7 research outputs found

    The Helicobacter pylori Genome Project : insights into H. pylori population structure from analysis of a worldwide collection of complete genomes

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    Helicobacter pylori, a dominant member of the gastric microbiota, shares co-evolutionary history with humans. This has led to the development of genetically distinct H. pylori subpopulations associated with the geographic origin of the host and with differential gastric disease risk. Here, we provide insights into H. pylori population structure as a part of the Helicobacter pylori Genome Project (HpGP), a multi-disciplinary initiative aimed at elucidating H. pylori pathogenesis and identifying new therapeutic targets. We collected 1011 well-characterized clinical strains from 50 countries and generated high-quality genome sequences. We analysed core genome diversity and population structure of the HpGP dataset and 255 worldwide reference genomes to outline the ancestral contribution to Eurasian, African, and American populations. We found evidence of substantial contribution of population hpNorthAsia and subpopulation hspUral in Northern European H. pylori. The genomes of H. pylori isolated from northern and southern Indigenous Americans differed in that bacteria isolated in northern Indigenous communities were more similar to North Asian H. pylori while the southern had higher relatedness to hpEastAsia. Notably, we also found a highly clonal yet geographically dispersed North American subpopulation, which is negative for the cag pathogenicity island, and present in 7% of sequenced US genomes. We expect the HpGP dataset and the corresponding strains to become a major asset for H. pylori genomics

    Liparis volcanica (Orchidaceae), una especie nueva del occidente de México

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    Liparis volcanica from Nayarit, Jalisco and Michoacan states, is proposed as a new species. It is compared with Liparis greenwoodiana Espejo, its most close ally. The most important differences between these taxa are found in the form of the lip.Se propone como especie nueva Liparis volcanica, conocida de los estados de Nayarit, Jalisco y Michoacán y se le compara con Liparis greenwoodiana Espejo, su congénere más cercano. Las principales diferencias entre las dos especies se encuentran en la forma del labelo

    Upregulation of S100A8 in peripheral blood mononuclear cells from patients with depression treated with SSRIs: a pilot study

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    Abstract Background Major depressive disorder (MDD) affects more than 350 million people worldwide, and there is currently no laboratory test to diagnose it. This pilot study aimed to identify potential biomarkers in peripheral blood mononuclear cells (PBMCs) from MDD patients. Methods We used tandem mass tagging coupled to synchronous precursor selection (mass spectrometry) to obtain the differential proteomic profile from a pool of PBMCs from MDD patients and healthy subjects, and quantitative PCR to assess gene expression of differentially expressed proteins (DEPs) of our interest. Results We identified 247 proteins, of which 133 had a fold change ≥ 2.0 compared to healthy volunteers. Using pathway enrichment analysis, we found that some processes, such as platelet degranulation, coagulation, and the inflammatory response, are perturbed in MDD patients. The gene-disease association analysis showed that molecular alterations in PBMCs from MDD patients are associated with cerebral ischemia, vascular disease, thrombosis, acute coronary syndrome, and myocardial ischemia, in addition to other conditions such as inflammation and diabetic retinopathy. Conclusions We confirmed by qRT-PCR that S100A8 is upregulated in PBMCs from MDD patients and thus could be an emerging biomarker of this disorder. This report lays the groundwork for future studies in a broader and more diverse population and contributes to a deeper characterization of MDD

    Memoria del tercer encuentro internacional sobre el poder en el pasado y el presente de América Latina

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    Este volumen está compuesto por diecisiete trabajos que abordan temas relativos a las manifestaciones, tanto democráticas como autoritarias, de un aspecto de la realidad que está presente en la vida de toas las personas: el poder. En ocasiones, constituyen reflexiones teóricas, pero en su mayoría enfrentan problemas sobre el pasado y presente de México, sin omitir el proceso electoral que culminará en las elecciones que ya están inmersas la clase política y la opinión pública del país

    Characteristics and predictors of death among 4035 consecutively hospitalized patients with COVID-19 in Spain

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