Spatio-temporal variability of micro-, nano- and pico-phytoplankton in the Mediterranean Sea from satellite ocean colour data of SeaWiFS

Abstract. The seasonal and year-to-year variability of the phytoplankton size class (PSC) spatial distribution has been examined in the Mediterranean Sea by using the entire time series of Sea-viewing Wide Field-of-view Sensor (SeaWiFS) space observations (1998–2010). Daily maps of PSCs have been determined using an empirical model based on a synoptic relationship between surface chlorophyll a and diagnostic pigments referred to different taxonomic groups. The analysis of micro-, nano- and pico-phytoplankton satellite time series (1998–2010) describes, quantitatively, the algal assemblage structure over the basin and reveals that the main contribution to chlorophyll a in most of the Mediterranean Sea comes from the pico-phytoplankton component, especially in nutrient-poor environments. Regions with different and peculiar features are the Northwestern Mediterranean Sea, the Alborán Sea and several coastal areas, such as the North Adriatic Sea. In these areas, local interactions between physical and biological components modulate the composition of the three phytoplankton size classes. It results that, during the spring bloom season, micro-phytoplankton dominates in areas of intense vertical winter mixing and deep/intermediate water formation, while in coastal areas micro-phytoplankton dominates in all seasons because of the nutrient supply from the terrestrial inputs. In the Alborán Sea, where the Atlantic inflow modulates the nutrient availability, any predominance of one class over the other two has been observed. The nano-phytoplankton component instead remains widespread over the entire basin along the year, and its contribution to chlorophyll a is of the order of 30–40 %. The largest inter-annual signal occurs in the Northwestern Mediterranean Sea, driven by the year-to-year variation in intensity and extension of the spring bloom, followed by the Alborán Sea, in which the inter-annual variability is strongly modulated by the Atlantic inflow. In absence of sufficient in situ data of community composition, the satellite-based analysis demonstrated that pico-, nano- and micro-phytoplankton classes often coexist. The predominance of one group over the other ones is strongly dependent on the physical and biological processes occurring at the mesoscale. These processes directly influence the nutrient and light availability, which are the principal forcing for the algae growth

Observing The Mediterranean Sea from space: 21 years of Pathfinder-AVHRR Sea Surface Temperatures (1985 to 2005). Re-analysis and validation

International audienceThe time series of satellite infrared AVHRR data from 1985 to 2005 has been used to produce a daily series of optimally interpolated SST maps over the regular grid of the operational MFSTEP OGCM model of the Mediterranean basin. A complete validation of this OISST (Optimally Interpolated Sea Surface Temperature) product with in situ measurements has been performed in order to exclude any possibility of spurious trends due to instrumental calibration errors/shifts or algorithms malfunctioning related to local geophysical factors. The validation showed that satellite OISST is able to reproduce in situ measurements with a mean bias of less than 0.1°C and RMSE of about 0.5°C and that errors do not drift with time or with the percent interpolation error

Effects of vertical shear in modelling horizontal oceanic dispersion

Abstract. The effect of vertical shear on the horizontal dispersion properties of passive tracer particles on the continental shelf of the South Mediterranean is investigated by means of observation and model data. In situ current measurements reveal that vertical gradients of horizontal velocities in the upper mixing layer decorrelate quite fast ( ∼  1 day), whereas an eddy-permitting ocean model, such as the Mediterranean Forecasting System, tends to overestimate such decorrelation time because of finite resolution effects. Horizontal dispersion, simulated by the Mediterranean sea Forecasting System, is mostly affected by: (1) unresolved scale motions, and mesoscale motions that are largely smoothed out at scales close to the grid spacing; (2) poorly resolved time variability in the profiles of the horizontal velocities in the upper layer. For the case study we have analysed, we show that a suitable use of deterministic kinematic parametrizations is helpful to implement realistic statistical features of tracer dispersion in two and three dimensions. The approach here suggested provides a functional tool to control the horizontal spreading of small organisms or substance concentrations, and is thus relevant for marine biology, pollutant dispersion as well as oil spill applications

Particle fluxes in the deep Eastern Mediterranean basins: the role of ocean vertical velocities

