Two closely related RecQ-helicases have antagonistic roles in homologous recombination and DNA repair in Arabidopsis thaliana

RecQ helicases are involved in the processing of DNA structures arising during replication, recombination, and repair throughout all kingdoms of life. Mutations of different RecQ homologues are responsible for severe human diseases, such as Blooms (BLM) or Werner (WRN) syndrome. The loss of RecQ function is often accompanied by hyperrecombination caused by a lack of crossover suppression. In the Arabidopsis genome seven different RecQ genes are present. Two of them (AtRECQ4A and 4B) arose because of a recent duplication and are still nearly 70% identical on a protein level. Knockout of these genes leads to antagonistic phenotypes: the RECQ4A mutant shows sensitivity to DNA-damaging agents, enhanced homologous recombination (HR) and lethality in a mus81 background. Moreover, mutation of RECQ4A partially suppresses the lethal phenotype of an AtTOP3alpha mutant, a phenomenon that had previously been demonstrated for RecQ homologues of unicellular eukaryotes only. Together, these facts strongly suggest that in plants RECQ4A is functionally equivalent to SGS1 of Saccharomyces cerevisiae and the mammalian BLM protein. In stark contrast, mutants of the closely related RECQ4B are not mutagen-sensitive, not viable in a mus81 background, and unable to suppress the induced lethality caused by loss of TOP3. Moreover, they are strongly impaired in HR. Thus, AtRECQ4B is specifically required to promote but not to suppress crossovers, a role in which it differs from all eukaryotic RecQ homologues known

Off-nuclear star formation and obscured activity in the luminous infrared galaxy NGC 2623

New optical Hubble Space Telescope (HST), Spitzer Space Telescope, and XMM observations of the luminous infrared galaxy (LIRG) NGC 2623 are presented. This galaxy was observed as part of the Great Observatories All-sky LIRG Survey (GOALS). The prominent 3.2 kpc southern extension to the nucleus has been resolved by HST observations into ~100 star clusters, making it one of the richest off-nuclear concentrations of bright clusters observed in GOALS. The clusters have M_(F555W) ~-6.6 to -12.6 mag, which is within the magnitude range of Antennae galaxy clusters and in excess of 30 Doradus clusters at the high end. Their optical colors are primarily consistent with ages of ~1–100 Myr. Archival GALEX data show the off-nuclear region to be extremely bright in the far-ultraviolet, being equivalent in luminosity to the resolved nuclear region at 0.15 µm, but becoming less energetically significant at increasing wavelengths. In addition, [Ne v] 14.3 µm emission is detected with Spitzer IRS, confirming the inference from the X-ray and radio data that an active galactic nucleus (AGN) is present. Thus, the off-nuclear optical clusters are associated with a secondary burst of activity corresponding to a star formation rate ~0.1–0.2 M⊙ yr^(-1); the bulk of infrared (and thus bolometric) luminosity is generated via star formation and an AGN embedded behind dust within the inner kiloparsec of the system. If the infrared luminosity is primarily reprocessed starlight, the off-nuclear starburst accounts for <1% of the present star formation in NGC 2623

Life cycle assessment of Polychlorinated Biphenyl contaminated soil remediation processes

Goal and scope. A life-cycle assessment (LCA) was performed to evaluate the environmental impacts of the remediation of industrial soils contaminated by polychlorobiphenyl (PCB). Two new bioremediation treatment options were compared with the usual incineration process. In this attributional LCA, only secondary impacts were considered. The contaminated soil used for the experiments contained 200 mg of PCB per kg. Methods. Three off-site treatments scenarios were studied: 1) bioremediation with mechanical aeration, 2) bioremediation with electric aeration and 3) incineration with natural gas. Bioremediation processes were designed from lab-scale, scale-up and pilot experiments. The incineration technique was inspired by a French plant. A semi-quantitative uncertainty analysis was performed on the data. Environmental impacts were evaluated with the CML 2001 method using the Simapro software program. Results and discussion. In most compared categories, the bioremediation processes are favorable. Of the bioremediation options, the lowest environmental footprint was observed for electric aeration. The uncertainty analysis supported the results that compared incineration and bioremediation but decreased the difference between the options of aeration. The distance of transportation was one of the most sensitive parameters, especially for bioremediation. At equal distances between the polluted sites and the treatment plant, bioremediation had fewer impacts than incineration in eight out of thirteen categories. Conclusions. The use of natural gas for the incineration process generated the most impacts. Irrespective of the aeration option, bioremediation was better than incineration. Recommendations. The time of treatment should be taken into account. More precise and detailed data are required for the incineration scenario. More parameters of biological treatments should be measured. LCA results should be completed using ecological and health risk assessment and an acceptability evaluation

