91 research outputs found
A Fast Testing Method to Objectively Quantify the Stiffness of Stability Boots
Stability boots can protect the ankle ligaments from overloading after serious injury and facilitate protected movement in order to aid healing of the surrounding soft tissue structures. For comparing different stability shoe designs and prototypes, a reliable and fast testing method (FTM) is required. The aim of this study was to assess the reliability of a novel custom-built device. Six different stability boots were tested in a novel device that allowed body weight to be taken into account using a pneumatic actuator. The fixation of the boots was controlled using two air pad pressure sensors. The range of motion (RoM) was then assessed during 5 trials at physiological ankle joint torques during flexion/extension and inversion/eversion. Furthermore the intraclass correlation coefficient ICC was determined to assess the repetitive reliability of the testing approach. The measured ankle angles ranged from 3.4° to 25° and proved to be highly reliable (ICC=0.99), with standard deviations <9.8%. Comparing single trials to one another resulted in a change of 0.01° joint angle, with a mean error of 0.02°. The FTM demonstrates that it is possible to reliably measure the ankle joint RoM in both the sagittal and frontal planes at controlled torque levels, together with the application of body weight force
FoldAffinity: Binding affinities from nDSF experiments
Differential scanning fluorimetry (DSF) using the inherent fluorescence of proteins (nDSF) is a popular technique to evaluate thermal protein stability in different conditions (e.g. buffer, pH). In many cases, ligand binding increases thermal stability of a protein and often this can be detected as a clear shift in nDSF experiments. Here, we evaluate binding affinity quantification based on thermal shifts. We present four protein systems with different binding affinity ligands, ranging from nM to high ÎŒM. Our study suggests that binding affinities determined by isothermal analysis are in better agreement with those from established biophysical techniques (ITC and MST) compared to apparent Kds obtained from melting temperatures. In addition, we describe a method to optionally fit the heat capacity change upon unfolding (Î Cp) during the isothermal analysis. This publication includes the release of a web server for easy and accessible application of isothermal analysis to nDSF data.Fil: Niebling, Stephan. Centre for Structural Systems Biology; Alemania. European Molecular Biology Laboratory; AlemaniaFil: Burastero, Osvaldo. Consejo Nacional de Investigaciones CientĂficas y TĂ©cnicas. Oficina de CoordinaciĂłn Administrativa Ciudad Universitaria. Instituto de QuĂmica BiolĂłgica de la Facultad de Ciencias Exactas y Naturales. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Instituto de QuĂmica BiolĂłgica de la Facultad de Ciencias Exactas y Naturales; Argentina. Universidad de Buenos Aires. Facultad de Ciencias Exactas y Naturales. Departamento de QuĂmica BiolĂłgica; Argentina. European Molecular Biology Laboratory; AlemaniaFil: BĂŒrgi, JĂ©rĂŽme. European Molecular Biology Laboratory; AlemaniaFil: GĂŒnther, Christian. European Molecular Biology Laboratory; AlemaniaFil: Defelipe, Lucas Alfredo. Consejo Nacional de Investigaciones CientĂficas y TĂ©cnicas; Argentina. European Molecular Biology Laboratory; AlemaniaFil: Sander, Simon. Universitat Hamburg; AlemaniaFil: Gattkowski, Ellen. Universitat Hamburg; AlemaniaFil: Anjanappa, Raghavendra. Universitat Bremen. School of Engineering and Science Jacobs; AlemaniaFil: Wilmanns, Matthias. European Molecular Biology Laboratory; Alemania. Universitat Hamburg; AlemaniaFil: Springer, Sebastian. Universitat Bremen. School of Engineering and Science Jacobs; AlemaniaFil: Tidow, Henning. Universitat Hamburg; AlemaniaFil: GarcĂa Alai, MarĂa. European Molecular Biology Laboratory; Alemania. Centre for Structural Systems Biology; Alemani
Acceleration of the Solar Wind as a Result of the Reconnection of Open Magnetic Flux with Coronal Loops
There are compelling observations of a clear antiâcorrelation between solar wind flow speed and coronal electron temperature, as determined from solar wind ionic charge states. A simple theory is presented which can account for these observations, including the functional form of the correlation: Solar wind flow speed squared varies essentially linearly as the inverse of the coronal electron temperature. In this theory, magnetic field lines in the corona that open into the heliosphere reconnect with coronal loops near their base. This process displaces the open field line, and disturbs and imparts energy into the overlying corona, thereby determining the Poynting vector into the corona. This process releases mass from the loop into the corona, and determines the mass flux of the solar wind. The Poynting and mass flux into the corona determine the final speed of the solar wind, and yield a relationship that provides an excellent fit to observations. © 2003 American Institute of PhysicsPeer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/87652/2/287_1.pd
A Holistic Landscape Description Reveals That Landscape Configuration Changes More over Time than Composition: Implications for Landscape Ecology Studies