This paper analyzes the relationship between deep sedimentary fluxes and ocean current vertical velocities in an offshore area of the Ionian Sea, the deepest basin of the Eastern Mediterranean Sea. Sediment trap data are collected at 500 m and 2800 m depth in two successive moorings covering the period September 1999–May 2001. A tight coupling is observed between the upper and deep traps and the estimated particle sinking rates are more than 200 m day−1. The current vertical velocity field is computed from a 1/16°×1/16° Ocean General Circulation Model simulation and from the wind stress curl. Current vertical velocities are larger and more variable than Ekman vertical velocities, yet the general patterns are alike. Current vertical velocities are generally smaller than 1 m day−1: we therefore exclude a direct effect of downward velocities in determining high sedimentation rates. However we find that upward velocities in the subsurface layers of the water column are positively correlated with deep particle fluxes. We thus hypothesize that upwelling would produce an increase in upper ocean nutrient levels – thus stimulating primary production and grazing – a few weeks before an enhanced vertical flux is found in the sediment traps. High particle sedimentation rates may be attained by means of rapidly sinking fecal pellets produced by gelatinous macro-zooplankton. Other sedimentation mechanisms, such as dust deposition, are also considered in explaining large pulses of deep particle fluxes. The fast sinking rates estimated in this study might be an evidence of the efficiency of the biological pump in sequestering organic carbon from the surface layers of the deep Eastern Mediterranean basins

Particle fluxes in the deep Eastern Mediterranean basins: the role of ocean vertical velocities

This paper analyzes the relationship between deep sedimentary fluxes and ocean current vertical velocities in an offshore area of the Ionian Sea, the deepest basin of the Eastern Mediterranean Sea. Sediment trap data are collected at 500m and 2800m depth in two successive moorings covering the period September 1999–May 2001. A tight coupling is observed between the upper and deep traps and the estimated particle sinking rates are more than 200mday−1. The current vertical velocity field is computed from a 1/16 ×1/16 Ocean General Circulation Model simulation and from the wind stress curl. Current vertical velocities are larger and more variable than Ekman vertical velocities, yet the general patterns are alike. Current vertical velocities are generally smaller than 1mday−1: we therefore exclude a direct effect of downward velocities in determining high sedimentation rates. However we find that upward velocities in the subsurface layers of the water column are positively correlated with deep particle fluxes. We thus hypothesize that upwelling would produce an increase in upper ocean nutrient levels – thus stimulating primary production and grazing – a few weeks before an enhanced vertical flux is found in the sediment traps. High particle sedimentation rates may be attained by means of rapidly sinking fecal pellets produced by gelatinous macro-zooplankton. Other sedimentation mechanisms, such as dust deposition, are also considered in explaining large pulses of deep particle fluxes. The fast sinking rates estimated in this study might be an evi- Correspondence to: L. Patara ([email protected]) dence of the efficiency of the biological pump in sequestering organic carbon from the surface layers of the deep Eastern Mediterranean basins

Particle fluxes in the deep Eastern Mediterranean basins: the role of ocean vertical velocities

This paper analyzes the relationship between deep sedimentary fluxes and ocean current vertical velocities in an offshore area of the Ionian Sea, the deepest basin of the Eastern Mediterranean Sea. Sediment trap data are collected at 500 m and 2800 m depth in two successive moorings covering the period September 1999 – May 2001. A tight coupling is observed between the upper and deep traps and the deduced particle settling rates are larger than 200 m/day. The current vertical velocity field is computed from a high resolution Ocean General Circulation Model (OGCM) simulation and from the wind stress curl. Values are generally smaller than 1 m/day: we therefore exclude a direct effect of downward vertical velocities in determining sedimentation rates. However we find that upward vertical velocities in the subsurface layers of the water column are significantly correlated with deep particle fluxes. We thus hypothesize that upwelling would produce an increase in upper ocean nutrient levels - thus stimulating primary productivity and grazing - a few weeks before an enhanced vertical flux is found in the sediment traps. The role of ocean vertical velocities on deep particle fluxes would therefore be indirect. High particle sedimentation rates may be attained by means of rapidly sinking fecal pellets produced by gelatinous macro-zooplankton organisms. Other sedimentation mechanisms, such as dust deposition, are also taken into account in explaining large pulses of deep particle fluxes

Ecoregions in the Mediterranean Sea Through the Reanalysis of Phytoplankton Functional Types and Carbon Fluxes

In this work we produced a long‐term reanalysis of the phytoplankton community structure in the Mediterranean Sea and used it to define ecoregions. These were based on the spatial variability of the phytoplankton type fractions and their influence on selected carbon fluxes. A regional ocean color product of four phytoplankton functional types (PFTs; diatoms, dinoflagellates, nanophytoplankton, and picophytoplankton) was assimilated into a coupled physical‐biogeochemical model of the Mediterranean Sea (Proudman Oceanographic Laboratory Coastal Ocean Modelling System‐European Regional Seas Ecosystem Model, POLCOMS–ERSEM) by using a 100‐member ensemble Kalman filter, in a reanalysis simulation for years 1998–2014. The reanalysis outperformed the reference simulation in representing the assimilated ocean color PFT fractions to total chlorophyll, although the skill for the ocean color PFT concentrations was not improved significantly. The reanalysis did not impact noticeably the reference simulation of not assimilated in situ observations, with the exception of a slight bias reduction for the situ PFT concentrations, and a deterioration of the phosphate simulation. We found that the Mediterranean Sea can be subdivided in three PFT‐based ecoregions, derived from the spatial variability of the PFT fraction dominance or relevance. Picophytoplankton dominates the largest part of open ocean waters; microphytoplankton dominates in a few, highly productive coastal spots near large‐river mouths; nanophytoplankton is relevant in intermediate‐productive coastal and Atlantic‐influenced waters. The trophic and carbon sedimentation efficiencies are highest in the microphytoplankton ecoregion and lowest in the picophytoplankton and nanophytoplankton ecoregions. The reanalysis and regionalization offer new perspectives on the variability of the structure and functioning of the phytoplankton community and related biogeochemical fluxes, with foreseeable applications in Blue Growth of the Mediterranean Sea

