Evaluating Multi-Sensor Agreement of Satellite Particulate Backscatter Retrievals by Validatin Against In-Water Measurement

Biogeochemical-Argo profiling floats have increased in situ data density across multiple water types, creating new opportunities to evaluate satellite instrument-to-instrument differences in particulate back scattering coefficient(bbp). Retrievals of bbp from identical GIOP algorithm configurations differ between satellite instruments due to1)algorithm input differences and 2) radiometric differences. 3.Instrument-to-instrument differences must be considered before creating a merged timeseries of satellite ocean color products,in order to distinguish real, environmental contributions from spurious algorithmic or radiometricone

Host–Parasite Interactions and the Evolution of Gene Expression

Interactions between hosts and parasites provide an ongoing source of selection that promotes the evolution of a variety of features in the interacting species. Here, we use a genetically explicit mathematical model to explore how patterns of gene expression evolve at genetic loci responsible for host resistance and parasite infection. Our results reveal the striking yet intuitive conclusion that gene expression should evolve along very different trajectories in the two interacting species. Specifically, host resistance loci should frequently evolve to co-express alleles, whereas parasite infection loci should evolve to express only a single allele. This result arises because hosts that co-express resistance alleles are able to recognize and clear a greater diversity of parasite genotypes. By the same token, parasites that co-express antigen or elicitor alleles are more likely to be recognized and cleared by the host, and this favours the expression of only a single allele. Our model provides testable predictions that can help interpret accumulating data on expression levels for genes relevant to host−parasite interactions

Roles of Candida albicans Mig1 and Mig2 in glucose repression, pathogenicity traits, and SNF1 essentiality.

Metabolic adaptation is linked to the ability of the opportunistic pathogen Candida albicans to colonize and cause infection in diverse host tissues. One way that C. albicans controls its metabolism is through the glucose repression pathway, where expression of alternative carbon source utilization genes is repressed in the presence of its preferred carbon source, glucose. Here we carry out genetic and gene expression studies that identify transcription factors Mig1 and Mig2 as mediators of glucose repression in C. albicans. The well-studied Mig1/2 orthologs ScMig1/2 mediate glucose repression in the yeast Saccharomyces cerevisiae; our data argue that C. albicans Mig1/2 function similarly as repressors of alternative carbon source utilization genes. However, Mig1/2 functions have several distinctive features in C. albicans. First, Mig1 and Mig2 have more co-equal roles in gene regulation than their S. cerevisiae orthologs. Second, Mig1 is regulated at the level of protein accumulation, more akin to ScMig2 than ScMig1. Third, Mig1 and Mig2 are together required for a unique aspect of C. albicans biology, the expression of several pathogenicity traits. Such Mig1/2-dependent traits include the abilities to form hyphae and biofilm, tolerance of cell wall inhibitors, and ability to damage macrophage-like cells and human endothelial cells. Finally, Mig1 is required for a puzzling feature of C. albicans biology that is not shared with S. cerevisiae: the essentiality of the Snf1 protein kinase, a central eukaryotic carbon metabolism regulator. Our results integrate Mig1 and Mig2 into the C. albicans glucose repression pathway and illuminate connections among carbon control, pathogenicity, and Snf1 essentiality

The Sedimentary Cycle on Early Mars

Two decades of intensive research have demonstrated that early Mars (2 Gyr) had an active sedimentary cycle, including well-preserved stratigraphic records, understandable within a source-to-sink framework with remarkable fidelity. This early cycle exhibits first-order similarities to (e.g., facies relationships, groundwater diagenesis, recycling) and first-order differences from (e.g., greater aeolian versus subaqueous processes, basaltic versus granitic provenance, absence of plate tectonics) Earth's record. Mars’ sedimentary record preserves evidence for progressive desiccation and oxidation of the surface over time, but simple models for the nature and evolution of paleoenvironments (e.g., acid Mars, early warm and wet versus late cold and dry) have given way to the view that, similar to Earth, different climate regimes on Mars coexisted on regional scales and evolved on variable timescales, and redox chemistry played a pivotal role. A major accomplishment of Mars exploration has been to demonstrate that surface and subsurface sedimentary environments were both habitable and capable of preserving any biological record

Photon-number-resolution with sub-30-ps timing using multi-element superconducting nanowire single photon detectors

A photon-number-resolving detector based on a four-element superconducting nanowire single photon detector is demonstrated to have sub-30-ps resolution in measuring the arrival time of individual photons. This detector can be used to characterize the photon statistics of non-pulsed light sources and to mitigate dead-time effects in high-speed photon counting applications. Furthermore, a 25% system detection efficiency at 1550 nm was demonstrated, making the detector useful for both low-flux source characterization and high-speed photon-counting and quantum communication applications. The design, fabrication and testing of this detector are described, and a comparison between the measured and theoretical performance is presented.Comment: 13 pages, 5 figure

