895 research outputs found
Structure of a trinuclear dizirconium-aluminum (Zr_2Al) µ-ketone complex with a bridging trigonal-bipyramidal methyl group
The reaction of a zirconocene acyl chloride with 0.5 equiv of trimethylaluminum results in the formation of the trinuclear Zr_2Al complex [Cp_2Zr(η^2(C, O)-OC-(CH_3)_2]_2(µ-AIMe_2Χ-µMe), which contains a trigonal-bipyramidal bridging methyl group. The complex crystallizes in the monoclinic system, in space group P2_1ln (C^5_(2h) No. 14), with a = 10.574 (1) Å, b = 16.456 (2) Å, c =16.763 (2) Å, β = 103.71 (1)°, V = 2833.6 (9) Å^3, and Z = 4. This is one of the few structures that contains a bridging methyl group with a near-trigonal-bipyramidal structure in which the metals occupy the axial positions and the three hydrogen atoms are in the equatorial plane
Adam and Eve, Designed Diversity, and Allele Frequencies
Theistic evolutionists present multiple genetic arguments against a literal Adam and Eve. One key argument asserts it would be impossible for a single human couple to give rise to the genetic diversity seen in the modern human population. This implicitly assumes Adam and Eve would have been created without internal genetic diversity. If this were true, all observed variations would have to arise recently via random mutations. This would require incredibly high mutation rates, logically leading to rapid extinction.
Yet, Adam and Eve could have been created massively heterozygous. We have argued for over a decade that they could have been created with “designed diversity”. We have previously shown that a vast amount of genetic variation could have been pre-programmed into their genomes. This could logically provide the genetic basis for: 1) our human gifts and talents; 2) the many forms of human beauty; and 3) the various ways people have rapidly adapted to new habitats.
It is also claimed that the currently observed human allele frequency patterns could not arise from a single couple. The logic here is that, since there were only four sets of chromosomes in Eden, all variants would have had an initial frequency of either 25%, 50%, or 75%. Today, most allelic variants have frequencies in the range of 0–10%. Therefore, it is claimed that observed human diversity disproves a literal Adam and Eve.
In this paper we have critically examined these arguments. Our analyses highlight several genetic mechanisms that can help reconcile a literal Adam and Eve with the human allele frequency distributions seen today. We use numerical simulation to show that two people, if they contain designed alleles, can in fact give rise to allele frequency distributions of the very same type as are now seen in modern man.
We cannot know how God created Adam and Eve, nor exactly how Adam and Eve gave rise to the current human population. However, the genetic argument that there is no way that a literal Adam and Eve could have given rise to the observed human allele frequencies is clearly over-reaching and appears to be theologically reckless. There is no compelling reason to reject Adam and Eve based on modern allele frequencies
Volcanic Stratigraphy and Age Model of the Kimama Deep Borehole (Project Hotspot): Evidence for 5.8 Million Years of Continuous Basalt Volcanism, Central Snake River Plain, Idaho
The Snake River Plain of central Idaho represents the world’s best example of a mantle hotspot track impinging upon continental crust and provides a record of bimodal volcanism extending over 12 Ma to the present. Project Hotspot recovered almost 2 km of continuous drill core from the Kimama borehole, located in central Idaho on the axial volcanic zone. The Kimama drill core represents the most complete record of mafic volcanism along the Yellowstone–Snake River Plain hotspot track.
A total of 432 basalt flow units, representing 183 basalt flows, 78 basalt flow groups, and 34 super groups, along with 42 sediment interbeds are recognized using volcanic facies observations, stratigraphic relationships, borehole geophysical logs, and paleosecular variation in magnetostratigraphy. Rhyolite and other non-basaltic volcanic materials were not encountered in the drill core.
Ages for six basalt lava flows were determined by 40Ar/39Ar using incremental heating experiments. Paleomagnetic inclination was measured on over 1200 samples collected at roughly 2-m-depth intervals, yielding mean values of paleosecular variation between ±50° to ±70° in Kimama flow groups, close to the expected 61° axial dipole average for the Kimama borehole location. Twenty-three magnetic reversals were identified and correlated to dated geomagnetic chrons and subchrons and compared with the 40Ar/39Ar radiometric ages. A linear fit to 40Ar/39Ar dates, geomagnetic chron and subchron boundaries, and volcanogenic zircon U-Pb ages defines a mean accumulation rate of ∼320 m/m.y. and extrapolates to a bottom hole age of 6.3 Ma.
