358 research outputs found
Integrated hydrological modelling of a managed coastal Mediterranean wetland (Rhone delta, France): initial calibration
This paper presents a model of a heavily managed coastal Mediterranean wetland. The hydrosystem studied , called ``Ile de Camargue', is the central part of the Rhone river delta. It comprises flat agricultural drainage basins, marshes, and shallow brackish lagoons whose connection to the sea is managed. This hydrosystem is subject to strong natural hydrological variability due to the combination of a Mediterranean climate and the artificial hydrological regime imposed by flooded rice cultivation. To quantify the hydrological balance at different spatial and temporal scales, a simplified model is developed — including the basin and the lagoons — using a time step that enables the temporal dynamic to be reproduced that is adapted to data availability. This modelling task takes into account the functioning of the natural and anthropogenic components of the hydrosystem. A conceptual approach is used for modelling drainage from the catchment, using a GIS to estimate water input for rice irrigation. The lagoon system is modelled using a two-dimensional finite element hydrodynamic model. Simulated results from the hydrodynamic model run under various hydro-climatic forcing conditions (water level, wind speed and direction, sea connection) are used to calculate hydraulic exchanges between lagoon sub units considered as boxes. Finally, the HIC ('Hydrologie de l’Ile de Camargue') conceptual model is applied to simulate the water inputs and exchanges between the different units, together with the salt balance in the hydrosystem during a calibration period.</p> <p style='line-height: 20px;'><b>Keywords: </b>water management,conceptual hydrological model, hydrodynamic model, box model, GIS, Rhone delta, Camargue
Patterns of earthworm, enchytraeid and nematode diversity and community structure in urban soils of different ages
From Antenna to Antenna: Lateral Shift of Olfactory Memory Recall by Honeybees
Honeybees, Apis mellifera, readily learn to associate odours with sugar rewards and we show here that recall of the olfactory memory, as demonstrated by the bee extending its proboscis when presented with the trained odour, involves first the right and then the left antenna. At 1–2 hour after training using both antennae, recall is possible mainly when the bee uses its right antenna but by 6 hours after training a lateral shift has occurred and the memory can now be recalled mainly when the left antenna is in use. Long-term memory one day after training is also accessed mainly via the left antenna. This time-dependent shift from right to left antenna is also seen as side biases in responding to odour presented to the bee's left or right side. Hence, not only are the cellular events of memory formation similar in bees and vertebrate species but also the lateralized networks involved may be similar. These findings therefore seem to call for remarkable parallel evolution and suggest that the proper functioning of memory formation in a bilateral animal, either vertebrate or invertebrate, requires lateralization of processing
The practices of apartheid as a war crime: a critical analysis
The human suffering caused by the political ideology of apartheid in South Africa during the Apartheid era (1948-1994) prompted worldwide condemnation and a variety of diplomatic and legal responses. Amongst these responses was the attempt to have apartheid recognised both as a crime against humanity in the 1973 Apartheid Convention as well as a war crime in Article 85(4)(c) of Additional Protocol I. This article examines the origins, nature and current status of the practices of apartheid as a war crime and its possible application to the Israeli-Palestinian conflict
Determinants of the voltage dependence of G protein modulation within calcium channel β subunits
CaVβ subunits of voltage-gated calcium channels contain two conserved domains, a src-homology-3 (SH3) domain and a guanylate kinase-like (GK) domain with an intervening HOOK domain. We have shown in a previous study that, although Gβγ-mediated inhibitory modulation of CaV2.2 channels did not require the interaction of a CaVβ subunit with the CaVα1 subunit, when such interaction was prevented by a mutation in the α1 subunit, G protein modulation could not be removed by a large depolarization and showed voltage-independent properties (Leroy et al., J Neurosci 25:6984–6996, 2005). In this study, we have investigated the ability of mutant and truncated CaVβ subunits to support voltage-dependent G protein modulation in order to determine the minimal domain of the CaVβ subunit that is required for this process. We have coexpressed the CaVβ subunit constructs with CaV2.2 and α2δ-2, studied modulation by the activation of the dopamine D2 receptor, and also examined basal tonic modulation. Our main finding is that the CaVβ subunit GK domains, from either β1b or β2, are sufficient to restore voltage dependence to G protein modulation. We also found that the removal of the variable HOOK region from β2a promotes tonic voltage-dependent G protein modulation. We propose that the absence of the HOOK region enhances Gβγ binding affinity, leading to greater tonic modulation by basal levels of Gβγ. This tonic modulation requires the presence of an SH3 domain, as tonic modulation is not supported by any of the CaVβ subunit GK domains alone
Live to cheat another day: bacterial dormancy facilitates the social exploitation of beta-lactamases
The breakdown of antibiotics by β-lactamases may be cooperative, since resistant cells can detoxify their environment and facilitate the growth of susceptible neighbours. However, previous studies of this phenomenon have used artificial bacterial vectors or engineered bacteria to increase the secretion of β-lactamases from cells. Here, we investigated whether a broad-spectrum β-lactamase gene carried by a naturally occurring plasmid (pCT) is cooperative under a range of conditions. In ordinary batch culture on solid media, there was little or no evidence that resistant bacteria could protect susceptible cells from ampicillin, although resistant colonies could locally detoxify this growth medium. However, when susceptible cells were inoculated at high densities, late-appearing phenotypically susceptible bacteria grew in the vicinity of resistant colonies. We infer that persisters, cells that have survived antibiotics by undergoing a period of dormancy, founded these satellite colonies. The number of persister colonies was positively correlated with the density of resistant colonies and increased as antibiotic concentrations decreased. We argue that detoxification can be cooperative under a limited range of conditions: if the toxins are bacteriostatic rather than bacteridical; or if susceptible cells invade communities after resistant bacteria; or if dormancy allows susceptible cells to avoid bactericides. Resistance and tolerance were previously thought to be independent solutions for surviving antibiotics. Here, we show that these are interacting strategies: the presence of bacteria adopting one solution can have substantial effects on the fitness of their neighbours
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Genomic and phenotypic characterization of in vitro-generated Chlamydia trachomatis recombinants
Background: Pre-genomic and post-genomic studies demonstrate that chlamydiae actively recombine in vitro and
in vivo, although the molecular and cellular biology of this process is not well understood. In this study, we
determined the genome sequence of twelve Chlamydia trachomatis recombinants that were generated in vitro
under antibiotic selection. These strains were used to explore the process of recombination in Chlamydia spp.,
including analysis of candidate recombination hotspots, and to correlate known C. trachomatis in vitro phenotypes
with parental phenotypes and genotypes.