Gravitational radiation reaction and inspiral waveforms in the adiabatic limit

We describe progress evolving an important limit of binary orbits in general relativity, that of a stellar mass compact object gradually spiraling into a much larger, massive black hole. These systems are of great interest for gravitational wave observations. We have developed tools to compute for the first time the radiated fluxes of energy and angular momentum, as well as instantaneous snapshot waveforms, for generic geodesic orbits. For special classes of orbits, we compute the orbital evolution and waveforms for the complete inspiral by imposing global conservation of energy and angular momentum. For fully generic orbits, inspirals and waveforms can be obtained by augmenting our approach with a prescription for the self force in the adiabatic limit derived by Mino. The resulting waveforms should be sufficiently accurate to be used in future gravitational-wave searches.Comment: Accepted for publication in Phys. Rev. Let

Saildrone: Adaptively Sampling the Marine Environment

From 11 April to 11 June 2018 a new type of ocean observing platform, the Saildrone surface vehicle, collected data on a round-trip, 60-day cruise from San Francisco Bay, down the U.S. and Mexican coast to Guadalupe Island. The cruise track was selected to optimize the science team’s validation and science objectives. The validation objectives include establishing the accuracy of these new measurements. The scientific objectives include validation of satellite-derived fluxes, sea surface temperatures, and wind vectors and studies of upwelling dynamics, river plumes, air–sea interactions including frontal regions, and diurnal warming regions. On this deployment, the Saildrone carried 16 atmospheric and oceanographic sensors. Future planned cruises (with open data policies) are focused on improving our understanding of air–sea fluxes in the Arctic Ocean and around North Brazil Current rings

Anthropometric and physiological predictors of flat-water 1000 m kayak performance in young adolescents and the effectiveness of a high volume training camp.

Our purpose was to determine the relationship of anthropometric and physiological variables with 1000m flat-water kayak (K1000) performance. A secondary purpose was to determine the effectiveness of a high volume training camp. High performance young adolescent kayakers (n=13, 8 males, 5 females, 15±1 yrs) participated in this study. Testing before and after the 3-4 week training camp included anthropometric measurements (height, sitting height, arm span, and body mass), strength (1-RM: bench press and bench pull), flexibility (sit and reach), and an incremental kayak ergometer test to determine peak oxygen uptake (VO2peak) and anaerobic threshold, and an open water K1000 time trial. K1000 time was significantly correlated with height (r=-0.81; p\u3c0.01), sitting height (r=-0.85; p\u3c0.01), arm span (r=-0.87; p\u3c0.01), bench press (r=-0.92; p\u3c0.01), bench pull (r=-0.85; p\u3c0.01), VO2peak (r=-0.87; p\u3c0.01) and anaerobic threshold (r=-0.83; p\u3c0.05). Following the training camp there were no significant differences in body mass, strength, and VO2 peak, however, anaerobic threshold (33.6±6.2 to 42.3±8.8 ml•kg-1•min-1, p=0.001) and K1000 (302±44 to 289±31 sec, p=0.007) significantly improved. The results of this study suggest that K1000 performance in young adolescent kayakers appears to require a high aerobic and strength contribution and that a high volume training camp is effective for improving anaerobic threshold and performance

Parallel Evolution of Tetrodotoxin Resistance in Three Voltage-Gated Sodium Channel Genes in the Garter Snake Thamnophis sirtalis

Members of a gene family expressed in a single species often experience common selection pressures. Consequently, the molecular basis of complex adaptations may be expected to involve parallel evolutionary changes in multiple paralogs. Here, we use bacterial artificial chromosome library scans to investigate the evolution of the voltage-gated sodium channel (Nav) family in the garter snake Thamnophis sirtalis, a predator of highly toxic Taricha newts. Newts possess tetrodotoxin (TTX), which blocks Nav’s, arresting action potentials in nerves and muscle. Some Thamnophis populations have evolved resistance to extremely high levels of TTX. Previous work has identified amino acid sites in the skeletal muscle sodium channel Nav1.4 that confer resistance to TTX and vary across populations. We identify parallel evolution of TTX resistance in two additional Nav paralogs, Nav1.6 and 1.7, which are known to be expressed in the peripheral nervous system and should thus be exposed to ingested TTX. Each paralog contains at least one TTX-resistant substitution identical to a substitution previously identified in Nav1.4. These sites are fixed across populations, suggesting that the resistant peripheral nerves antedate resistant muscle. In contrast, three sodium channels expressed solely in the central nervous system (Nav1.1–1.3) showed no evidence of TTX resistance, consistent with protection from toxins by the blood–brain barrier. We also report the exon–intron structure of six Nav paralogs, the first such analysis for snake genes. Our results demonstrate that the molecular basis of adaptation may be both repeatable across members of a gene family and predictable based on functional considerations

General Report - Session 6

This general report provides a summary of 40 accepted papers submitted to sessions 6a on ground improvement methods and session 6b on geoenvironmental engineering. The papers are contributed by the researchers and professionals from the United States and 15 other countries and they cover a wide range of topics based on laboratory experiments, field design, construction and monitoring, and mathematical modeling. A brief summary of each paper is provided under organized sections and the reader is referred to consult the full paper for details. Finally, the topics for discussion are listed