International audienceBackground: Space-for-time substitutionâthat is, the assumption that spatial variations of a system can explain and predict the effect of temporal variationsâis widely used in ecology. However, it is questionable whether it can validly be used to explain changes in biodiversity over time in response to land-cover changes.Hypothesis: ere, we hypothesize that different temporal vs spatial trajectories of landscape composition and configuration may limit space-for-time substitution in landscape ecology. Land-cover conversion changes not just the surface areas given over to particular types of land cover, but also affects isolation, patch size and heterogeneity. This means that a small change in land cover over time may have only minor repercussions on landscape composition but potentially major consequences for landscape configuration.Methods: sing land-cover maps of the Paris region for 1982 and 2003, we made a holistic description of the landscape disentangling landscape composition from configuration. After controlling for spatial variations, we analyzed and compared the amplitudes of changes in landscape composition and configuration over time.Results: For comparable spatial variations, landscape configuration varied more than twice as much as composition over time. Temporal changes in composition and configuration were not always spatially matched.Significance: The fact that landscape composition and configuration do not vary equally in space and time calls into question the use of space-for-time substitution in landscape ecology studies. The instability of landscapes over time appears to be attributable to configurational changes in the main. This may go some way to explaining why the landscape variables that account for changes over time in biodiversity are not the same ones that account for the spatial distribution of biodiversity
Conduct of a personal radiofrequency electromagnetic field measurement study: proposed study protocol
Background: The development of new wireless communication technologies that emit radio frequency electromagnetic fields (RF-EMF) is ongoing, but little is known about the RF-EMF exposure distribution in the general population. Previous attempts to measure personal exposure to RF-EMF have used different measurement protocols and analysis methods making comparisons between exposure situations across different study populations very difficult. As a result, observed differences in exposure levels between study populations may not reflect real exposure differences but may be in part, or wholly due to methodological differences.
Methods: The aim of this paper is to develop a study protocol for future personal RF-EMF exposure studies based on experience drawn from previous research. Using the current knowledge base, we propose procedures for the measurement of personal exposure to RF-EMF, data collection, data management and analysis, and methods for the selection and instruction of study participants.
Results: We have identified two basic types of personal RF-EMF measurement studies: population surveys and microenvironmental measurements. In the case of a population survey, the unit of observation is the individual and a randomly selected representative sample of the population is needed to obtain reliable results. For microenvironmental measurements, study participants are selected in order to represent typical behaviours in different microenvironments. These two study types require different methods and procedures.
Conclusion: Applying our proposed common core procedures in future personal measurement studies will allow direct comparisons of personal RF-EMF exposures in different populations and study areas
Quantum crystallography
Approximate wavefunctions can be improved by constraining them to reproduce observations derived from diffraction and scattering experiments. Conversely, charge density models, incorporating electron-density distributions, atomic positions and atomic motion, can be improved by supplementing diffraction experiments with quantum chemically calculated, tailor-made electron densities (form factors). In both cases quantum chemistry and diffraction/scattering experiments are combined into a single, integrated tool. The development of quantum crystallographic research is reviewed. Some results obtained by quantum crystallography illustrate the potential and limitations of this field
Gastbaumarten: Schlussbericht im Forschungsprogramm "Wald und Klimawandel" des Bundesamtes fĂŒr Umwelt BAFU, Bern und der Eidg. Forschungsanstalt WSL, Birmensdorf
Hirshfeld atom refinement
Hirshfeld atom refinement (HAR) is a method which determines structural parameters from single-crystal X-ray diffraction data by using an aspherical atom partitioning of tailor-made ab initio quantum mechanical molecular electron densities without any further approximation. Here the original HAR method is extended by implementing an iterative procedure of successive cycles of electron density calculations, Hirshfeld atom scattering factor calculations and structural least-squares refinements, repeated until convergence. The importance of this iterative procedure is illustrated via the example of crystalline ammonia. The new HAR method is then applied to X-ray diffraction data of the dipeptide Glyâl-Ala measured at 12, 50, 100, 150, 220 and 295â
K, using HartreeâFock and BLYP density functional theory electron densities and three different basis sets. All positions and anisotropic displacement parameters (ADPs) are freely refined without constraints or restraints â even those for hydrogen atoms. The results are systematically compared with those from neutron diffraction experiments at the temperatures 12, 50, 150 and 295â
K. Although non-hydrogen-atom ADPs differ by up to three combined standard uncertainties (csu's), all other structural parameters agree within less than 2â
csu's. Using our best calculations (BLYP/cc-pVTZ, recommended for organic molecules), the accuracy of determining bond lengths involving hydrogen atoms from HAR is better than 0.009â
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 for temperatures of 150â
K or below; for hydrogen-atom ADPs it is better than 0.006â
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2 as judged from the mean absolute X-ray minus neutron differences. These results are among the best ever obtained. Remarkably, the precision of determining bond lengths and ADPs for the hydrogen atoms from the HAR procedure is comparable with that from the neutron measurements â an outcome which is obtained with a routinely achievable resolution of the X-ray data of 0.65â
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