5,249 research outputs found

    Generation of curved high-order meshes with optimal quality and geometric accuracy

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    We present a novel methodology to generate curved high-order meshes featuring optimal mesh quality and geometric accuracy. The proposed technique combines a distortion measure and a geometric L2-disparity measure into a single objective function. While the element distortion term takes into account the mesh quality, the L2-disparity term takes into account the geometric error introduced by the mesh approximation to the target geometry. The proposed technique has several advantages. First, we are not restricted to interpolative meshes and therefore, the resulting mesh approximates the target domain in a non-interpolative way, further increasing the geometric accuracy. Second, we are able to generate a series of meshes that converge to the actual geometry with expected rate while obtaining high-quality elements. Third, we show that the proposed technique is robust enough to handle real-case geometries that contain gaps between adjacent entities.Peer ReviewedPostprint (published version

    Sinorhizobium fredii Strains HH103 and NGR234 Form Nitrogen Fixing Nodules With Diverse Wild Soybeans (Glycine soja) From Central China but Are Ineffective on Northern China Accessions

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    Sinorhizobium fredii indigenous populations are prevalent in provinces of Central China whereas Bradyrhizobium species (Bradyrhizobium japonicum, B. diazoefficiens, B. elkanii, and others) are more abundant in northern and southern provinces. The symbiotic properties of different soybean rhizobia have been investigated with 40 different wild soybean (Glycine soja) accessions from China, Japan, Russia, and South Korea. Bradyrhizobial strains nodulated all the wild soybeans tested, albeit efficiency of nitrogen fixation varied considerably among accessions. The symbiotic capacity of S. fredii HH103 with wild soybeans from Central China was clearly better than with the accessions found elsewhere. S. fredii NGR234, the rhizobial strain showing the broadest host range ever described, also formed nitrogen-fixing nodules with different G. soja accessions from Central China. To our knowledge, this is the first report describing an effective symbiosis between S. fredii NGR234 and G. soja. Mobilization of the S. fredii HH103 symbiotic plasmid to a NGR234 pSym-cured derivative (strain NGR234C) yielded transconjugants that formed ineffective nodules with G. max cv. Williams 82 and G. soja accession CH4. By contrast, transfer of the symbiotic plasmid pNGR234a to a pSym-cured derivative of S. fredii USDA193 generated transconjugants that effectively nodulated G. soja accession CH4 but failed to nodulate with G. max cv. Williams 82. These results indicate that intra-specific transference of the S. fredii symbiotic plasmids generates new strains with unpredictable symbiotic properties, probably due to the occurrence of new combinations of symbiotic signals.España, Junta de Andalucía P11-CVI-7500España Ministerio de Economía y Competitividad BIO2016-78409-

    Unstructured and semi-structured hexahedral mesh generation methods

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    Discretization techniques such as the finite element method, the finite volume method or the discontinuous Galerkin method are the most used simulation techniques in ap- plied sciences and technology. These methods rely on a spatial discretization adapted to the geometry and to the prescribed distribution of element size. Several fast and robust algorithms have been developed to generate triangular and tetrahedral meshes. In these methods local connectivity modifications are a crucial step. Nevertheless, in hexahedral meshes the connectivity modifications propagate through the mesh. In this sense, hexahedral meshes are more constrained and therefore, more difficult to gener- ate. However, in many applications such as boundary layers in computational fluid dy- namics or composite material in structural analysis hexahedral meshes are preferred. In this work we present a survey of developed methods for generating structured and unstructured hexahedral meshes.Peer ReviewedPostprint (published version

    Size preserving mesh generation in adaptivity processes

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    It is well known that the variations of the element size have to be controlled in order to generate a high-quality mesh. Hence, several techniques have been developed to limit the gradient of the element size. Although these methods allow generating high-quality meshes, the obtained discretizations do not always reproduce the prescribed size function. Specifically, small elements may not be generated in a region where small element size is prescribed. This is critical for many practical simulations, where small elements are needed to reduce the error of the numerical simulation. To solve this issue, we present the novel size-preserving technique to control the mesh size function prescribed at the vertices of a background mesh. The result is a new size function that ensures a high-quality mesh with all the elements smaller or equal to the prescribed element size. That is, we ensure that the new mesh handles at least one element of the correct size at each local minima of the size function. In addition, the gradient of the size function is limited to obtain a high-quality mesh. Two direct applications are presented. First, we show that we can reduce the number of iterations to converge an adaptive process, since we do not need additional iterations to generate a valid mesh. Second, the size-preserving approach allows to generate quadri- lateral meshes that correctly preserves the prescribed element size.Peer ReviewedPostprint (published version

    Defining an2-disparity measure to check and improve the geometric accuracy of noninterpolating curved high-order meshes

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    We define an2-disparity measure between curved high-order meshes and parameterized manifolds in terms of an2norm. The main application of the proposed definition is to measure and improve the distance between a curved high-order mesh and a target parameterized curve or surface. The approach allows considering meshes with the nodes on top of the curve or surface (interpolative), or floating freely in the physical space (non-interpolative). To compute the disparity measure, the average of the squared point-wise differences is minimized in terms of the nodal coordinates of an auxiliary parametric high-order mesh. To improve the accuracy of approximating the target manifold with a noninterpolating curved high-order mesh, we minimize the square of the disparity measure expressed both in terms of the nodal coordinates of the physical and parametric curved high-order meshes. The proposed objective functions are continuously differentiable and thus, we are able to use minimization algorithms that require the first or the second derivatives of the objective function. Finally, we present several examples that show that the proposed methodology generates high-order approximations of the target manifold with optimal convergence rates for the geometric accuracy even when non-uniform parameterizations of the manifolds are prescribed. Accordingly, we can generate coarse curved high-order meshes significantly more accurate than finer low-order meshes that feature the same resolution.Peer ReviewedPostprint (author's final draft
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