Average thicknesses of lithologic units increase from 2.7 m (sediment), 4 m (flow units), 10 m (flows), 23 m (flow groups), to 53 m (super groups). On average, one lava flow inundated the Kimama borehole location every 33 k.y. Intercalated sediments, ranging from 0.06 to 24.5 m thick, make up roughly 6% of the drill core and indicate lulls in local volcanic activity that may have lasted up to 77 k.y. Neutron and gamma-ray logs supplement observations from the drill cores: neutron logs document individual flow units through the contrast between massive flow interiors and more porous flow surfaces, and gamma-ray logs document the depth and thickness of sedimentary interbeds and high–K-Fe basalts. The 5.8 m.y. duration of basaltic volcanism in the Kimama drill core implies a steady rate of volcanism, indicating a relatively stable rate of mantle upflow along the lithosphere-mantle boundary in the wake of Yellowstone–Snake River Plain plume volcanism
Draft genome sequence of the blaOXA-436- and blaNDM-1-harboring Shewanella putrefaciens SA70 isolate
ABSTRACT
We sequenced a carbapenem-resistant
Shewanella putrefaciens
isolate cultured from the sink handle of a Pakistan hospital room. Assembly annotation indicates that the isolate has a chromosomal
bla
OXA-436
carbapenemase and a plasmid-borne
bla
NDM-1
gene. To our knowledge, this is the first report of a
Shewanella
species harboring
bla
NDM
.
</jats:p
Superficieibacter electus gen. nov., sp. nov., an extended-spectrum β-lactamase possessing member of the enterobacteriaceae family, isolated from Intensive Care Unit surfaces
<p>Two Gram-negative bacilli strains, designated BP-1(T) and BP-2, were recovered from two different Intensive Care Unit surfaces during a longitudinal survey in Pakistan. Both strains were unidentified using the bioMerieux VITEK MS IVD v2.3.3 and Bruker BioTyper MALDI-TOF mass spectrometry platforms. To more precisely determine the taxonomic identity of BP-1(T) and BP-2, we employed a biochemical and phylogenomic approach. The 16S rRNA gene sequence of strain BP-1(T) had the highest identity to Citrobacter farmeri CDC 2991-81(T) (98.63%) Citrobacter amalonaticus CECT 863(T) (98.56%), Citrobacter sedlakii NBRC 105722(T) (97.74%) and Citrobacter rodentium NBRC 105723(T) (97.74%). The biochemical utilization scheme of BP-1(T) using the Analytic Profile Index for Enterobacteriaceae (API20E) indicated its enzymatic functions are unique within the Enterobacteriaceae but most closely resemble Kluyvera spp., Enterobacter cloacae and Citrobacter koseri/farmeri. Phylogenomic analysis of the shared genes between BP-1(T), BP-2 and type strains from Kluyvera, Citrobacter, Escherichia, Salmonella, Kosakonia, Siccibacter and Shigella indicate that BP-1(T) and BP-2 isolates form a distinct branch from these genera. Average Nucleotide Identity analysis indicates that BP-1(T) and BP-2 are the same species. The biochemical and phylogenomic analysis indicate strains BP-1(T) and BP-2 represent a novel species from a new genus within the Enterobacteriaceae family, for which the name Superficieibacter electus gen. nov., sp. nov., is proposed. The type strain is BP-1(T) (= ATCC BAA-2937, = NBRC 113412).</p
Tertiary halo and tertiary background in the low luminosity experimental insertion IR8 of the LHC
In our report we present the results for numerical simulation of tertiary halo and tertiary background in the LHC. We study the case of the proton losses in the betatron cleaning insertion IR7 with the subsequent tertiary halo generation in the downstream experimental insertion IR8. We analyze the formation of tertiary background in the experimental area of the IR8 and evaluate the performance of the machine-detector interface shielding with respect to this source of the background. The results obtained are compared with the previous estimates of the machine-induced background in the low luminosity insertions of the LHC, and the balance between different sources of the background is discussed
Comparison of boreal ecosystem model sensitivity to variability in climate and forest site parameters
Ecosystem models are useful tools for evaluating environmental controls on carbon and water cycles under past or future conditions. In this paper we compare annual carbon and water fluxes from nine boreal spruce forest ecosystem models in a series of sensitivity simulations. For each comparison, a single climate driver or forest site parameter was altered in a separate sensitivity run. Driver and parameter changes were prescribed principally to be large enough to identify and isolate any major differences in model responses, while also remaining within the range of variability that the boreal forest biome may be exposed to over a time period of several decades. The models simulated plant production, autotrophic and heterotrophic respiration, and evapotranspiration (ET) for a black spruce site in the boreal