862 research outputs found
Escuchar a los objetos
This experimental section includes some parts of the performative event “The materiality of transformations: Listening to objects”, which closed the 14th SIEF conference held in Santiago de Compostela in 2019. Barbara Kirshenblatt-Gimblett, Regina Bendix, Dorothy Noyes, Sharon Roseman and Francisco Cruces conversed on stage about the cultural meanings of a selection of personal objects. By unveiling the stories contained in mezuzahs, hair, a serving platter and a shawl, they put the methodological power of the object/story couplet to the test. The benefits of articulating narrativity with materiality; the silent power of things in everyday life; the embedded character of storytelling, and some of its affective, moral and celebratory virtues were highlighted. The final event can be seen at <https://vimeo.com/362078953> from minute 00:52:50 to 01:31:00.Esta sección experimental incluye algunas partes del evento performativo “La materialidad de las transformaciones: escuchar a los objetos”, que clausuró el XIV congreso de SIEF celebrado en Santiago de Compostela en 2019. Barbara Kirshenblatt-Gimblett, Regina Bendix, Dorothy Noyes, Sharon Roseman y Francisco Cruces conversaron sobre los significados culturales de una selección de objetos personales. Al desvelar las historias contenidas en mezuzahs, cabello, una fuente o un chal, se puso a prueba el poder metodológico del par objeto / historia, los beneficios de articular la narratividad con la materialidad y el silencioso poder de las cosas en la vida cotidiana. Se destacó el carácter incorporado de la narración y algunas de sus virtudes afectivas, morales y celebratorias. Este evento performativo se puede ver en <https://vimeo.com/362078953> from minute 00:52:50 to 01:31:00
Angler‐Caught Piscivore Diets Reflect Fish Community Changes in Lake Huron
Examination of angler‐caught piscivore stomachs revealed that Lake Trout Salvelinus namaycush, Chinook Salmon Oncorhynchus tshawytscha, and Walleyes Sander vitreus altered their diets in response to unprecedented declines in Lake Huron’s main‐basin prey fish community. Diets varied by predator species, season, and location but were nearly always dominated numerically by some combination of Alewife Alosa pseudoharengus, Rainbow Smelt Osmerus mordax, Emerald Shiner Notropis atherinoides, Round Goby Neogobius melanostomus, or terrestrial insects. Rainbow Trout Oncorhynchus mykiss (steelhead), Coho Salmon Oncorhynchus kisutch, and Atlantic Salmon Salmo salar had varied diets that reflected higher contributions of insects. Compared with an earlier (1983–1986) examination of angler‐caught predator fishes from Lake Huron, the contemporary results showed an increase in consumption of nontraditional prey (including conspecifics), use of smaller prey, and an increase in insects in the diet, suggesting that piscivores were faced with chronic prey limitation during this study. The management of all piscivores in Lake Huron will likely require consideration of the pervasive effects of changes in food webs, especially if prey fish remain at low levels.Received December 19, 2013; accepted June 30, 2014Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/141251/1/tafs1419.pd
Hsc70-induced changes in clathrin-auxilin cage structure suggest a role for clathrin light chains in cage disassembly
The molecular chaperone, Hsc70, together with its co-factor, auxilin, facilitates the ATP-dependent removal of clathrin during clathrin-mediated endocytosis in cells. We have used cryo-electron microscopy to determine the 3D structure of a complex of clathrin, auxilin401-910 and Hsc70 at pH 6 in the presence of ATP, frozen within 20 seconds of adding Hsc70 in order to visualize events that follow the binding of Hsc70 to clathrin and auxilin before clathrin disassembly. In this map, we observe density beneath the vertex of the cage that we attribute to bound Hsc70. This density emerges asymmetrically from the clathrin vertex, suggesting preferential binding by Hsc70 for one of the three possible sites at the vertex. Statistical comparison with a map of whole auxilin and clathrin previously published by us reveals the location of statistically significant differences which implicate involvement of clathrin light chains in structural rearrangements which occur after Hsc70 is recruited. Clathrin disassembly assays using light scattering suggest that loss of clathrin light chains reduces the efficiency with which auxilin facilitates this reaction. These data support a regulatory role for clathrin light chains in clathrin disassembly in addition to their established role in regulating clathrin assembly
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Serotonergic psychedelics LSD & psilocybin increase the fractal dimension of cortical brain activity in spatial and temporal domains.
Psychedelic drugs, such as psilocybin and LSD, represent unique tools for researchers investigating the neural origins of consciousness. Currently, the most compelling theories of how psychedelics exert their effects is by increasing the complexity of brain activity and moving the system towards a critical point between order and disorder, creating more dynamic and complex patterns of neural activity. While the concept of criticality is of central importance to this theory, few of the published studies on psychedelics investigate it directly, testing instead related measures such as algorithmic complexity or Shannon entropy. We propose using the fractal dimension of functional activity in the brain as a measure of complexity since findings from physics suggest that as a system organizes towards criticality, it tends to take on a fractal structure. We tested two different measures of fractal dimension, one spatial and one temporal, using fMRI data from volunteers under the influence of both LSD and psilocybin. The first was the fractal dimension of cortical functional connectivity networks and the second was the fractal dimension of BOLD time-series. In addition to the fractal measures, we used a well-established, non-fractal measure of signal complexity and show that they behave similarly. We were able to show that both psychedelic drugs significantly increased the fractal dimension of functional connectivity networks, and that LSD significantly increased the fractal dimension of BOLD signals, with psilocybin showing a non-significant trend in the same direction. With both LSD and psilocybin, we were able to localize changes in the fractal dimension of BOLD signals to brain areas assigned to the dorsal-attenion network. These results show that psychedelic drugs increase the fractal dimension of activity in the brain and we see this as an indicator that the changes in consciousness triggered by psychedelics are associated with evolution towards a critical zone.NIHR
Wellcome
NSF-NRT
MRC
Beckley Foundation
Alex Mosley Charitable Trust
Ad Astria Chandaria Foundation.