Results: Each of the 190 examined recombination events was the product of homologous recombination, and no
candidate targeting motifs were identified at recombination sites. There was a single deletion event in one
recombinant progeny that resulted in the removal of 17.1 kilobases between two rRNA operons. There was no
evidence for preference for any specific region of the chromosome for recombination, and analyses of a total of
over 200 individual recombination events do not provide any support for recombination hotspots in vitro. Two
measurable phenotypes were analyzed in these studies. First, the efficiency of attachment to host cells in the
absence of centrifugation was examined, and this property segregated to regions of the chromosome that carry
the polymorphic membrane protein (Pmp) genes. Second, the formation of secondary inclusions within cells varied
among recombinant progeny, but this did not cleanly segregate to specific regions of the chromosome.
Conclusions: These experiments examined the process of recombination in C. trachomatis and identified tools that
can be used to associate phenotype with genotype in recombinant progeny. There were no data supporting the
hypothesis that particular nucleotide sequences are preferentially used for recombination in vitro. Selected
phenotypes can be segregated by analysis of recombination, and this technology may be useful in preliminary
analysis of the relationship of genetic variation to phenotypic variation in the chlamydiae.Keywords: Attachment, Chlamydia, Secondary inclusions, Recombination, Hotspo
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The Broad-Spectrum Antiviral Compound ST-669 Restricts Chlamydial Inclusion Development and Bacterial Growth and Localizes to Host Cell Lipid Droplets within Treated Cells
Novel broad-spectrum antimicrobials are a critical component of a strategy for combating antibiotic-resistant pathogens. In this
study, we explored the activity of the broad-spectrum antiviral compound ST-669 for activity against different intracellular bacteria
and began a characterization of its mechanism of antimicrobial action. ST-669 inhibits the growth of three different species
of chlamydia and the intracellular bacterium Coxiella burnetii in Vero and HeLa cells but not in McCoy (murine) cells. The antichlamydial
and anti-C. burnetii activity spectrum was consistent with those observed for tested viruses, suggesting a common
mechanism of action. Cycloheximide treatment in the presence of ST-669 abrogated the inhibitory effect, demonstrating that
eukaryotic protein synthesis is required for tested activity. Immunofluorescence microscopy demonstrated that different chlamydiae
grow atypically in the presence of ST-669, in a manner that suggests the compound affects inclusion formation and organization.
Microscopic analysis of cells treated with a fluorescent derivative of ST-669 demonstrated that the compound localized
to host cell lipid droplets but not to other organelles or the host cytosol. These results demonstrate that ST-669 affects intracellular
growth in a host-cell-dependent manner and interrupts proper development of chlamydial inclusions, possibly through a
lipid droplet-dependent process
Report of the ACBS Task Force on the Strategies and Tactics of Contextual Behavioral Science Research
Throughout its history the strategy and tactics of contextual behavioral science (CBS) research have had distinctive features as compared to traditional behavioral science approaches. Continued progress in CBS research can be facilitated by greater clarity about how its strategy and tactics can be brought to bear on current challenges. The present white paper is the result of a 2 1/2-year long process designed to foster consensus among representative producers and consumers of CBS research about the best strategic pathway forward. The Task Force agreed that CBS research should be multilevel, process-based, multidimensional, prosocial, and pragmatic, and provided 33 recommendations to the CBS community arranged across these characteristics. In effect, this report provides a detailed research agenda designed to maximize the impact of CBS as a field. Scientists and practitioners are encouraged to mount this ambitious agenda
A multimodal approach for tracing lateralization along the olfactory pathway in the honeybee through electrophysiological recordings, morpho-functional imaging, and behavioural studies
Recent studies have revealed asymmetries between the left and right sides of
the brain in invertebrate species. Here we present a review of a series of
recent studies from our labs, aimed at tracing asymmetries at different stages
along the honeybee's (Apis mellifera) olfactory pathway. These include
estimates of the number of sensilla present on the two antennae, obtained by
scanning electron microscopy, as well as electroantennography recordings of the
left and right antennal responses to odorants. We describe investigative
studies of the antennal lobes, where multi-photon microscopy is used to search
for possible morphological asymmetries between the two brain sides. Moreover,
we report on recently published results obtained by two-photon calcium imaging
for functional mapping of the antennal lobe aimed at comparing patterns of
activity evoked by different odours. Finally, possible links to the results of
behavioural tests, measuring asymmetries in single-sided olfactory memory
recall, are discussed.Comment: 28 pages, 8 figure
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