forest of central Canada (56°N). Results revealed that there were common model responses in gross primary production, plant respiration, and ET fluxes to prescribed changes in air temperature or surface irradiance and to decreased precipitation amounts. The models were also similar in their responses to variations in canopy leaf area, leaf nitrogen content, and surface organic layer thickness. The models had different sensitivities to certain parameters, namely the net primary production response to increased CO2 levels, and the response of soil microbial respiration to precipitation inputs and soil wetness. These differences can be explained by the type (or absence) of photosynthesis-CO2 response curves in the models and by response algorithms of litter and humus decomposition to drying effects in organic soils of the boreal spruce ecosystem. Differences in the couplings of photosynthesis and soil respiration to nitrogen availability may also explain divergent model responses. Sensitivity comparisons imply that past conditions of the ecosystem represented in the models\u27 initial standing wood and soil carbon pools, including historical climate patterns and the time since the last major disturbance, can be as important as potential climatic changes to prediction of the annual ecosystem carbon balance in this boreal spruce forest
Genomic characterization of antibiotic resistant Escherichia coli isolated from domestic chickens in Pakistan
Poultry husbandry is important for the economic health of Pakistan, but the Pakistani poultry industry is negatively impacted by infections fro
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Boreal forest CO2 exchange and evapotranspiration predicted by nine ecosystem process models: Intermodel comparisons and relationships to field measurements
Nine ecosystem process models were used to predict CO2 and water vapor exchanges by a 150-year-old black spruce forest in central Canada during 1994–1996 to evaluate and improve the models. Three models had hourly time steps, five had daily time steps, and one had monthly time steps. Model input included site ecosystem characteristics and meteorology. Model predictions were compared to eddy covariance (EC) measurements of whole-ecosystem CO2exchange and evapotranspiration, to chamber measurements of nighttime moss-surface CO2release, and to ground-based estimates of annual gross primary production, net primary production, net ecosystem production (NEP), plant respiration, and decomposition. Model-model differences were apparent for all variables. Model-measurement agreement was good in some cases but poor in others. Modeled annual NEP ranged from −11 g C m−2 (weak CO2source) to 85 g C m−2 (moderate CO2 sink). The models generally predicted greater annual CO2sink activity than measured by EC, a discrepancy consistent with the fact that model parameterizations represented the more productive fraction of the EC tower “footprint.” At hourly to monthly timescales, predictions bracketed EC measurements so median predictions were similar to measurements, but there were quantitatively important model-measurement discrepancies found for all models at subannual timescales. For these models and input data, hourly time steps (and greater complexity) compared to daily time steps tended to improve model-measurement agreement for daily scale CO2 exchange and evapotranspiration (as judged by root-mean-squared error). Model time step and complexity played only small roles in monthly to annual predictions
Revisiting the proposed planetary system orbiting the eclipsing polar HU Aquarii
It has recently been proposed, on the basis of eclipse-timing data, that the
eclipsing polar cataclysmic variable HU Aquarii is host to at least two giant
planets. However, that result has been called into question based upon the
dynamical stability of the proposed planets. In this work, we present a
detailed re-analysis of all eclipse timing data available for the HU Aquarii
system, making use of standard techniques used to fit orbits to radial-velocity
data. We find that the eclipse timings can be used to obtain a two-planet
solution that does not require the presence of additional bodies within the
system. We then perform a highly detailed dynamical analysis of the proposed
planetary system. We show that the improved orbital parameters we have derived
correspond to planets that are dynamically unstable on unfeasibly short
timescales (of order 10^4 years or less). Given these results, we discuss
briefly how the observed signal might in fact be the result of the intrinsic
properties of the eclipsing polar, rather than being evidence of dynamically
improbable planets. Taken in concert, our results highlight the need for
caution in interpreting such timing variations as being planetary in nature.Comment: Accepted for publication in MNRA
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