Hindcast of oil-spill pollution during the Lebanon crisis in the Eastern Mediterranean, July–August 2006

MOON (Mediterranean Operational Oceanography Network http://www.moon-oceanforecasting.eu) pro- vides near-real-time information on oil-spill detection (ocean color and SAR) and predictions [ocean fore- casts (MFS and CYCOFOS) and oil-spill predictions (MEDSLIK)]. We employ this system to study the Lebanese oil-pollution crisis in summer 2006 and thus to assist regional and local decision makers in Europe, regionally and locally. The MEDSLIK oil-spill predictions obtained using CYCOFOS high-resolution ocean fields are compared with those obtained using lower-resolution MFS hydrodynamics, and both are validated against satellite observations. The predicted beached oil distributions along the Lebanese and Syrian coasts are compared with in situ observations. The oil-spill predictions are able to simulate the northward movement of the oil spill, with the CYCO- FOS predictions being in better agreement with satellite observations. Among the free MEDSLIK param- eters tested in the sensitivity experiments, the drift factor appears to be the most relevant to improve the quality of the results.The paper was produced using the INGV MFS forecasting-sys- tem product and the OC-UCY CYCOFOS forecasting-system prod- ucts. The MODIS satellite data products were processed at the GOS-CNR-ISAC Rome laboratory using the SeaDAS software devel- oped by NASA GSFC, Greenbelt, Maryland, the HDFLook software developed by The Laboratoire d’Optique Atmosphérique, Univer- sity of Lille, France, and the MS2GT tool box developed by the Uni- versity of Colorado. Procedures for oil-spill detection were developed in the ENVI environment. Processed ENVISAT-ASAR data were made available by Telespazio and JRC. Part of this work was carried out with the support of the PRIMI project (ASI Contract No. I/094/06/0) financed by the Italian Space Agency (ASI).In press4.6. Oceanografia operativa per la valutazione dei rischi in aree marineJCR Journalreserve

Hindcast of oil-spill pollution during the Lebanon crisis in the Eastern Mediterranean, July–August 2006

MOON (Mediterranean Operational Oceanography Network http://www.moon-oceanforecasting.eu) provides near-real-time information on oil-spill detection (ocean color and SAR) and predictions [ocean forecasts (MFS and CYCOFOS) and oil-spill predictions (MEDSLIK)]. We employ this system to study the Lebanese oil-pollution crisis in summer 2006 and thus to assist regional and local decision makers in Europe, regionally and locally. The MEDSLIK oil-spill predictions obtained using CYCOFOS high-resolution ocean fields are compared with those obtained using lower-resolution MFS hydrodynamics, and both are validated against satellite observations. The predicted beached oil distributions along the Lebanese and Syrian coasts are compared with in situ observations. The oil-spill predictions are able to simulate the northward movement of the oil spill, with the CYCOFOS predictions being in better agreement with satellite observations. Among the free MEDSLIK parameters tested in the sensitivity experiments, the drift factor appears to be the most relevant to improve the quality of the results.Published140–153JCR Journalrestricte

Effects of vertical shear in modelling horizontal oceanic dispersion

The effect of vertical shear on the horizontal dispersion properties of passive tracer particles on the continental shelf of the South Mediterranean is investigated by means of observation and model data. In situ current measurements reveal that vertical gradients of horizontal velocities in the upper mixing layer decorrelate quite fast ( ∼  1 day), whereas an eddy-permitting ocean model, such as the Mediterranean Forecasting System, tends to overestimate such decorrelation time because of finite resolution effects. Horizontal dispersion, simulated by the Mediterranean sea Forecasting System, is mostly affected by: (1) unresolved scale motions, and mesoscale motions that are largely smoothed out at scales close to the grid spacing; (2) poorly resolved time variability in the profiles of the horizontal velocities in the upper layer. For the case study we have analysed, we show that a suitable use of deterministic kinematic parametrizations is helpful to implement realistic statistical features of tracer dispersion in two and three dimensions. The approach here suggested provides a functional tool to control the horizontal spreading of small organisms or substance concentrations, and is thus relevant for marine biology, pollutant dispersion as well as oil spill applications