HCN, NO, NO2, HONO, glycolaldehyde, furan, and SO2are reported for rocket stoves: a common type of improved cookstove. The HCN/CO emission ratios for cooking fires (1.72 × 10-3± 4.08 × 10-4) and peat fires (1.45 × 10-2± 5.47 × 10-3) are well below and above the typical values for other types of biomass burning, respectively. This would affect the use of HCN/CO observations for source apportionment in some regions. Biomass burning EFs for HCl are rare and are reported for the first time for burning African savanna grasses. High emissions of HCl were also produced by burning many crop residues and two grasses from coastal ecosystems. HCl could be the main chlorine-containing gas in very fresh smoke, but rapid partitioning to aerosol followed by slower outgassing probably occurs

Providing the Context for Intentional Learning

This article is written in response to Sharon Derry's article “Remediating Academic Difficulties Through Strategy Training: The Acquisition of Useful Knowledge.” The features of effective strategy instruction, to which Derry refers, are illustrated by examining the nature of the decisions the teacher confronts; specifically, determining the purposes of instruction, the context in which instruction occurs, and the roles of the teacher and students in instruction.Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/69150/2/10.1177_074193259001100608.pd

Cyclic DI-GMP Phosphodiesterases RmdA and RmdB are involved in regulating colony morphology and development in Streptomyces coelicolor. Journal of Bacteriology

Cyclic dimeric GMP (c-di-GMP) regulates numerous processes in Gram-negative bacteria, yet little is known about its role in Gram-positive bacteria. Here we characterize two c-di-GMP phosphodiesterases from the filamentous high-GC Gram-positive actinobacterium Streptomyces coelicolor, involved in controlling colony morphology and development. A transposon mutation in one of the two phosphodiesterase genes, SCO0928, hereby designated rmdA (regulator ofmorphology and development A), resulted in decreased levels of spore-specific gray pigment and a delay in spore formation. The RmdA protein contains GGDEF-EAL domains arranged in tandem and possesses c-di-GMP phosphodiesterase activity, as is evident from in vitro enzymatic assays using the purified protein. RmdA contains a PAS9 domain and is a hemoprotein. Inactivation of another GGDEF-EAL-encoding gene, SCO5495, designated rmdB, resulted in a phenotype identical to that of the rmdA mutant. Purified soluble fragment of RmdB devoid of transmembrane domains also possesses c-di-GMP phosphodiesterase activity. ThermdA rmdB double mutant has a bald phenotype and is impaired in aerial mycelium formation. This suggests that RmdA and RmdB functions are additive and at least partially overlapping. The rmdA and rmdB mutations likely result in increased local pools of intracellular c-di-GMP, because intracellular c-di-GMP levels in the single mutants did not differ significantly from those of the wild type, whereas in the double rmdA rmdB mutant, c-di-GMP levels were 3-fold higher than those in the wild type. This study highlights the importance of c-di-GMP-dependent signaling in actinomycete colony morphology and development and identifies two c-di-GMP phosphodiesterases controlling these processes

Pair-instability and super-luminous supernova discoveries at z = 2.05, z = 2.50, and z = 3.90

We present the discovery of three super-luminous supernovae (SLSNe) at z = 2 - 4 as part of our survey to detect ultraviolet-luminous supernova at z > 2. SLSNe are ≥10 times more luminous than normal supernova types, reaching peak luminosities of ≳10^(44) erg s^(−1). A small subset of SLSNe (type SLSN-R) exhibit a slow evolution, and thus enormous integrated energies (≳10^(51) erg), consistent with the radiative decay of several solar masses of 56 Ni. SLSN-R are believed to be the deaths of very massive stars, ∼140 - 260 M_⊙, that are theorized to result in pair-instability supernovae. Two of the high redshift SLSNe presented here are consistent with the behavior of SLSN-R out to the extent in which their light curves are sampled, with the third event being consistent with the more rapid fade of the type II-L SLSN SN 2008es at z = 0.205. SLSNe are extremely rare locally but are expected to have been more common in the early Universe and as members of the first generation of stars to form after the Big Bang, the Population III stars. The high intrinsic luminosity of SLSNe and their detectability using our image-stacking technique out to z ∼ 6 provide the first viable route to detect and study the deaths of massive Population III stars which are expected to form in pristine gas at redshifts as low as z ∼ 2