Neuro-psychoanalysis Foundation
Multidisplinary Association for Psychedelic Studies
The Heffter Research Institut
Evidence of Walleye Spawning in Maumee Bay, Lake Erie
Author Institution: Department of Fisheries and Wildlife, Michigan State University ; Single Spin Guide Service ; Ohio Department of Natural Resources, Division of Wildlife, Sandusky Fisheries Research UnitDuring the mid-1990s, anglers reported large numbers of walleye (Stizostedion vitreum) in spawning condition concentrated on shallow points adjacent to the Maumee River channel during spring. These fish had flowing eggs and semen and were suspected to be actively spawning in Maumee Bay. To investigate the potential of walleye spawning, we used a benthic pump to sample for eggs at five sites adjacent to the Maumee River channel and one site near Turtle Island in Maumee Bay on 5 April 1998, a time when walleye were actively spawning in rivers and on mid-lake reefs. We found walleye eggs at each of the six sites sampled. Relative abundance of eggs ranged from 17 to 2,105 per 2-min sample, with a mean of 459 (±232). Egg viability ranged from 33 to 54% across the sites and 10% of the viable walleye eggs were observed to be in late stages of embryonic development indicating that egg survival to hatching is likely. These results are the first documentation of walleye spawning in Maumee Bay, indicating that Maumee Bay is a viable spawning location for walleye, possibly representing an important source of recruitment for the Lake Erie stock
Deciphering the folding kinetics of transmembrane helical proteins
Nearly a quarter of genomic sequences and almost half of all receptors that
are likely to be targets for drug design are integral membrane proteins.
Understanding the detailed mechanisms of the folding of membrane proteins is a
largely unsolved, key problem in structural biology. Here, we introduce a
general model and use computer simulations to study the equilibrium properties
and the folding kinetics of a -based two helix bundle fragment
(comprised of 66 amino-acids) of Bacteriorhodopsin. Various intermediates are
identified and their free energy are calculated toghether with the free energy
barrier between them. In 40% of folding trajectories, the folding rate is
considerably increased by the presence of non-obligatory intermediates acting
as traps. In all cases, a substantial portion of the helices is rapidly formed.
This initial stage is followed by a long period of consolidation of the helices
accompanied by their correct packing within the membrane. Our results provide
the framework for understanding the variety of folding pathways of helical
transmembrane proteins
Two-Dimensional Echocardiography Estimates of Fetal Ventricular Mass throughout Gestation.
BACKGROUND: Two-dimensional (2D) ultrasound quality has improved in recent years. Quantification of cardiac dimensions is important to screen and monitor certain fetal conditions. We assessed the feasibility and reproducibility of fetal ventricular measures using 2D echocardiography, reported normal ranges in our cohort, and compared estimates to other modalities. METHODS: Mass and end-diastolic volume were estimated by manual contouring in the four-chamber view using TomTec Image Arena 4.6 in end diastole. Nomograms were created from smoothed centiles of measures, constructed using fractional polynomials after log transformation. The results were compared to those of previous studies using other modalities. RESULTS: A total of 294 scans from 146 fetuses from 15+0 to 41+6 weeks of gestation were included. Seven percent of scans were unanalysable and intraobserver variability was good (intraclass correlation coefficients for left and right ventricular mass 0.97 [0.87-0.99] and 0.99 [0.95-1.0], respectively). Mass and volume increased exponentially, showing good agreement with 3D mass estimates up to 28 weeks of gestation, after which our measurements were in better agreement with neonatal cardiac magnetic resonance imaging. There was good agreement with 4D volume estimates for the left ventricle. CONCLUSION: Current state-of-the-art 2D echocardiography platforms provide accurate, feasible, and reproducible fetal ventricular measures across gestation, and in certain circumstances may be the modality of choice
Structural analysis of X-Linked Retinoschisis mutations reveals distinct classes which differentially effect retinoschisin function
Retinoschisin, an octameric retinal-specific protein, is essential for retinal architecture with mutations causing X-linked retinoschisis (XLRS), a monogenic form of macular degeneration. Most XLRS-associated mutations cause intracellular retention, however a subset are secreted as octamers and the cause of their pathology is ill-defined. Therefore, here we investigated the solution structure of the retinoschisin monomer and the impact of two XLRS-causing mutants using a combinatorial approach of biophysics and cryo-EM. The retinoschisin monomer has an elongated structure which persists in the octameric assembly. Retinoschisin forms a dimer of octamers with each octameric ring adopting a planar propeller structure. Comparison of the octamer with the hexadecamer structure indicated little conformational change in the retinoschisin octamer upon dimerization, suggesting that the octamer provides a stable interface for construction of the hexadecamer. The H207Q XLRS-associated mutation was found in the interface between octamers and destabilized both monomeric and octameric retinoschisin. Octamer dimerization is consistent with the adhesive function of retinoschisin supporting interactions between retinal cell layers, so disassembly would prevent structural coupling between opposing membranes. In contrast, cryo-EM structural analysis of the R141H mutation at ~4.2Å resolution was found to only cause a subtle conformational change in the propeller tips, potentially perturbing an interaction site. Together, these findings support distinct mechanisms of pathology for two classes of XLRS-associated mutations in the retinoschisin assembly
A scientific basis for restoring fish spawning habitat in the St. Clair and Detroit Rivers of the Laurentian Great Lakes
Peer Reviewedhttp://deepblue.lib.umich.edu/bitstream/2027.42/110848/1/rec12159.pd
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