The distribution of volatile elements during rocky planet formation

Core segregation and atmosphere formation are two of the major processes that redistribute the volatile elements—hydrogen (H), carbon (C), nitrogen (N), and sulfur (S)—in and around rocky planets during their formation. The volatile elements by definition accumulate in gaseous reservoirs and form atmospheres. However, under conditions of early planet formation, these elements can also behave as siderophiles (i.e., iron-loving) and become concentrated in core-forming metals. Current models of core formation suggest that metal-silicate reactions occurred over a wide pressure, temperature, and compositional space to ultimately impose the chemistries of the cores and silicate portions of rocky planets. Additionally, the solubilities of volatile elements in magmas determine their transfer between the planetary interiors and atmospheres, which has recently come into sharper focus in the context of highly irradiated, potentially molten exoplanets. Recently, there has been a significant push to experimentally investigate the metal-silicate and magma-gas exchange coefficients for volatile elements over a wide range of conditions relevant to rocky planet formation. Qualitatively, results from the metal-silicate partitioning studies suggest that cores of rocky planets could be major reservoirs of the volatile elements though significant amounts will remain in mantles. Results from solubility studies imply that under oxidizing conditions, most H and S are sequestered in the magma ocean, while most N is outgassed to the atmosphere, and C is nearly equally distributed between the atmosphere and the interior. Under reducing conditions, nearly all N dissolves in the magma ocean, the atmosphere becomes the dominant C reservoir, while H becomes more equally distributed between the interior and the atmosphere, and S remains dominantly in the interior. These chemical trends bear numerous implications for the chemical differentiation of rocky planets and the formation and longevity of secondary atmospheres in the early Solar System and exoplanetary systems. Further experimental and modeling efforts are required to understand the potential of chemical and physical disequilibria during core formation and magma ocean crystallization and to constrain the distributions of volatile elements in the interiors and atmospheres of rocky planets through their formation and long-term geologic evolution.</p

A Push-Pull System to Reduce House Entry of Malaria Mosquitoes.

Mosquitoes are the dominant vectors of pathogens that cause infectious diseases such as malaria, dengue, yellow fever and filariasis. Current vector control strategies often rely on the use of pyrethroids against which mosquitoes are increasingly developing resistance. Here, a push-pull system is presented, that operates by the simultaneous use of repellent and attractive volatile odorants. Experiments were carried out in a semi-field set-up: a traditional house which was constructed inside a screenhouse. The release of different repellent compounds, para-menthane-3,8-diol (PMD), catnip oil e.o. and delta-undecalactone, from the four corners of the house resulted in significant reductions of 45% to 81.5% in house entry of host-seeking malaria mosquitoes. The highest reductions in house entry (up to 95.5%), were achieved by simultaneously repelling mosquitoes from the house (push) and removing them from the experimental set-up using attractant-baited traps (pull). The outcome of this study suggests that a push-pull system based on attractive and repellent volatiles may successfully be employed to target mosquito vectors of human disease. Reductions in house entry of malaria vectors, of the magnitude that was achieved in these experiments, would likely affect malaria transmission. The repellents used are non-toxic and can be used safely in a human environment. Delta-undecalactone is a novel repellent that showed higher effectiveness than the established repellent PMD. These results encourage further development of the system for practical implementation in the field

Risk of chronic kidney disease after cancer nephrectomy.

The incidence of early stage renal cell carcinoma (RCC) is increasing and observational studies have shown equivalent oncological outcomes of partial versus radical nephrectomy for stage I tumours. Population studies suggest that compared with radical nephrectomy, partial nephrectomy is associated with decreased mortality and a lower rate of postoperative decline in kidney function. However, rates of chronic kidney disease (CKD) in patients who have undergone nephrectomy might be higher than in the general population. The risks of new-onset or accelerated CKD and worsened survival after nephrectomy might be linked, as kidney insufficiency is a risk factor for cardiovascular disease and mortality. Nephron-sparing approaches have, therefore, been proposed as the standard of care for patients with type 1a tumours and as a viable option for those with type 1b tumours. However, prospective data on the incidence of de novo and accelerated CKD after cancer nephrectomy is lacking, and the only randomized trial to date was closed prematurely. Intrinsic abnormalities in non-neoplastic kidney parenchyma and comorbid conditions (including diabetes mellitus and hypertension) might increase the risks of CKD and RCC. More research is needed to better understand the risk of CKD post-nephrectomy, to develop and validate predictive scores for risk-stratification, and to optimize patient management

Variation in the attachment of Streptococcus pneumoniae to human pharyngeal epithelial cells after treatment with S-carboxymethylcysteine

S-carboxymethylcysteine (S-CMC) is a mucolytic agent that can prevent respiratory infection by decreasing the attachment of respiratory pathogens to human pharyngeal epithelial cells (HPECs). Streptococcus pneumoniae is a major cause of respiratory infections. A previous study revealed that treatment of S. pneumoniae with S-CMC caused a decrease in the attachment of this bacterium to HPECs. In the present study we found that the effect of S-CMC varied according to hosts and strains. S-CMC treatment altered the surface structure of S. pneumoniae, resulting in a decrease of attachment, without affecting the virulence of the bacteria. © 2008 Japanese Society of Chemotherapy and The Japanese Association for Infectious Diseases